RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 PITPNM2Q9BZ72 1349 aa17.24■□□□□ 0.35
SSBP1-201ENST00000265304 ZNF532Q9HCE3 1301 aa17.24■□□□□ 0.35
SSBP1-201ENST00000265304 HIP1O00291 1037 aa17.24■□□□□ 0.35
SSBP1-201ENST00000265304 CYP7A1P22680 504 aa17.24■□□□□ 0.35
SSBP1-201ENST00000265304 YY1P25490 414 aa17.24■□□□□ 0.35
SSBP1-201ENST00000265304 KIF4BQ2VIQ3 1234 aa17.24■□□□□ 0.35
SSBP1-201ENST00000265304 SPDYE2Q495Y8 402 aa17.24■□□□□ 0.35
SSBP1-201ENST00000265304 PCDHAC2Q9Y5I4 1007 aa17.24■□□□□ 0.35
SSBP1-201ENST00000265304 TRIM6-TRIM34B2RNG4 842 aa17.23■□□□□ 0.35
SSBP1-201ENST00000265304 NBPF9Q3BBW0 867 aa17.23■□□□□ 0.35
SSBP1-201ENST00000265304 TBC1D10BQ4KMP7 808 aaPredicted RBP17.23■□□□□ 0.35
SSBP1-201ENST00000265304 OSBP2Q969R2 916 aa17.23■□□□□ 0.35
SSBP1-201ENST00000265304 FSD1Q9BTV5 496 aa17.23■□□□□ 0.35
SSBP1-201ENST00000265304 IDI2Q9BXS1 227 aa17.23■□□□□ 0.35
SSBP1-201ENST00000265304 HELLSQ9NRZ9 838 aa17.23■□□□□ 0.35
SSBP1-201ENST00000265304 KIF3CO14782 793 aa17.22■□□□□ 0.35
SSBP1-201ENST00000265304 BAG3O95817 575 aa17.22■□□□□ 0.35
SSBP1-201ENST00000265304 CHGBP05060 677 aa17.22■□□□□ 0.35
SSBP1-201ENST00000265304 PLCG2P16885 1265 aa17.22■□□□□ 0.35
SSBP1-201ENST00000265304 CDC42EP5Q6NZY7 148 aa17.22■□□□□ 0.35
SSBP1-201ENST00000265304 ZNF784Q8NCA9 323 aaPredicted RBP17.22■□□□□ 0.35
SSBP1-201ENST00000265304 CHMLP26374 656 aa17.21■□□□□ 0.35
SSBP1-201ENST00000265304 BTDP43251 543 aa17.21■□□□□ 0.35
SSBP1-201ENST00000265304 RILPL2Q969X0 211 aa17.21■□□□□ 0.35
SSBP1-201ENST00000265304 PUS7LQ9H0K6 701 aaKnown RBP17.21■□□□□ 0.35
SSBP1-201ENST00000265304 GPBP1L1Q9HC44 474 aaPredicted RBP17.21■□□□□ 0.35
SSBP1-201ENST00000265304 ZNF70Q9UC06 446 aaPredicted RBP17.21■□□□□ 0.35
SSBP1-201ENST00000265304 MKRN1Q9UHC7 482 aaKnown RBP17.21■□□□□ 0.35
SSBP1-201ENST00000265304 MYH1P12882 1939 aa17.21■□□□□ 0.35
SSBP1-201ENST00000265304 COL2A1P02458 1487 aaPredicted RBP17.2■□□□□ 0.34
SSBP1-201ENST00000265304 RPAP1Q9BWH6 1393 aaPredicted RBP17.2■□□□□ 0.34
SSBP1-201ENST00000265304 WDHD1O75717 1129 aaPredicted RBP17.2■□□□□ 0.34
SSBP1-201ENST00000265304 SLFNL1Q499Z3 407 aa17.2■□□□□ 0.34
SSBP1-201ENST00000265304 FAM83AQ86UY5 434 aa17.2■□□□□ 0.34
SSBP1-201ENST00000265304 LDHDQ86WU2 507 aa17.2■□□□□ 0.34
SSBP1-201ENST00000265304 STRBPQ96SI9 672 aaKnown RBP17.2■□□□□ 0.34
SSBP1-201ENST00000265304 MYO1BO43795 1136 aa17.19■□□□□ 0.34
SSBP1-201ENST00000265304 TDRD3Q9H7E2 651 aaKnown RBP17.19■□□□□ 0.34
SSBP1-201ENST00000265304 DDX60LQ5H9U9 1706 aaKnown RBP17.18■□□□□ 0.34
SSBP1-201ENST00000265304 BAZ2AQ9UIF9 1905 aaKnown RBP17.18■□□□□ 0.34
SSBP1-201ENST00000265304 MAGEB6P1A0A0J9YX57 407 aa17.18■□□□□ 0.34
SSBP1-201ENST00000265304 ENTPD3O75355 529 aa17.18■□□□□ 0.34
SSBP1-201ENST00000265304 RBM5P52756 815 aaKnown RBP eCLIP17.18■□□□□ 0.34
SSBP1-201ENST00000265304 NMIQ13287 307 aaPredicted RBP17.18■□□□□ 0.34
SSBP1-201ENST00000265304 MCMDC2Q4G0Z9 681 aa17.18■□□□□ 0.34
SSBP1-201ENST00000265304 RBM26Q5T8P6 1007 aaKnown RBP17.18■□□□□ 0.34
SSBP1-201ENST00000265304 GIMAP6Q6P9H5 292 aa17.18■□□□□ 0.34
SSBP1-201ENST00000265304 FAM227BQ96M60 508 aa17.18■□□□□ 0.34
SSBP1-201ENST00000265304 USP40Q9NVE5 1235 aa17.18■□□□□ 0.34
SSBP1-201ENST00000265304 AATFQ9NY61 560 aaKnown RBP eCLIP17.18■□□□□ 0.34
SSBP1-201ENST00000265304 ASTN2O75129 1339 aaPredicted RBP17.18■□□□□ 0.34
SSBP1-201ENST00000265304 RAD50Q92878 1312 aa17.18■□□□□ 0.34
SSBP1-201ENST00000265304 CNTNAP1P78357 1384 aa17.17■□□□□ 0.34
SSBP1-201ENST00000265304 A0A0D9SFI3 127 aa17.17■□□□□ 0.34
SSBP1-201ENST00000265304 DYNLL1P63167 89 aaKnown RBP17.17■□□□□ 0.34
SSBP1-201ENST00000265304 APOBEC3FQ8IUX4 373 aaKnown RBP17.17■□□□□ 0.34
SSBP1-201ENST00000265304 SH3RF3Q8TEJ3 882 aaPredicted RBP17.17■□□□□ 0.34
SSBP1-201ENST00000265304 NOL10Q9BSC4 688 aaKnown RBP17.17■□□□□ 0.34
SSBP1-201ENST00000265304 FAM198AQ9UFP1 575 aa17.17■□□□□ 0.34
SSBP1-201ENST00000265304 PPP2R3BQ9Y5P8 575 aa17.17■□□□□ 0.34
SSBP1-201ENST00000265304 ATRNL1Q5VV63 1379 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 TRPM7Q96QT4 1865 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 M0R2C6 588 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 FOXP2O15409 715 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 GPAA1O43292 621 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 POTEIP0CG38 1075 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 POTEJP0CG39 1038 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 GNAT2P19087 354 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 ANGEL2Q5VTE6 544 aaKnown RBP17.16■□□□□ 0.34
SSBP1-201ENST00000265304 LCORLQ8N3X6 602 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 MIGA1Q8NAN2 632 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 FAM151AQ8WW52 585 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 SEC62Q99442 399 aaKnown RBP17.16■□□□□ 0.34
SSBP1-201ENST00000265304 DIAPH3Q9NSV4 1193 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 ATP8A2Q9NTI2 1148 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 TAOK2Q9UL54 1235 aa17.16■□□□□ 0.34
SSBP1-201ENST00000265304 SGSM2O43147 1006 aa17.15■□□□□ 0.34
SSBP1-201ENST00000265304 CDC45O75419 566 aa17.15■□□□□ 0.34
SSBP1-201ENST00000265304 MBD4O95243 580 aa17.15■□□□□ 0.34
SSBP1-201ENST00000265304 ITGBL1O95965 494 aaPredicted RBP17.15■□□□□ 0.34
SSBP1-201ENST00000265304 MAP3K10Q02779 954 aa17.15■□□□□ 0.34
SSBP1-201ENST00000265304 NFIAQ12857 509 aa17.15■□□□□ 0.34
SSBP1-201ENST00000265304 TNFAIP1Q13829 316 aa17.15■□□□□ 0.34
SSBP1-201ENST00000265304 ALX1Q15699 326 aa17.15■□□□□ 0.34
SSBP1-201ENST00000265304 RBM46Q8TBY0 533 aaKnown RBP17.15■□□□□ 0.34
SSBP1-201ENST00000265304 ZNF526Q8TF50 670 aaPredicted RBP17.15■□□□□ 0.34
SSBP1-201ENST00000265304 RUFY2Q8WXA3 655 aa17.15■□□□□ 0.34
SSBP1-201ENST00000265304 AIDAQ96BJ3 306 aa17.15■□□□□ 0.34
SSBP1-201ENST00000265304 TEPSINQ96N21 525 aa17.15■□□□□ 0.34
SSBP1-201ENST00000265304 CRNKL1Q9BZJ0 848 aaKnown RBP17.15■□□□□ 0.34
SSBP1-201ENST00000265304 ARMT1Q9H993 441 aa17.15■□□□□ 0.34
SSBP1-201ENST00000265304 GGA3Q9NZ52 723 aa17.15■□□□□ 0.34
SSBP1-201ENST00000265304 NAV1Q8NEY1 1877 aa17.14■□□□□ 0.33
SSBP1-201ENST00000265304 GSG1L2A8MUP6 293 aa17.14■□□□□ 0.33
SSBP1-201ENST00000265304 TOMM70O94826 608 aa17.14■□□□□ 0.33
SSBP1-201ENST00000265304 MFAP1P55081 439 aaKnown RBP17.14■□□□□ 0.33
SSBP1-201ENST00000265304 CHADLQ6NUI6 762 aa17.14■□□□□ 0.33
SSBP1-201ENST00000265304 CDC37L1Q7L3B6 337 aa17.14■□□□□ 0.33
SSBP1-201ENST00000265304 METTL16Q86W50 562 aaKnown RBP17.14■□□□□ 0.33
SSBP1-201ENST00000265304 TEX11Q8IYF3 940 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms