RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CNTROBQ8N137 903 aa22.23■■□□□ 1.15
SDF4-201ENST00000263741 MIGA1Q8NAN2 632 aa22.23■■□□□ 1.15
SDF4-201ENST00000263741 SMC1BQ8NDV3 1235 aa22.23■■□□□ 1.15
SDF4-201ENST00000263741 ZNF70Q9UC06 446 aaPredicted RBP22.23■■□□□ 1.15
SDF4-201ENST00000263741 SPDYE2Q495Y8 402 aa22.22■■□□□ 1.15
SDF4-201ENST00000263741 ZC3H15Q8WU90 426 aaKnown RBP22.22■■□□□ 1.15
SDF4-201ENST00000263741 DCPSQ96C86 337 aaKnown RBP22.22■■□□□ 1.15
SDF4-201ENST00000263741 PGAP2Q9UHJ9 254 aa22.22■■□□□ 1.15
SDF4-201ENST00000263741 MYO1BO43795 1136 aa22.22■■□□□ 1.15
SDF4-201ENST00000263741 GSTO1P78417 241 aa22.22■■□□□ 1.15
SDF4-201ENST00000263741 CDC42EP5Q6NZY7 148 aa22.22■■□□□ 1.15
SDF4-201ENST00000263741 KRT26Q7Z3Y9 468 aa22.22■■□□□ 1.15
SDF4-201ENST00000263741 USP48Q86UV5 1035 aa22.22■■□□□ 1.15
SDF4-201ENST00000263741 MRIQ9BWK5 157 aa22.22■■□□□ 1.15
SDF4-201ENST00000263741 AATFQ9NY61 560 aaKnown RBP eCLIP22.22■■□□□ 1.156e-8■■■■■ 44.5
SDF4-201ENST00000263741 ZNF532Q9HCE3 1301 aa22.21■■□□□ 1.15
SDF4-201ENST00000263741 KBTBD3Q8NAB2 608 aa22.21■■□□□ 1.15
SDF4-201ENST00000263741 OSBPL3Q9H4L5 887 aa22.21■■□□□ 1.15
SDF4-201ENST00000263741 TCP10L2B9ZVM9 353 aa22.21■■□□□ 1.15
SDF4-201ENST00000263741 PRAMEF18Q5VWM3 479 aa22.21■■□□□ 1.15
SDF4-201ENST00000263741 SLF2Q8IX21 1173 aa22.21■■□□□ 1.15
SDF4-201ENST00000263741 FSD1Q9BTV5 496 aa22.21■■□□□ 1.15
SDF4-201ENST00000263741 TRIM6-TRIM34B2RNG4 842 aa22.2■■□□□ 1.14
SDF4-201ENST00000263741 RGS3P49796 1198 aa22.2■■□□□ 1.14
SDF4-201ENST00000263741 DYNLL1P63167 89 aaKnown RBP22.2■■□□□ 1.14
SDF4-201ENST00000263741 USP40Q9NVE5 1235 aa22.2■■□□□ 1.14
SDF4-201ENST00000263741 GPR75-ASB3A0A0A6YYF3 556 aa22.19■■□□□ 1.14
SDF4-201ENST00000263741 TCRBV5S4A2TA0A5A2 114 aa22.19■■□□□ 1.14
SDF4-201ENST00000263741 GSPT1P15170 499 aaKnown RBP22.19■■□□□ 1.14
SDF4-201ENST00000263741 ADD2P35612 726 aa22.19■■□□□ 1.14
SDF4-201ENST00000263741 NFIAQ12857 509 aa22.19■■□□□ 1.14
SDF4-201ENST00000263741 SULF1Q8IWU6 871 aa22.19■■□□□ 1.14
SDF4-201ENST00000263741 FAM163AQ96GL9 167 aaPredicted RBP22.19■■□□□ 1.14
SDF4-201ENST00000263741 NAV1Q8NEY1 1877 aa22.19■■□□□ 1.14
SDF4-201ENST00000263741 PITPNM2Q9BZ72 1349 aa22.19■■□□□ 1.14
SDF4-201ENST00000263741 ITGBL1O95965 494 aaPredicted RBP22.19■■□□□ 1.14
SDF4-201ENST00000263741 LDHCP07864 332 aa22.19■■□□□ 1.14
SDF4-201ENST00000263741 RILPL2Q969X0 211 aa22.19■■□□□ 1.14
SDF4-201ENST00000263741 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.19■■□□□ 1.146e-7■□□□□ 8.8
SDF4-201ENST00000263741 BAZ2AQ9UIF9 1905 aaKnown RBP22.18■■□□□ 1.14
SDF4-201ENST00000263741 RHBDL3P58872 404 aa22.18■■□□□ 1.14
SDF4-201ENST00000263741 CDAN1Q8IWY9 1227 aa22.18■■□□□ 1.14
SDF4-201ENST00000263741 SH3RF3Q8TEJ3 882 aaPredicted RBP22.18■■□□□ 1.14
SDF4-201ENST00000263741 MYH1P12882 1939 aa22.18■■□□□ 1.14
SDF4-201ENST00000263741 TTC22Q5TAA0 569 aa22.18■■□□□ 1.14
SDF4-201ENST00000263741 CDC37L1Q7L3B6 337 aa22.18■■□□□ 1.14
SDF4-201ENST00000263741 APOBEC3FQ8IUX4 373 aaKnown RBP22.18■■□□□ 1.14
SDF4-201ENST00000263741 CNTNAP1P78357 1384 aa22.17■■□□□ 1.14
SDF4-201ENST00000263741 RFX7Q2KHR2 1363 aa22.17■■□□□ 1.14
SDF4-201ENST00000263741 TCP10Q12799 353 aa22.17■■□□□ 1.14
SDF4-201ENST00000263741 ZNF408Q9H9D4 720 aa22.17■■□□□ 1.14
SDF4-201ENST00000263741 PICALMQ13492 652 aa22.16■■□□□ 1.14
SDF4-201ENST00000263741 NOL10Q9BSC4 688 aaKnown RBP22.16■■□□□ 1.14
SDF4-201ENST00000263741 TMOD2Q9NZR1 351 aa22.16■■□□□ 1.14
SDF4-201ENST00000263741 FSTL1Q12841 308 aa22.16■■□□□ 1.14
SDF4-201ENST00000263741 EVI5LQ96CN4 794 aa22.16■■□□□ 1.14
SDF4-201ENST00000263741 DEFB129Q9H1M3 183 aa22.16■■□□□ 1.14
SDF4-201ENST00000263741 RASA3Q14644 834 aa22.15■■□□□ 1.14
SDF4-201ENST00000263741 TMEM39BQ9GZU3 492 aa22.15■■□□□ 1.14
SDF4-201ENST00000263741 DDX4Q9NQI0 724 aaKnown RBP22.15■■□□□ 1.14
SDF4-201ENST00000263741 PASKQ96RG2 1323 aa22.15■■□□□ 1.14
SDF4-201ENST00000263741 WDHD1O75717 1129 aaPredicted RBP22.15■■□□□ 1.14
SDF4-201ENST00000263741 DDX60LQ5H9U9 1706 aaKnown RBP22.15■■□□□ 1.14
SDF4-201ENST00000263741 TEX11Q8IYF3 940 aa22.15■■□□□ 1.14
SDF4-201ENST00000263741 CDCA5Q96FF9 252 aa22.15■■□□□ 1.14
SDF4-201ENST00000263741 FAM198AQ9UFP1 575 aa22.15■■□□□ 1.14
SDF4-201ENST00000263741 SSC5DA1L4H1 1573 aa22.14■■□□□ 1.13
SDF4-201ENST00000263741 RNF113AO15541 343 aaKnown RBP22.14■■□□□ 1.13
SDF4-201ENST00000263741 ZFPM1Q8IX07 1006 aa22.14■■□□□ 1.13
SDF4-201ENST00000263741 LCORLQ8N3X6 602 aa22.14■■□□□ 1.13
SDF4-201ENST00000263741 RIOK1Q9BRS2 568 aaKnown RBP22.14■■□□□ 1.13
SDF4-201ENST00000263741 PUS7LQ9H0K6 701 aaKnown RBP22.14■■□□□ 1.13
SDF4-201ENST00000263741 ARMT1Q9H993 441 aa22.14■■□□□ 1.13
SDF4-201ENST00000263741 SIPA1L1O43166 1804 aa22.13■■□□□ 1.13
SDF4-201ENST00000263741 MAGEB6P1A0A0J9YX57 407 aa22.13■■□□□ 1.13
SDF4-201ENST00000263741 MBD4O95243 580 aa22.13■■□□□ 1.13
SDF4-201ENST00000263741 BAG3O95817 575 aa22.13■■□□□ 1.13
SDF4-201ENST00000263741 UBE3CQ15386 1083 aa22.13■■□□□ 1.13
SDF4-201ENST00000263741 SEC62Q99442 399 aaKnown RBP22.13■■□□□ 1.13
SDF4-201ENST00000263741 C1QTNF8P60827 252 aa22.13■■□□□ 1.13
SDF4-201ENST00000263741 ZSCAN25Q6NSZ9 544 aa22.13■■□□□ 1.13
SDF4-201ENST00000263741 FZD1Q9UP38 647 aa22.13■■□□□ 1.13
SDF4-201ENST00000263741 OTOFQ9HC10 1997 aa22.13■■□□□ 1.13
SDF4-201ENST00000263741 SDSP20132 328 aa22.12■■□□□ 1.13
SDF4-201ENST00000263741 PPP4CP60510 307 aa22.12■■□□□ 1.13
SDF4-201ENST00000263741 OSBP2Q969R2 916 aa22.12■■□□□ 1.13
SDF4-201ENST00000263741 M0R2C6 588 aa22.11■■□□□ 1.13
SDF4-201ENST00000263741 TNFAIP1Q13829 316 aa22.11■■□□□ 1.13
SDF4-201ENST00000263741 IGSF3O75054 1194 aa22.11■■□□□ 1.13
SDF4-201ENST00000263741 SLC4A8Q2Y0W8 1093 aa22.11■■□□□ 1.13
SDF4-201ENST00000263741 NBPF12Q5TAG4 269 aaPredicted RBP22.11■■□□□ 1.13
SDF4-201ENST00000263741 MAPKAPK5Q8IW41 473 aa22.11■■□□□ 1.13
SDF4-201ENST00000263741 TGFBRAP1Q8WUH2 860 aa22.11■■□□□ 1.13
SDF4-201ENST00000263741 APPBP2Q92624 585 aa22.11■■□□□ 1.13
SDF4-201ENST00000263741 CELF2O95319 508 aaKnown RBP22.1■■□□□ 1.13
SDF4-201ENST00000263741 FAM227BQ96M60 508 aa22.1■■□□□ 1.13
SDF4-201ENST00000263741 TEPSINQ96N21 525 aa22.1■■□□□ 1.13
SDF4-201ENST00000263741 TNNI2P48788 182 aa22.1■■□□□ 1.13
SDF4-201ENST00000263741 SDR42E1Q8WUS8 393 aa22.1■■□□□ 1.13
SDF4-201ENST00000263741 IDI2Q9BXS1 227 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms