RNA–Protein interactions for RNA: ENST00000283228.6

PTPRR-201, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRR, Length 3,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-201ENST00000283228 PFKFB2O60825 505 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 ATP2C2O75185 946 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 PDE6BP35913 854 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 MAP9Q49MG5 647 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 ANO1Q5XXA6 986 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 CCDC102BQ68D86 513 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 DONSONQ9NYP3 566 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 PCDHA5Q9Y5H7 936 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 MYO1FO00160 1098 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 IKBKBO14920 756 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 MRPS25P82663 173 aaKnown RBP12.97□□□□□ -0.33
PTPRR-201ENST00000283228 MYSM1Q5VVJ2 828 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 CEP89Q96ST8 783 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 KAT14Q9H8E8 782 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 RTEL1Q9NZ71 1219 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 KCNG1Q9UIX4 513 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 CTDNEP1O95476 244 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 PIP4K2BP78356 416 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 LRCH2Q5VUJ6 765 aa12.97□□□□□ -0.33
PTPRR-201ENST00000283228 SUGP1Q8IWZ8 645 aaKnown RBP12.97□□□□□ -0.33
PTPRR-201ENST00000283228 COBLO75128 1261 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 RXRAP19793 462 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 GGCXP38435 758 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 CDR1P51861 262 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 TC2NQ8N9U0 490 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 N4BP2L2Q92802 583 aaPredicted RBP12.96□□□□□ -0.33
PTPRR-201ENST00000283228 SAMSN1Q9NSI8 373 aaKnown RBP12.96□□□□□ -0.33
PTPRR-201ENST00000283228 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.96□□□□□ -0.33
PTPRR-201ENST00000283228 METP08581 1390 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 CDK12Q9NYV4 1490 aaPredicted RBP12.96□□□□□ -0.33
PTPRR-201ENST00000283228 A0A1W2PQ27 194 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 A0A1W2PQ64 194 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 A0A1W2PQD8 194 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 FOXN1O15353 648 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 ATP1A2P50993 1020 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 KCNB2Q92953 911 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 SLF1Q9BQI6 1058 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 LLPHQ9BRT6 129 aaKnown RBP12.96□□□□□ -0.33
PTPRR-201ENST00000283228 CD248Q9HCU0 757 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 ATP7BP35670 1465 aa12.96□□□□□ -0.33
PTPRR-201ENST00000283228 ACTN3Q08043 901 aaPredicted RBP12.96□□□□□ -0.34
PTPRR-201ENST00000283228 NOC3LQ8WTT2 800 aaKnown RBP12.96□□□□□ -0.34
PTPRR-201ENST00000283228 KLF18A0A0U1RQI7 1052 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 CCDC196A0A1B0GTZ2 297 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 JMYQ8N9B5 988 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 BPIFA3Q9BQP9 254 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 PDE4BQ07343 736 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 ATL3Q6DD88 541 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 RBM33Q96EV2 1170 aaKnown RBP12.95□□□□□ -0.34
PTPRR-201ENST00000283228 SCLT1Q96NL6 688 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 NUP88Q99567 741 aaPredicted RBP12.95□□□□□ -0.34
PTPRR-201ENST00000283228 CAPS2Q9BXY5 557 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 PTPRMP28827 1452 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 CCT6AP40227 531 aaKnown RBP12.95□□□□□ -0.34
PTPRR-201ENST00000283228 BEND3Q5T5X7 828 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 RAD9BQ6WBX8 426 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 STOX1Q6ZVD7 989 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 ILDR1Q86SU0 546 aaPredicted RBP12.95□□□□□ -0.34
PTPRR-201ENST00000283228 GRAMD1CQ8IYS0 662 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 CTCFLQ8NI51 663 aaPredicted RBP12.95□□□□□ -0.34
PTPRR-201ENST00000283228 EYA1Q99502 592 aa12.95□□□□□ -0.34
PTPRR-201ENST00000283228 ARHGEF28Q8N1W1 1705 aaKnown RBP12.94□□□□□ -0.34
PTPRR-201ENST00000283228 MAP2P11137 1827 aaKnown RBP12.94□□□□□ -0.34
PTPRR-201ENST00000283228 A0A0G2JLW4 131 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 GOLGA6BA6NDN3 693 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 GOLIM4O00461 696 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 SRGAP2O75044 1071 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 SASH1O94885 1247 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 RBL2Q08999 1139 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 MCMDC2Q4G0Z9 681 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 FILIP1LQ4L180 1135 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 CPLX2Q6PUV4 134 aaKnown RBP12.94□□□□□ -0.34
PTPRR-201ENST00000283228 TICAM2Q86XR7 235 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 POTEDQ86YR6 584 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 SMARCC2Q8TAQ2 1214 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.94□□□□□ -0.34
PTPRR-201ENST00000283228 CARMIL3Q8ND23 1372 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 TEX33O43247 280 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 PDIA3P30101 505 aaKnown RBP12.94□□□□□ -0.34
PTPRR-201ENST00000283228 TRDNQ13061 729 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 WASHC4Q2M389 1173 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 KIRREL3Q8IZU9 778 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 ZNF526Q8TF50 670 aaPredicted RBP12.94□□□□□ -0.34
PTPRR-201ENST00000283228 HNRNPLLQ8WVV9 542 aaKnown RBP12.94□□□□□ -0.34
PTPRR-201ENST00000283228 CABS1Q96KC9 395 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 HDAC6Q9UBN7 1215 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 ADGRG1Q9Y653 693 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 CRB1P82279 1406 aa12.94□□□□□ -0.34
PTPRR-201ENST00000283228 TRIM29Q14134 588 aa12.93□□□□□ -0.34
PTPRR-201ENST00000283228 KCTD16Q68DU8 428 aa12.93□□□□□ -0.34
PTPRR-201ENST00000283228 CCDC70Q6NSX1 233 aa12.93□□□□□ -0.34
PTPRR-201ENST00000283228 SND1Q7KZF4 910 aaKnown RBP eCLIP12.93□□□□□ -0.34
PTPRR-201ENST00000283228 AIFM3Q96NN9 605 aa12.93□□□□□ -0.34
PTPRR-201ENST00000283228 INTS13Q9NVM9 706 aa12.93□□□□□ -0.34
PTPRR-201ENST00000283228 MYO6Q9UM54 1294 aa12.93□□□□□ -0.34
PTPRR-201ENST00000283228 YEATS4O95619 227 aa12.93□□□□□ -0.34
PTPRR-201ENST00000283228 CMA1P23946 247 aa12.93□□□□□ -0.34
PTPRR-201ENST00000283228 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.93□□□□□ -0.34
PTPRR-201ENST00000283228 NEURL4Q96JN8 1562 aa12.93□□□□□ -0.34
PTPRR-201ENST00000283228 KCNQ3O43525 872 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms