RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 CNTNAP5Q8WYK1 1306 aa13.14□□□□□ -0.31
LRTM1-201ENST00000273286 CNTNAP4Q9C0A0 1308 aa13.14□□□□□ -0.31
LRTM1-201ENST00000273286 ATP10DQ9P241 1426 aa13.14□□□□□ -0.31
LRTM1-201ENST00000273286 ATP9BO43861 1147 aa13.13□□□□□ -0.31
LRTM1-201ENST00000273286 CTBSQ01459 385 aa13.13□□□□□ -0.31
LRTM1-201ENST00000273286 MORC1Q86VD1 984 aa13.13□□□□□ -0.31
LRTM1-201ENST00000273286 AMIGO3Q86WK7 504 aa13.13□□□□□ -0.31
LRTM1-201ENST00000273286 TPCN2Q8NHX9 752 aa13.13□□□□□ -0.31
LRTM1-201ENST00000273286 KNSTRNQ9Y448 316 aa13.13□□□□□ -0.31
LRTM1-201ENST00000273286 ADCY9O60503 1353 aa13.13□□□□□ -0.31
LRTM1-201ENST00000273286 PHF20L1A8MW92 1017 aa13.13□□□□□ -0.31
LRTM1-201ENST00000273286 C2CD2LO14523 706 aa13.13□□□□□ -0.31
LRTM1-201ENST00000273286 ATXN7O15265 892 aaPredicted RBP13.13□□□□□ -0.31
LRTM1-201ENST00000273286 CABP4P57796 275 aa13.13□□□□□ -0.31
LRTM1-201ENST00000273286 TGFB2P61812 414 aa13.13□□□□□ -0.31
LRTM1-201ENST00000273286 ZNF530Q6P9A1 599 aaPredicted RBP13.13□□□□□ -0.31
LRTM1-201ENST00000273286 KIAA1024Q9UPX6 916 aa13.13□□□□□ -0.31
LRTM1-201ENST00000273286 DNMT3AQ9Y6K1 912 aaPredicted RBP13.13□□□□□ -0.31
LRTM1-201ENST00000273286 SHISA8B8ZZ34 492 aa13.12□□□□□ -0.31
LRTM1-201ENST00000273286 RPS6KA4O75676 772 aa13.12□□□□□ -0.31
LRTM1-201ENST00000273286 MMP10P09238 476 aa13.12□□□□□ -0.31
LRTM1-201ENST00000273286 MTHFSP49914 203 aa13.12□□□□□ -0.31
LRTM1-201ENST00000273286 GOLGA6L1Q8N7Z2 621 aa13.12□□□□□ -0.31
LRTM1-201ENST00000273286 DCDC2BA2VCK2 349 aa13.11□□□□□ -0.31
LRTM1-201ENST00000273286 RFC4P35249 363 aa13.11□□□□□ -0.31
LRTM1-201ENST00000273286 ATP1A2P50993 1020 aa13.11□□□□□ -0.31
LRTM1-201ENST00000273286 EPHA4P54764 986 aa13.11□□□□□ -0.31
LRTM1-201ENST00000273286 C1orf229Q6ZS94 237 aaPredicted RBP13.11□□□□□ -0.31
LRTM1-201ENST00000273286 SLC9A9Q8IVB4 645 aa13.11□□□□□ -0.31
LRTM1-201ENST00000273286 TNS4Q8IZW8 715 aa13.11□□□□□ -0.31
LRTM1-201ENST00000273286 BEND7Q8N7W2 519 aaPredicted RBP13.11□□□□□ -0.31
LRTM1-201ENST00000273286 GALNT6Q8NCL4 622 aa13.11□□□□□ -0.31
LRTM1-201ENST00000273286 ZDHHC1Q8WTX9 485 aa13.11□□□□□ -0.31
LRTM1-201ENST00000273286 COL5A3P25940 1745 aaPredicted RBP13.11□□□□□ -0.31
LRTM1-201ENST00000273286 KDM6AO15550 1401 aaPredicted RBP13.11□□□□□ -0.31
LRTM1-201ENST00000273286 KIF13BQ9NQT8 1826 aa13.1□□□□□ -0.31
LRTM1-201ENST00000273286 CICQ96RK0 1608 aaPredicted RBP13.1□□□□□ -0.31
LRTM1-201ENST00000273286 TXLNAP40222 546 aa13.1□□□□□ -0.31
LRTM1-201ENST00000273286 CLDN10P78369 228 aa13.1□□□□□ -0.31
LRTM1-201ENST00000273286 FOXK2Q01167 660 aa13.1□□□□□ -0.31
LRTM1-201ENST00000273286 BICDL1Q6ZP65 573 aa13.1□□□□□ -0.31
LRTM1-201ENST00000273286 ZIC5Q96T25 663 aa13.1□□□□□ -0.31
LRTM1-201ENST00000273286 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
LRTM1-201ENST00000273286 GJA3Q9Y6H8 435 aa13.1□□□□□ -0.31
LRTM1-201ENST00000273286 TBCELQ5QJ74 424 aa13.09□□□□□ -0.31
LRTM1-201ENST00000273286 CCDC102BQ68D86 513 aa13.09□□□□□ -0.31
LRTM1-201ENST00000273286 CCER1Q8TC90 406 aaPredicted RBP13.09□□□□□ -0.31
LRTM1-201ENST00000273286 GLMNQ92990 594 aa13.09□□□□□ -0.31
LRTM1-201ENST00000273286 KHNYNO15037 678 aaKnown RBP13.08□□□□□ -0.32
LRTM1-201ENST00000273286 ZBTB7BO15156 539 aaPredicted RBP13.08□□□□□ -0.32
LRTM1-201ENST00000273286 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
LRTM1-201ENST00000273286 C10orf71Q711Q0 1435 aa13.08□□□□□ -0.32
LRTM1-201ENST00000273286 SMIM5Q71RC9 77 aa13.08□□□□□ -0.32
LRTM1-201ENST00000273286 EDARADDQ8WWZ3 215 aa13.08□□□□□ -0.32
LRTM1-201ENST00000273286 GGA1Q9UJY5 639 aa13.08□□□□□ -0.32
LRTM1-201ENST00000273286 PXDNLA1KZ92 1463 aa13.08□□□□□ -0.32
LRTM1-201ENST00000273286 MAPTP10636 758 aaKnown RBP13.07□□□□□ -0.32
LRTM1-201ENST00000273286 GYS1P13807 737 aa13.07□□□□□ -0.32
LRTM1-201ENST00000273286 TEAD4Q15561 434 aa13.07□□□□□ -0.32
LRTM1-201ENST00000273286 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
LRTM1-201ENST00000273286 SLCO4C1Q6ZQN7 724 aa13.07□□□□□ -0.32
LRTM1-201ENST00000273286 OGFOD1Q8N543 542 aa13.07□□□□□ -0.32
LRTM1-201ENST00000273286 MKRN1Q9UHC7 482 aaKnown RBP13.07□□□□□ -0.32
LRTM1-201ENST00000273286 ZNF232Q9UNY5 417 aa13.07□□□□□ -0.32
LRTM1-201ENST00000273286 PTCD1O75127 700 aaKnown RBP13.06□□□□□ -0.32
LRTM1-201ENST00000273286 CD33P20138 364 aa13.06□□□□□ -0.32
LRTM1-201ENST00000273286 IL13P35225 146 aa13.06□□□□□ -0.32
LRTM1-201ENST00000273286 TNP2Q05952 138 aa13.06□□□□□ -0.32
LRTM1-201ENST00000273286 C4AP0C0L4 1744 aa13.06□□□□□ -0.32
LRTM1-201ENST00000273286 NOS2P35228 1153 aa13.05□□□□□ -0.32
LRTM1-201ENST00000273286 CRKLP46109 303 aaKnown RBP13.05□□□□□ -0.32
LRTM1-201ENST00000273286 GPAT2Q6NUI2 795 aa13.05□□□□□ -0.32
LRTM1-201ENST00000273286 AEBP1Q8IUX7 1158 aa13.05□□□□□ -0.32
LRTM1-201ENST00000273286 SCN11AQ9UI33 1791 aa13.05□□□□□ -0.32
LRTM1-201ENST00000273286 FAM157BP0CG42 384 aa13.05□□□□□ -0.32
LRTM1-201ENST00000273286 ARAFP10398 606 aa13.05□□□□□ -0.32
LRTM1-201ENST00000273286 SNRPNP63162 240 aaKnown RBP13.05□□□□□ -0.32
LRTM1-201ENST00000273286 ZNF594Q96JF6 807 aaPredicted RBP13.05□□□□□ -0.32
LRTM1-201ENST00000273286 RRAGCQ9HB90 399 aa13.05□□□□□ -0.32
LRTM1-201ENST00000273286 HCN2Q9UL51 889 aa13.05□□□□□ -0.32
LRTM1-201ENST00000273286 BCS1LQ9Y276 419 aa13.05□□□□□ -0.32
LRTM1-201ENST00000273286 USP42Q9H9J4 1324 aaKnown RBP13.04□□□□□ -0.32
LRTM1-201ENST00000273286 MYH14Q7Z406 1995 aaKnown RBP13.04□□□□□ -0.32
LRTM1-201ENST00000273286 HSPA6P17066 643 aa13.04□□□□□ -0.32
LRTM1-201ENST00000273286 LARGE2Q8N3Y3 721 aa13.04□□□□□ -0.32
LRTM1-201ENST00000273286 SLC52A2Q9HAB3 445 aa13.04□□□□□ -0.32
LRTM1-201ENST00000273286 KIAA1551Q9HCM1 1747 aa13.03□□□□□ -0.32
LRTM1-201ENST00000273286 CEP350Q5VT06 3117 aa13.03□□□□□ -0.32
LRTM1-201ENST00000273286 A0A0G2JLW4 131 aa13.03□□□□□ -0.32
LRTM1-201ENST00000273286 PALM3A6NDB9 673 aaPredicted RBP13.03□□□□□ -0.32
LRTM1-201ENST00000273286 AMPD1P23109 780 aa13.03□□□□□ -0.32
LRTM1-201ENST00000273286 SH3PXD2AQ5TCZ1 1133 aa13.03□□□□□ -0.32
LRTM1-201ENST00000273286 ZNF526Q8TF50 670 aaPredicted RBP13.03□□□□□ -0.32
LRTM1-201ENST00000273286 TSPAN10Q9H1Z9 355 aaPredicted RBP13.03□□□□□ -0.32
LRTM1-201ENST00000273286 PIM2Q9P1W9 311 aa13.03□□□□□ -0.32
LRTM1-201ENST00000273286 WWC3Q9ULE0 1092 aa13.03□□□□□ -0.32
LRTM1-201ENST00000273286 MRC1P22897 1456 aa13.02□□□□□ -0.32
LRTM1-201ENST00000273286 SERTM1A2A2V5 107 aa13.02□□□□□ -0.33
LRTM1-201ENST00000273286 NEURL1BA8MQ27 555 aa13.02□□□□□ -0.33
LRTM1-201ENST00000273286 SAMD5Q5TGI4 173 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms