RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 TACC3Q9Y6A5 838 aa11.84□□□□□ -0.51
OTOF-201ENST00000272371 TNRQ92752 1358 aa11.84□□□□□ -0.51
OTOF-201ENST00000272371 PPARDQ03181 441 aa11.84□□□□□ -0.51
OTOF-201ENST00000272371 MCM10Q7L590 875 aa11.84□□□□□ -0.51
OTOF-201ENST00000272371 USP37Q86T82 979 aa11.84□□□□□ -0.51
OTOF-201ENST00000272371 CRACR2BQ8N4Y2 399 aaPredicted RBP11.84□□□□□ -0.51
OTOF-201ENST00000272371 STAG1Q8WVM7 1258 aa11.84□□□□□ -0.51
OTOF-201ENST00000272371 MCM7P33993 719 aa11.84□□□□□ -0.51
OTOF-201ENST00000272371 ZGPATQ8N5A5 531 aaKnown RBP11.84□□□□□ -0.51
OTOF-201ENST00000272371 CCT6AP40227 531 aaKnown RBP11.84□□□□□ -0.51
OTOF-201ENST00000272371 SF3A3Q12874 501 aaKnown RBP eCLIP11.84□□□□□ -0.51
OTOF-201ENST00000272371 PAK2Q13177 524 aa11.84□□□□□ -0.51
OTOF-201ENST00000272371 RASEFQ8IZ41 740 aa11.84□□□□□ -0.51
OTOF-201ENST00000272371 TMOD3Q9NYL9 352 aa11.84□□□□□ -0.51
OTOF-201ENST00000272371 GOLGA8KD6RF30 607 aa11.83□□□□□ -0.51
OTOF-201ENST00000272371 RPSAP08865 295 aaKnown RBP11.83□□□□□ -0.51
OTOF-201ENST00000272371 ZNF445P59923 1031 aa11.83□□□□□ -0.51
OTOF-201ENST00000272371 PHLDB3Q6NSJ2 640 aa11.83□□□□□ -0.51
OTOF-201ENST00000272371 RPGRQ92834 1020 aaKnown RBP11.83□□□□□ -0.51
OTOF-201ENST00000272371 TBC1D31Q96DN5 1066 aa11.83□□□□□ -0.51
OTOF-201ENST00000272371 ZNF408Q9H9D4 720 aa11.83□□□□□ -0.51
OTOF-201ENST00000272371 PPFIA2O75334 1257 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 SLC5A1P13866 664 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 MTMR3Q13615 1198 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 IGSF22Q8N9C0 903 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 SMARCC2Q8TAQ2 1214 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 MRFAP1L1Q96HT8 127 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 LRRC2Q9BYS8 371 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 ZBTB43O43298 467 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 BRD3Q15059 726 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 LRRC23Q53EV4 343 aaPredicted RBP11.83□□□□□ -0.52
OTOF-201ENST00000272371 RASIP1Q5U651 963 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 MGEA5O60502 916 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 TAF7Q15545 349 aaPredicted RBP11.83□□□□□ -0.52
OTOF-201ENST00000272371 FAN1Q9Y2M0 1017 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 HHATQ5VTY9 493 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 VAT1LQ9HCJ6 419 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 VCX3AQ9NNX9 186 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 LARSQ9P2J5 1176 aaKnown RBP11.83□□□□□ -0.52
OTOF-201ENST00000272371 RBM8AQ9Y5S9 174 aaKnown RBP11.83□□□□□ -0.52
OTOF-201ENST00000272371 NPHP3Q7Z494 1330 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 INF2Q27J81 1249 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 ERMNQ8TAM6 284 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 FBXO41Q8TF61 875 aa11.83□□□□□ -0.52
OTOF-201ENST00000272371 WDR78Q5VTH9 848 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 INTS4Q96HW7 963 aaKnown RBP11.82□□□□□ -0.52
OTOF-201ENST00000272371 EFCC1Q9HA90 598 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 CTNND2Q9UQB3 1225 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 ZBTB12Q9Y330 459 aaPredicted RBP11.82□□□□□ -0.52
OTOF-201ENST00000272371 RRP15Q9Y3B9 282 aaKnown RBP11.82□□□□□ -0.52
OTOF-201ENST00000272371 ITSN2Q9NZM3 1697 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 CAPS2Q9BXY5 557 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 SNX16P57768 344 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 RNASE9P60153 205 aaKnown RBP11.82□□□□□ -0.52
OTOF-201ENST00000272371 MRRFQ96E11 262 aaKnown RBP11.82□□□□□ -0.52
OTOF-201ENST00000272371 ACSBG1Q96GR2 724 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 WTAPQ15007 396 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 CSRNP2Q9H175 543 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 Q9H521 79 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 XAB2Q9HCS7 855 aaKnown RBP11.82□□□□□ -0.52
OTOF-201ENST00000272371 ELP1O95163 1332 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 SND1Q7KZF4 910 aaKnown RBP eCLIP11.82□□□□□ -0.52
OTOF-201ENST00000272371 WDR7Q9Y4E6 1490 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 ZNF354CQ86Y25 554 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 CCT6BQ92526 530 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 SAMM50Q9Y512 469 aa11.82□□□□□ -0.52
OTOF-201ENST00000272371 I3L4J1 428 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 CRCPO75575 148 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 PPP2R5AQ15172 486 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 RTN1Q16799 776 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 MPRIPQ6WCQ1 1025 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 CCDC65Q8IXS2 484 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 EFCAB13Q8IY85 973 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 CXorf38Q8TB03 319 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 BCAP29Q9UHQ4 241 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 TRPC5Q9UL62 973 aaPredicted RBP11.81□□□□□ -0.52
OTOF-201ENST00000272371 SECISBP2LQ93073 1101 aaKnown RBP11.81□□□□□ -0.52
OTOF-201ENST00000272371 CBX8Q9HC52 389 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 CCDC61Q9Y6R9 512 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 AK2P54819 239 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 DDB1Q16531 1140 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 GEN1Q17RS7 908 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 MAK16Q9BXY0 300 aaKnown RBP11.81□□□□□ -0.52
OTOF-201ENST00000272371 ADAMTS12P58397 1594 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 TSPY2A6NKD2 308 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 IFIT5Q13325 482 aaKnown RBP11.81□□□□□ -0.52
OTOF-201ENST00000272371 DENND2CQ68D51 928 aa11.81□□□□□ -0.52
OTOF-201ENST00000272371 RNF40O75150 1001 aa11.8□□□□□ -0.52
OTOF-201ENST00000272371 MAP3K21Q5TCX8 1036 aa11.8□□□□□ -0.52
OTOF-201ENST00000272371 TRMT1LQ7Z2T5 733 aaKnown RBP11.8□□□□□ -0.52
OTOF-201ENST00000272371 HVCN1Q96D96 273 aa11.8□□□□□ -0.52
OTOF-201ENST00000272371 PPP1R9AQ9ULJ8 1098 aa11.8□□□□□ -0.52
OTOF-201ENST00000272371 ZNF500O60304 480 aaPredicted RBP11.8□□□□□ -0.52
OTOF-201ENST00000272371 CLTAP09496 248 aa11.8□□□□□ -0.52
OTOF-201ENST00000272371 SESN3P58005 492 aa11.8□□□□□ -0.52
OTOF-201ENST00000272371 EAPPQ56P03 285 aaPredicted RBP11.8□□□□□ -0.52
OTOF-201ENST00000272371 MGARPQ8TDB4 240 aa11.8□□□□□ -0.52
OTOF-201ENST00000272371 TSC1Q92574 1164 aa11.8□□□□□ -0.52
OTOF-201ENST00000272371 TCEANC2Q96MN5 208 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms