RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 MYO9BQ13459 2157 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 POLR3DP05423 398 aaPredicted RBP9.35□□□□□ -0.91
COL6A5-201ENST00000265379 FAM160A1Q05DH4 1040 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 IL17REQ8NFR9 667 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 CRACR2AQ9BSW2 395 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 IFI16Q16666 785 aaKnown RBP9.35□□□□□ -0.91
COL6A5-201ENST00000265379 UBE2Q2Q8WVN8 375 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 ORC3Q9UBD5 711 aaPredicted RBP9.35□□□□□ -0.91
COL6A5-201ENST00000265379 GIGYF2Q6Y7W6 1299 aaKnown RBP9.35□□□□□ -0.91
COL6A5-201ENST00000265379 CLEC17AQ6ZS10 378 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 LAD1O00515 517 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 YEATS4O95619 227 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 LIG1P18858 919 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 PRPHP41219 470 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 CCDC102AQ96A19 550 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 TRIML1Q8N9V2 468 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 CNBD1Q8NA66 436 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 FAM184BQ9ULE4 1060 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 USP16Q9Y5T5 823 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 GCOM1H8Y6P7 765 aaPredicted RBP9.35□□□□□ -0.91
COL6A5-201ENST00000265379 MYZAPP0CAP1 466 aa9.35□□□□□ -0.91
COL6A5-201ENST00000265379 NMIQ13287 307 aaPredicted RBP9.35□□□□□ -0.91
COL6A5-201ENST00000265379 ZNF512BQ96KM6 892 aaPredicted RBP9.35□□□□□ -0.91
COL6A5-201ENST00000265379 C6orf50Q9HD87 102 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 ALDH1B1P30837 517 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 ZNF76P36508 570 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 PLCD1P51178 756 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 TRIM75PA6NK02 468 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 CEBPZQ03701 1054 aaKnown RBP9.34□□□□□ -0.91
COL6A5-201ENST00000265379 ZNF496Q96IT1 587 aaPredicted RBP9.34□□□□□ -0.91
COL6A5-201ENST00000265379 SPINK5Q9NQ38 1064 aaPredicted RBP9.34□□□□□ -0.91
COL6A5-201ENST00000265379 SPATA31A6Q5VVP1 1343 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 MED23Q9ULK4 1368 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 MAGEB6P1A0A0J9YX57 407 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 PPP4R3AQ6IN85 833 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 KIF18AQ8NI77 898 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 NIP7Q9Y221 180 aaKnown RBP eCLIP9.34□□□□□ -0.91
COL6A5-201ENST00000265379 SLC26A4O43511 780 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 DDAH1O94760 285 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 CTSWP56202 376 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 CCDC6Q16204 474 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 HOOK3Q86VS8 718 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 SLC17A8Q8NDX2 589 aa9.34□□□□□ -0.91
COL6A5-201ENST00000265379 PARP4Q9UKK3 1724 aaKnown RBP9.34□□□□□ -0.92
COL6A5-201ENST00000265379 UBAP1LF5GYI3 381 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 EIF5P55010 431 aaKnown RBP9.33□□□□□ -0.92
COL6A5-201ENST00000265379 TRAPPC3LQ5T215 181 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 SLC9C2Q5TAH2 1124 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 CRACR2BQ8N4Y2 399 aaPredicted RBP9.33□□□□□ -0.92
COL6A5-201ENST00000265379 WDR70Q9NW82 654 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 ORAI2Q96SN7 254 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 IMPACTQ9P2X3 320 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 A0A1W2PQ27 194 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 A0A1W2PQ64 194 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 A0A1W2PQD8 194 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 CUEDC2Q9H467 287 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 BTG4Q9NY30 223 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 DKC1O60832 514 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL6A5-201ENST00000265379 MICALCLQ6ZW33 695 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 CCDC8Q9H0W5 538 aaPredicted RBP9.33□□□□□ -0.92
COL6A5-201ENST00000265379 ABCF2Q9UG63 623 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 CHD2O14647 1828 aaKnown RBP9.33□□□□□ -0.92
COL6A5-201ENST00000265379 CTR9Q6PD62 1173 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 RABGAP1Q9Y3P9 1069 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 SMARCA5O60264 1052 aaPredicted RBP9.33□□□□□ -0.92
COL6A5-201ENST00000265379 ARHGAP29Q52LW3 1261 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 TMCO3Q6UWJ1 677 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 CNPY4Q8N129 248 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 TNNI2P48788 182 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 TSGA10IPQ3SY00 556 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 IFIT1BQ5T764 474 aaKnown RBP9.33□□□□□ -0.92
COL6A5-201ENST00000265379 TMEM87AQ8NBN3 555 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 LEMD3Q9Y2U8 911 aa9.33□□□□□ -0.92
COL6A5-201ENST00000265379 LDHBP07195 334 aaKnown RBP9.32□□□□□ -0.92
COL6A5-201ENST00000265379 APBB1IPQ7Z5R6 666 aaPredicted RBP9.32□□□□□ -0.92
COL6A5-201ENST00000265379 NUP133Q8WUM0 1156 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 PRC1O43663 620 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 GTF3C6Q969F1 213 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 NAA15Q9BXJ9 866 aaKnown RBP9.32□□□□□ -0.92
COL6A5-201ENST00000265379 MST1RQ04912 1400 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 SPA17Q15506 151 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 MYH6P13533 1939 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 SSBP05455 408 aaKnown RBP eCLIP9.32□□□□□ -0.92
COL6A5-201ENST00000265379 FILIP1Q7Z7B0 1213 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 UTYO14607 1347 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 SMC6Q96SB8 1091 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 PLVAPQ9BX97 442 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 TAOK3Q9H2K8 898 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 SPTLC2O15270 562 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 CUTAO60888 179 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 IQUBQ8NA54 791 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 ALS2CR12Q96Q35 445 aa9.32□□□□□ -0.92
COL6A5-201ENST00000265379 NUCKS1Q9H1E3 243 aaKnown RBP9.32□□□□□ -0.92
COL6A5-201ENST00000265379 A0A1B0GUL7 405 aa9.31□□□□□ -0.92
COL6A5-201ENST00000265379 BICDL1Q6ZP65 573 aa9.31□□□□□ -0.92
COL6A5-201ENST00000265379 FCHSD1Q86WN1 690 aa9.31□□□□□ -0.92
COL6A5-201ENST00000265379 CNNM3Q8NE01 707 aa9.31□□□□□ -0.92
COL6A5-201ENST00000265379 TRPC5Q9UL62 973 aaPredicted RBP9.31□□□□□ -0.92
COL6A5-201ENST00000265379 KLF18A0A0U1RQI7 1052 aa9.31□□□□□ -0.92
COL6A5-201ENST00000265379 USO1O60763 962 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms