RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 LUZP1Q86V48 1076 aa15.1■□□□□ 0.01
C9orf3-201ENST00000277198 CKAP2LQ8IYA6 745 aa15.1■□□□□ 0.01
C9orf3-201ENST00000277198 NEUROD6Q96NK8 337 aa15.1■□□□□ 0.01
C9orf3-201ENST00000277198 UTP14AQ9BVJ6 771 aaKnown RBP15.1■□□□□ 0.01
C9orf3-201ENST00000277198 CTNNA3Q9UI47 895 aa15.1■□□□□ 0.01
C9orf3-201ENST00000277198 CHMP3Q9Y3E7 222 aa15.1■□□□□ 0.01
C9orf3-201ENST00000277198 ANKRD36CQ5JPF3 1778 aa15.09■□□□□ 0.01
C9orf3-201ENST00000277198 IFIT1P09914 478 aaKnown RBP15.09■□□□□ 0.01
C9orf3-201ENST00000277198 NPR1P16066 1061 aa15.09■□□□□ 0.01
C9orf3-201ENST00000277198 CRY2Q49AN0 593 aa15.09■□□□□ 0.01
C9orf3-201ENST00000277198 SARM1Q6SZW1 724 aa15.09■□□□□ 0.01
C9orf3-201ENST00000277198 RNF181Q9P0P0 153 aa15.09■□□□□ 0.01
C9orf3-201ENST00000277198 PTPDC1A2A3K4 754 aa15.09■□□□□ 0.01
C9orf3-201ENST00000277198 E7EWF7 191 aa15.09■□□□□ 0.01
C9orf3-201ENST00000277198 ZNF75DP51815 510 aa15.09■□□□□ 0.01
C9orf3-201ENST00000277198 C7orf43Q8WVR3 580 aa15.09■□□□□ 0.01
C9orf3-201ENST00000277198 ISCA1Q9BUE6 129 aa15.09■□□□□ 0.01
C9orf3-201ENST00000277198 NDUFB9Q9Y6M9 179 aa15.09■□□□□ 0.01
C9orf3-201ENST00000277198 CTDNEP1O95476 244 aa15.08■□□□□ 0
C9orf3-201ENST00000277198 MPNDQ8N594 471 aa15.08■□□□□ 0
C9orf3-201ENST00000277198 CNKSR1Q969H4 720 aa15.08■□□□□ 0
C9orf3-201ENST00000277198 DDX11Q96FC9 970 aa15.08■□□□□ 0
C9orf3-201ENST00000277198 AKAP2Q9Y2D5 859 aa15.08■□□□□ 0
C9orf3-201ENST00000277198 A0A1B0GUL7 405 aa15.07■□□□□ 0
C9orf3-201ENST00000277198 TIMM10P62072 90 aa15.07■□□□□ 0
C9orf3-201ENST00000277198 TRIM28Q13263 835 aaKnown RBP15.07■□□□□ 0
C9orf3-201ENST00000277198 HSP90AB3PQ58FF7 597 aa15.07■□□□□ 0
C9orf3-201ENST00000277198 FAM89AQ96GI7 184 aa15.07■□□□□ 0
C9orf3-201ENST00000277198 TRIM5Q9C035 493 aa15.07■□□□□ 0
C9orf3-201ENST00000277198 TRMT112Q9UI30 125 aaKnown RBP15.07■□□□□ 0
C9orf3-201ENST00000277198 PYCARDQ9ULZ3 195 aa15.07■□□□□ 0
C9orf3-201ENST00000277198 MAST3O60307 1309 aa15.07■□□□□ 0
C9orf3-201ENST00000277198 DHX16O60231 1041 aaKnown RBP15.07■□□□□ 0
C9orf3-201ENST00000277198 NEMFO60524 1076 aa15.07■□□□□ 0
C9orf3-201ENST00000277198 PDIA3P30101 505 aaKnown RBP15.07■□□□□ 0
C9orf3-201ENST00000277198 STX1AQ16623 288 aa15.07■□□□□ 0
C9orf3-201ENST00000277198 CCDC158Q5M9N0 1113 aa15.07■□□□□ 0
C9orf3-201ENST00000277198 CCDC73Q6ZRK6 1079 aa15.07■□□□□ 0
C9orf3-201ENST00000277198 SPC24Q8NBT2 197 aa15.07■□□□□ 0
C9orf3-201ENST00000277198 CEP126Q9P2H0 1117 aa15.07■□□□□ 0
C9orf3-201ENST00000277198 APOBRQ0VD83 1088 aa15.06■□□□□ 0
C9orf3-201ENST00000277198 WDR19Q8NEZ3 1342 aa15.06■□□□□ 0
C9orf3-201ENST00000277198 SBF1O95248 1867 aa15.06■□□□□ 0
C9orf3-201ENST00000277198 CHGBP05060 677 aa15.05■□□□□ 0
C9orf3-201ENST00000277198 FAM160A1Q05DH4 1040 aa15.05■□□□□ 0
C9orf3-201ENST00000277198 CCAR1Q8IX12 1150 aaKnown RBP15.05■□□□□ 0
C9orf3-201ENST00000277198 RPGRQ92834 1020 aaKnown RBP15.05■□□□□ 0
C9orf3-201ENST00000277198 MRFAP1L1Q96HT8 127 aa15.05■□□□□ 0
C9orf3-201ENST00000277198 PLA2G12BQ9BX93 195 aa15.05■□□□□ 0
C9orf3-201ENST00000277198 DNAJC25Q9H1X3 360 aa15.05■□□□□ 0
C9orf3-201ENST00000277198 RIC1Q4ADV7 1423 aa15.05■□□□□ 0
C9orf3-201ENST00000277198 GOLGA6L19H0YKK7 550 aa15.05■□□□□ -0
C9orf3-201ENST00000277198 KINO60870 393 aaKnown RBP15.05■□□□□ -0
C9orf3-201ENST00000277198 PTGS1P23219 599 aa15.05■□□□□ -0
C9orf3-201ENST00000277198 IQCB1Q15051 598 aa15.05■□□□□ -0
C9orf3-201ENST00000277198 CCDC57Q2TAC2 916 aa15.05■□□□□ -0
C9orf3-201ENST00000277198 SLC10A5Q5PT55 438 aa15.05■□□□□ -0
C9orf3-201ENST00000277198 CCDC186Q7Z3E2 898 aa15.05■□□□□ -0
C9orf3-201ENST00000277198 ENGASEQ8NFI3 743 aa15.05■□□□□ -0
C9orf3-201ENST00000277198 LRRC2Q9BYS8 371 aa15.05■□□□□ -0
C9orf3-201ENST00000277198 ANO10Q9NW15 660 aa15.05■□□□□ -0
C9orf3-201ENST00000277198 COL4A1P02462 1669 aa15.05■□□□□ -0
C9orf3-201ENST00000277198 A0A1W2PQ27 194 aa15.04■□□□□ -0
C9orf3-201ENST00000277198 A0A1W2PQ64 194 aa15.04■□□□□ -0
C9orf3-201ENST00000277198 A0A1W2PQD8 194 aa15.04■□□□□ -0
C9orf3-201ENST00000277198 SNW1Q13573 536 aaKnown RBP15.04■□□□□ -0
C9orf3-201ENST00000277198 IMMTQ16891 758 aaKnown RBP15.04■□□□□ -0
C9orf3-201ENST00000277198 LRRC24Q50LG9 513 aa15.04■□□□□ -0
C9orf3-201ENST00000277198 DRC7Q8IY82 874 aa15.04■□□□□ -0
C9orf3-201ENST00000277198 C17orf53Q8N3J3 647 aaPredicted RBP15.04■□□□□ -0
C9orf3-201ENST00000277198 GPBP1L1Q9HC44 474 aaPredicted RBP15.04■□□□□ -0
C9orf3-201ENST00000277198 RTEL1Q9NZ71 1219 aa15.04■□□□□ -0
C9orf3-201ENST00000277198 LMNB1P20700 586 aa15.04■□□□□ -0
C9orf3-201ENST00000277198 HOXA10P31260 410 aaPredicted RBP15.04■□□□□ -0
C9orf3-201ENST00000277198 FER1L6Q2WGJ9 1857 aa15.04■□□□□ -0
C9orf3-201ENST00000277198 ADALQ6DHV7 355 aa15.04■□□□□ -0
C9orf3-201ENST00000277198 ZSCAN25Q6NSZ9 544 aa15.04■□□□□ -0
C9orf3-201ENST00000277198 NLRP3Q96P20 1036 aa15.04■□□□□ -0
C9orf3-201ENST00000277198 USP28Q96RU2 1077 aa15.04■□□□□ -0
C9orf3-201ENST00000277198 LAMB2P55268 1798 aa15.03■□□□□ -0
C9orf3-201ENST00000277198 NAT10Q9H0A0 1025 aaKnown RBP15.03■□□□□ -0
C9orf3-201ENST00000277198 NMRK2Q9NPI5 230 aa15.03■□□□□ -0
C9orf3-201ENST00000277198 CLIP2Q9UDT6 1046 aa15.03■□□□□ -0
C9orf3-201ENST00000277198 SNED1Q8TER0 1413 aa15.02■□□□□ -0
C9orf3-201ENST00000277198 TTC39AQ5SRH9 613 aa15.02■□□□□ -0
C9orf3-201ENST00000277198 APPBP2Q92624 585 aa15.02■□□□□ -0
C9orf3-201ENST00000277198 OSBP2Q969R2 916 aa15.02■□□□□ -0
C9orf3-201ENST00000277198 TAOK3Q9H2K8 898 aa15.02■□□□□ -0
C9orf3-201ENST00000277198 DDX60Q8IY21 1712 aaKnown RBP15.02■□□□□ -0
C9orf3-201ENST00000277198 M0R2C6 588 aa15.02□□□□□ -0.01
C9orf3-201ENST00000277198 CTIFO43310 598 aaKnown RBP15.02□□□□□ -0.01
C9orf3-201ENST00000277198 YEATS4O95619 227 aa15.02□□□□□ -0.01
C9orf3-201ENST00000277198 PCCAP05165 728 aaPredicted RBP15.02□□□□□ -0.01
C9orf3-201ENST00000277198 CSF1RP07333 972 aa15.02□□□□□ -0.01
C9orf3-201ENST00000277198 CCT2P78371 535 aaKnown RBP15.02□□□□□ -0.01
C9orf3-201ENST00000277198 SYCP1Q15431 976 aa15.02□□□□□ -0.01
C9orf3-201ENST00000277198 CCDC93Q567U6 631 aa15.02□□□□□ -0.01
C9orf3-201ENST00000277198 BRAPQ7Z569 592 aa15.02□□□□□ -0.01
C9orf3-201ENST00000277198 KCNG4Q8TDN1 519 aa15.02□□□□□ -0.01
C9orf3-201ENST00000277198 CCDC94Q9BW85 323 aaPredicted RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms