RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PNOCQ13519 176 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 HSP90B2PQ58FF3 399 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 TC2NQ8N9U0 490 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 PANX2Q96RD6 677 aa14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 MARF1Q9Y4F3 1742 aaKnown RBP14.19□□□□□ -0.14
CHMP2B-201ENST00000263780 PRAMEF22A3QJZ6 481 aa14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 CHGBP05060 677 aa14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 COPS6Q7L5N1 327 aa14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 NUTM2AQ8IVF1 878 aaPredicted RBP14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 MSANTD4Q8NCY6 345 aa14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 ENOX1Q8TC92 643 aaKnown RBP14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 NEUROD6Q96NK8 337 aa14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 CDC23Q9UJX2 597 aa14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 MROH7-TTC4A0A0A0MT08 1334 aa14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 MAST3O60307 1309 aa14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 MAP3K15Q6ZN16 1313 aa14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 ZFYP08048 801 aaPredicted RBP14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 BEND6Q5SZJ8 279 aaPredicted RBP14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 SHC4Q6S5L8 630 aa14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 TOGARAM2Q6ZUX3 1019 aa14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 RALYLQ86SE5 291 aaKnown RBP14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 NFATC2IPQ8NCF5 419 aa14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 NCOA7Q8NI08 942 aa14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.18□□□□□ -0.14
CHMP2B-201ENST00000263780 A0A1B0GUL7 405 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 KIF28PB7ZC32 967 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 CT47A1Q5JQC4 288 aaPredicted RBP14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 TRIML1Q8N9V2 468 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 VPS18Q9P253 973 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 KCNH3Q9ULD8 1083 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 LMTK3Q96Q04 1460 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 AKR1B15C9JRZ8 316 aaPredicted RBP14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 H3BQF6 201 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 IFIT1P09914 478 aaKnown RBP14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 GOLGA8FQ08AF8 430 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 GOLGA8DPQ0D2H9 430 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 PDE11AQ9HCR9 933 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 ATG3Q9NT62 314 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 INTS13Q9NVM9 706 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 RAI14Q9P0K7 980 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 HPS5Q9UPZ3 1129 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 PCDHA5Q9Y5H7 936 aa14.17□□□□□ -0.14
CHMP2B-201ENST00000263780 RGPD8O14715 1765 aaPredicted RBP14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 MYL6BP14649 208 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 IL15P40933 162 aaPredicted RBP14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 TRIM29Q14134 588 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 UBE3BQ7Z3V4 1068 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 ARHGEF25Q86VW2 580 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 FAM71BQ8TC56 605 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 ALG1Q9BT22 464 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 ZNF18P17022 549 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 MAGEA9P43362 315 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 PIP4K2BP78356 416 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 MCM6Q14566 821 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 PTPAQ15257 358 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 KANK3Q6NY19 840 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 METTL16Q86W50 562 aaKnown RBP14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 PPFIBP1Q86W92 1011 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 MB21D2Q8IYB1 491 aaPredicted RBP14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 L1RE1Q9UN81 338 aa14.16□□□□□ -0.14
CHMP2B-201ENST00000263780 NOP2P46087 812 aaKnown RBP14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 ADKP55263 362 aaKnown RBP14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 ZNF790Q6PG37 636 aa14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 VPS37DQ86XT2 251 aa14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 YY1AP1Q9H869 796 aa14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 MED4Q9NPJ6 270 aa14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 NFE2L3Q9Y4A8 694 aa14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 PLEKHG2Q9H7P9 1386 aa14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 A0A087WZG4 1122 aa14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 CTAGE9A4FU28 777 aa14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 TRIM66O15016 1216 aa14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 IRX3P78415 501 aaPredicted RBP14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 KARSQ15046 597 aaKnown RBP14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 LONRF3Q496Y0 759 aa14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 LRRC59Q96AG4 307 aaKnown RBP14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 PHF8Q9UPP1 1060 aa14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 ZMYM6O95789 1325 aa14.15□□□□□ -0.14
CHMP2B-201ENST00000263780 LTN1O94822 1766 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 NFAT5O94916 1531 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 GYS2P54840 703 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 TRDNQ13061 729 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 WHAMMP3Q1A5X7 153 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 TTLL5Q6EMB2 1281 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 PLCD3Q8N3E9 789 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 KRI1Q8N9T8 703 aaKnown RBP14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 ANKZF1Q9H8Y5 726 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 LCMT1Q9UIC8 334 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 ERCC5P28715 1186 aaPredicted RBP14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 MAPK8IP2Q13387 824 aaPredicted RBP14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 NR1I3Q14994 352 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 KIF4BQ2VIQ3 1234 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 TTC39AQ5SRH9 613 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 NT5DC1Q5TFE4 455 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 KRT40Q6A162 431 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 LMBR1LQ6UX01 489 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 CCDC51Q96ER9 411 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 MAP3K14Q99558 947 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 BRMS1Q9HCU9 246 aa14.14□□□□□ -0.15
CHMP2B-201ENST00000263780 TTF2Q9UNY4 1162 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms