RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 CCDC88AQ3V6T2 1871 aa19.8■□□□□ 0.76
CPSF4-201ENST00000292476 LRRC37AA6NMS7 1700 aa19.8■□□□□ 0.76
CPSF4-201ENST00000292476 C6orf229H3BNL8 230 aa19.8■□□□□ 0.76
CPSF4-201ENST00000292476 ZMYM6O95789 1325 aa19.8■□□□□ 0.76
CPSF4-201ENST00000292476 CYP21A2P08686 494 aa19.8■□□□□ 0.76
CPSF4-201ENST00000292476 KLRK1P26718 216 aa19.8■□□□□ 0.76
CPSF4-201ENST00000292476 MPNDQ8N594 471 aa19.8■□□□□ 0.76
CPSF4-201ENST00000292476 NEK1Q96PY6 1258 aa19.8■□□□□ 0.76
CPSF4-201ENST00000292476 STRBPQ96SI9 672 aaKnown RBP19.8■□□□□ 0.76
CPSF4-201ENST00000292476 NACAP1Q9BZK3 213 aa19.8■□□□□ 0.76
CPSF4-201ENST00000292476 RBSNQ9H1K0 784 aa19.8■□□□□ 0.76
CPSF4-201ENST00000292476 RNF181Q9P0P0 153 aa19.8■□□□□ 0.76
CPSF4-201ENST00000292476 PATL2C9JE40 543 aaKnown RBP19.79■□□□□ 0.76
CPSF4-201ENST00000292476 STX6O43752 255 aa19.79■□□□□ 0.76
CPSF4-201ENST00000292476 CYP7A1P22680 504 aa19.79■□□□□ 0.76
CPSF4-201ENST00000292476 PRELPP51888 382 aa19.79■□□□□ 0.76
CPSF4-201ENST00000292476 ALX1Q15699 326 aa19.79■□□□□ 0.76
CPSF4-201ENST00000292476 CSPP1Q1MSJ5 1256 aa19.79■□□□□ 0.76
CPSF4-201ENST00000292476 ADCK5Q3MIX3 580 aa19.79■□□□□ 0.76
CPSF4-201ENST00000292476 GRIPAP1Q4V328 841 aa19.79■□□□□ 0.76
CPSF4-201ENST00000292476 CC2D2BQ6DHV5 1058 aa19.79■□□□□ 0.76
CPSF4-201ENST00000292476 ZNF784Q8NCA9 323 aaPredicted RBP19.79■□□□□ 0.76
CPSF4-201ENST00000292476 EYA3Q99504 573 aa19.79■□□□□ 0.76
CPSF4-201ENST00000292476 RBM27Q9P2N5 1060 aaKnown RBP19.79■□□□□ 0.76
CPSF4-201ENST00000292476 IL1R1P14778 569 aa19.78■□□□□ 0.76
CPSF4-201ENST00000292476 CCDC93Q567U6 631 aa19.78■□□□□ 0.76
CPSF4-201ENST00000292476 SOGA3Q5TF21 947 aa19.78■□□□□ 0.76
CPSF4-201ENST00000292476 NAA16Q6N069 864 aaPredicted RBP19.78■□□□□ 0.76
CPSF4-201ENST00000292476 TXNRD3Q86VQ6 643 aa19.78■□□□□ 0.76
CPSF4-201ENST00000292476 DUOX1Q9NRD9 1551 aa19.78■□□□□ 0.76
CPSF4-201ENST00000292476 ZNF213O14771 459 aa19.78■□□□□ 0.76
CPSF4-201ENST00000292476 FGAP02671 866 aa19.78■□□□□ 0.76
CPSF4-201ENST00000292476 APPP05067 770 aa19.78■□□□□ 0.76
CPSF4-201ENST00000292476 RPS6KB1P23443 525 aa19.78■□□□□ 0.76
CPSF4-201ENST00000292476 FOXD4L5Q5VV16 416 aaPredicted RBP19.78■□□□□ 0.76
CPSF4-201ENST00000292476 DPP8Q6V1X1 898 aaPredicted RBP19.78■□□□□ 0.76
CPSF4-201ENST00000292476 FOXD4L4Q8WXT5 416 aaPredicted RBP19.78■□□□□ 0.76
CPSF4-201ENST00000292476 ZC3H12CQ9C0D7 883 aaKnown RBP19.78■□□□□ 0.76
CPSF4-201ENST00000292476 COA1Q9GZY4 146 aa19.78■□□□□ 0.76
CPSF4-201ENST00000292476 TAOK3Q9H2K8 898 aa19.78■□□□□ 0.76
CPSF4-201ENST00000292476 CD209Q9NNX6 404 aa19.78■□□□□ 0.76
CPSF4-201ENST00000292476 COL1A1P02452 1464 aaPredicted RBP19.77■□□□□ 0.76
CPSF4-201ENST00000292476 LETM1O95202 739 aaPredicted RBP19.77■□□□□ 0.76
CPSF4-201ENST00000292476 SYT1P21579 422 aa19.77■□□□□ 0.76
CPSF4-201ENST00000292476 GSTO1P78417 241 aa19.77■□□□□ 0.76
CPSF4-201ENST00000292476 CHAF1AQ13111 956 aaPredicted RBP19.77■□□□□ 0.76
CPSF4-201ENST00000292476 TBC1D22AQ8WUA7 517 aa19.77■□□□□ 0.76
CPSF4-201ENST00000292476 POLLQ9UGP5 575 aa19.77■□□□□ 0.76
CPSF4-201ENST00000292476 MYH13Q9UKX3 1938 aa19.76■□□□□ 0.75
CPSF4-201ENST00000292476 MAGEB6P1A0A0J9YX57 407 aa19.76■□□□□ 0.75
CPSF4-201ENST00000292476 SYCE3A1L190 88 aa19.76■□□□□ 0.75
CPSF4-201ENST00000292476 MBD4O95243 580 aa19.76■□□□□ 0.75
CPSF4-201ENST00000292476 F13A1P00488 732 aa19.76■□□□□ 0.75
CPSF4-201ENST00000292476 LMNB1P20700 586 aa19.76■□□□□ 0.75
CPSF4-201ENST00000292476 ZSCAN30Q86W11 494 aa19.76■□□□□ 0.75
CPSF4-201ENST00000292476 CERS3Q8IU89 383 aa19.76■□□□□ 0.75
CPSF4-201ENST00000292476 ZNF526Q8TF50 670 aaPredicted RBP19.76■□□□□ 0.75
CPSF4-201ENST00000292476 USP48Q86UV5 1035 aa19.75■□□□□ 0.75
CPSF4-201ENST00000292476 NSUN4Q96CB9 384 aaKnown RBP19.75■□□□□ 0.75
CPSF4-201ENST00000292476 LDHBP07195 334 aaKnown RBP19.75■□□□□ 0.75
CPSF4-201ENST00000292476 LDHCP07864 332 aa19.75■□□□□ 0.75
CPSF4-201ENST00000292476 UBE2HP62256 183 aa19.75■□□□□ 0.75
CPSF4-201ENST00000292476 DZIP1Q86YF9 867 aaKnown RBP19.75■□□□□ 0.75
CPSF4-201ENST00000292476 FAM184AQ8NB25 1140 aa19.75■□□□□ 0.75
CPSF4-201ENST00000292476 NAPBQ9H115 298 aa19.75■□□□□ 0.75
CPSF4-201ENST00000292476 TSPY26PQ9H489 355 aa19.75■□□□□ 0.75
CPSF4-201ENST00000292476 E7EWF7 191 aa19.74■□□□□ 0.75
CPSF4-201ENST00000292476 TRDNQ13061 729 aa19.74■□□□□ 0.75
CPSF4-201ENST00000292476 DHX32Q7L7V1 743 aaKnown RBP19.74■□□□□ 0.75
CPSF4-201ENST00000292476 SLF2Q8IX21 1173 aa19.74■□□□□ 0.75
CPSF4-201ENST00000292476 RTKN2Q8IZC4 609 aa19.74■□□□□ 0.75
CPSF4-201ENST00000292476 CHMP4CQ96CF2 233 aa19.74■□□□□ 0.75
CPSF4-201ENST00000292476 CHAMP1Q96JM3 812 aa19.74■□□□□ 0.75
CPSF4-201ENST00000292476 SLC4A4Q9Y6R1 1079 aa19.74■□□□□ 0.75
CPSF4-201ENST00000292476 LTBP3Q9NS15 1303 aa19.73■□□□□ 0.75
CPSF4-201ENST00000292476 MYO5AQ9Y4I1 1855 aaKnown RBP19.73■□□□□ 0.75
CPSF4-201ENST00000292476 LTBP1Q14766 1721 aa19.73■□□□□ 0.75
CPSF4-201ENST00000292476 FOXP2O15409 715 aa19.73■□□□□ 0.75
CPSF4-201ENST00000292476 MECOMQ03112 1051 aa19.73■□□□□ 0.75
CPSF4-201ENST00000292476 CCDC183Q5T5S1 534 aa19.73■□□□□ 0.75
CPSF4-201ENST00000292476 IFNL3Q8IZI9 196 aa19.73■□□□□ 0.75
CPSF4-201ENST00000292476 ARMT1Q9H993 441 aa19.73■□□□□ 0.75
CPSF4-201ENST00000292476 TIAM2Q8IVF5 1701 aa19.73■□□□□ 0.75
CPSF4-201ENST00000292476 SNED1Q8TER0 1413 aa19.72■□□□□ 0.75
CPSF4-201ENST00000292476 G3V3G9 751 aa19.72■□□□□ 0.75
CPSF4-201ENST00000292476 PDCP20941 246 aa19.72■□□□□ 0.75
CPSF4-201ENST00000292476 GJB2P29033 226 aa19.72■□□□□ 0.75
CPSF4-201ENST00000292476 DCAF8Q5TAQ9 597 aa19.72■□□□□ 0.75
CPSF4-201ENST00000292476 GIMAP6Q6P9H5 292 aa19.72■□□□□ 0.75
CPSF4-201ENST00000292476 SUPT20HQ8NEM7 779 aa19.72■□□□□ 0.75
CPSF4-201ENST00000292476 NOL10Q9BSC4 688 aaKnown RBP19.72■□□□□ 0.75
CPSF4-201ENST00000292476 ZNF277Q9NRM2 450 aaPredicted RBP19.72■□□□□ 0.75
CPSF4-201ENST00000292476 SUGT1Q9Y2Z0 365 aa19.72■□□□□ 0.75
CPSF4-201ENST00000292476 LARGE1O95461 756 aa19.71■□□□□ 0.75
CPSF4-201ENST00000292476 FGD1P98174 961 aa19.71■□□□□ 0.75
CPSF4-201ENST00000292476 UVSSAQ2YD98 709 aa19.71■□□□□ 0.75
CPSF4-201ENST00000292476 RALYLQ86SE5 291 aaKnown RBP19.71■□□□□ 0.75
CPSF4-201ENST00000292476 CCDC83Q8IWF9 413 aa19.71■□□□□ 0.75
CPSF4-201ENST00000292476 NCOA7Q8NI08 942 aa19.71■□□□□ 0.75
CPSF4-201ENST00000292476 FAM205AQ6ZU69 1335 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms