RNA–Protein interactions for RNA: ENST00000278616.8

ATM-201, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATM, Length 13,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-201ENST00000278616 STX10O60499 249 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 IGHDP01880 384 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 CALM1P0DP23 149 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 CALM2P0DP24 149 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 CALM3P0DP25 149 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 RAPGEF1Q13905 1077 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 DBN1Q16643 649 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 BRAPQ7Z569 592 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 CC2D2AQ9P2K1 1620 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 PEX19P40855 299 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 PAK2Q13177 524 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 MPRIPQ6WCQ1 1025 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 WAPLQ7Z5K2 1190 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.34□□□□□ -1.07
ATM-201ENST00000278616 SDCCAG3Q96C92 435 aa8.34□□□□□ -1.07
ATM-201ENST00000278616 MRRFQ96E11 262 aaKnown RBP8.34□□□□□ -1.07
ATM-201ENST00000278616 PHLDB3Q6NSJ2 640 aa8.34□□□□□ -1.08
ATM-201ENST00000278616 ESR2Q92731 530 aa8.34□□□□□ -1.08
ATM-201ENST00000278616 ANKFY1Q9P2R3 1169 aa8.34□□□□□ -1.08
ATM-201ENST00000278616 FAF1Q9UNN5 650 aaPredicted RBP8.34□□□□□ -1.08
ATM-201ENST00000278616 CFTRP13569 1480 aa8.34□□□□□ -1.08
ATM-201ENST00000278616 GAPVD1Q14C86 1478 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 TBC1D8O95759 1140 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 TAF7Q15545 349 aaPredicted RBP8.33□□□□□ -1.08
ATM-201ENST00000278616 RBSNQ9H1K0 784 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 SF3A3Q12874 501 aaKnown RBP eCLIP8.33□□□□□ -1.085e-8■■■■■ 46.9
ATM-201ENST00000278616 LGSNQ5TDP6 509 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 ATL3Q6DD88 541 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 EFCAB5A4FU69 1503 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 KLF18A0A0U1RQI7 1052 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 U2AF2P26368 475 aaKnown RBP eCLIP8.33□□□□□ -1.082e-7■■■■□ 21.3
ATM-201ENST00000278616 GNAQP50148 359 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 TCEANC2Q96MN5 208 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 NOX5Q96PH1 765 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 IMPACTQ9P2X3 320 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 C9orf84Q5VXU9 1444 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 TRIM27P14373 513 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 RPL13P26373 211 aaKnown RBP8.33□□□□□ -1.08
ATM-201ENST00000278616 AMOTQ4VCS5 1084 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 KRT3P12035 628 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 TAF12Q16514 161 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 PARP2Q9UGN5 583 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 CFAP221Q4G0U5 840 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 LARSQ9P2J5 1176 aaKnown RBP8.33□□□□□ -1.08
ATM-201ENST00000278616 KRT15P19012 456 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 NUCB1Q02818 461 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 STAG1Q8WVM7 1258 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 EIF2AQ9BY44 585 aaKnown RBP8.33□□□□□ -1.08
ATM-201ENST00000278616 AFG3L2Q9Y4W6 797 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 ZGPATQ8N5A5 531 aaKnown RBP8.33□□□□□ -1.08
ATM-201ENST00000278616 NAPAP54920 295 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 GABPAQ06546 454 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 RPS6KA2Q15349 733 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 MYRIPQ8NFW9 859 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 SYNJ2O15056 1496 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 PHEXP78562 749 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 ZKSCAN3Q9BRR0 538 aa8.33□□□□□ -1.08
ATM-201ENST00000278616 TRMT112Q9UI30 125 aaKnown RBP8.33□□□□□ -1.08
ATM-201ENST00000278616 DAPK3O43293 454 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 DHX58Q96C10 678 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 CDC5LQ99459 802 aaKnown RBP8.32□□□□□ -1.08
ATM-201ENST00000278616 ZSCAN26Q16670 478 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 WDR44Q5JSH3 913 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 LRRD1A4D1F6 860 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 TROVE2P10155 538 aaKnown RBP eCLIP8.32□□□□□ -1.083e-6■■□□□ 11.8
ATM-201ENST00000278616 EPB41P11171 864 aaKnown RBP8.32□□□□□ -1.08
ATM-201ENST00000278616 RAB17Q9H0T7 212 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 PRDM11Q9NQV5 511 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 LDHCP07864 332 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 PPP1R2P41236 205 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 RTL9Q8NET4 1388 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 MYL5Q02045 173 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 ASIC3Q9UHC3 531 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 ARHGAP4P98171 946 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 PROCA1Q8NCQ7 364 aaPredicted RBP8.32□□□□□ -1.08
ATM-201ENST00000278616 ATP5J2-PTCD1G3V325 749 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 RNF40O75150 1001 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 LIN9Q5TKA1 542 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 SPDL1Q96EA4 605 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 RABEP2Q9H5N1 569 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 ELP1O95163 1332 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 ANXA1P04083 346 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 NBPF6Q5VWK0 638 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 CCDC125Q86Z20 511 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 PSPC1Q8WXF1 523 aaKnown RBP8.32□□□□□ -1.08
ATM-201ENST00000278616 NBPF4Q96M43 638 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 EPS15L1Q9UBC2 864 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 ORC6Q9Y5N6 252 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 KRT9P35527 623 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 MAP3K7CLP57077 242 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 GPIHBP1Q8IV16 184 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 TACO1Q9BSH4 297 aaKnown RBP8.32□□□□□ -1.08
ATM-201ENST00000278616 RIPOR2Q9Y4F9 1068 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 CASKIN1Q8WXD9 1431 aa8.32□□□□□ -1.08
ATM-201ENST00000278616 PAXIP1Q6ZW49 1069 aaPredicted RBP8.31□□□□□ -1.08
ATM-201ENST00000278616 DBF4Q9UBU7 674 aaPredicted RBP8.31□□□□□ -1.08
ATM-201ENST00000278616 SYNRGQ9UMZ2 1314 aa8.31□□□□□ -1.08
ATM-201ENST00000278616 APOEP02649 317 aa8.31□□□□□ -1.08
ATM-201ENST00000278616 NCAPD3P42695 1498 aa8.31□□□□□ -1.08
ATM-201ENST00000278616 OAS2P29728 719 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms