RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 DHX32Q7L7V1 743 aaKnown RBP27.17■■□□□ 1.94
SMARCB1-201ENST00000263121 ECE2O60344 883 aa27.16■■□□□ 1.94
SMARCB1-201ENST00000263121 PPP4CP60510 307 aa27.16■■□□□ 1.94
SMARCB1-201ENST00000263121 EXOSC10Q01780 885 aaKnown RBP27.16■■□□□ 1.94
SMARCB1-201ENST00000263121 ANKRD1Q15327 319 aa27.16■■□□□ 1.94
SMARCB1-201ENST00000263121 AOC3Q16853 763 aa27.16■■□□□ 1.94
SMARCB1-201ENST00000263121 SOGA3Q5TF21 947 aa27.16■■□□□ 1.94
SMARCB1-201ENST00000263121 GIMAP6Q6P9H5 292 aa27.16■■□□□ 1.94
SMARCB1-201ENST00000263121 TBC1D10CQ8IV04 446 aa27.16■■□□□ 1.94
SMARCB1-201ENST00000263121 CERS5Q8N5B7 392 aa27.16■■□□□ 1.94
SMARCB1-201ENST00000263121 TCEANC2Q96MN5 208 aa27.16■■□□□ 1.94
SMARCB1-201ENST00000263121 TOB2Q14106 344 aaPredicted RBP27.15■■□□□ 1.94
SMARCB1-201ENST00000263121 FAM163AQ96GL9 167 aaPredicted RBP27.15■■□□□ 1.94
SMARCB1-201ENST00000263121 CRNKL1Q9BZJ0 848 aaKnown RBP27.15■■□□□ 1.94
SMARCB1-201ENST00000263121 SCN9AQ15858 1988 aa27.15■■□□□ 1.94
SMARCB1-201ENST00000263121 FOXD4L1Q9NU39 408 aa27.14■■□□□ 1.94
SMARCB1-201ENST00000263121 GAKO14976 1311 aa27.14■■□□□ 1.93
SMARCB1-201ENST00000263121 SLF2Q8IX21 1173 aa27.14■■□□□ 1.93
SMARCB1-201ENST00000263121 FBXW7Q969H0 707 aa27.14■■□□□ 1.93
SMARCB1-201ENST00000263121 BAG3O95817 575 aa27.13■■□□□ 1.93
SMARCB1-201ENST00000263121 FKBP1AP62942 108 aaKnown RBP27.13■■□□□ 1.93
SMARCB1-201ENST00000263121 DALRD3Q5D0E6 543 aaKnown RBP27.13■■□□□ 1.93
SMARCB1-201ENST00000263121 CERS3Q8IU89 383 aa27.13■■□□□ 1.93
SMARCB1-201ENST00000263121 MB21D2Q8IYB1 491 aaPredicted RBP27.13■■□□□ 1.93
SMARCB1-201ENST00000263121 NCOA7Q8NI08 942 aa27.13■■□□□ 1.93
SMARCB1-201ENST00000263121 ZSCAN31Q96LW9 406 aaPredicted RBP27.13■■□□□ 1.93
SMARCB1-201ENST00000263121 LARP6Q9BRS8 491 aaKnown RBP27.13■■□□□ 1.93
SMARCB1-201ENST00000263121 GPR75-ASB3A0A0A6YYF3 556 aa27.12■■□□□ 1.93
SMARCB1-201ENST00000263121 PPIP5K2O43314 1243 aa27.12■■□□□ 1.93
SMARCB1-201ENST00000263121 STRIP1Q5VSL9 837 aa27.12■■□□□ 1.93
SMARCB1-201ENST00000263121 INTS4Q96HW7 963 aaKnown RBP27.12■■□□□ 1.93
SMARCB1-201ENST00000263121 KCNQ5Q9NR82 932 aa27.12■■□□□ 1.93
SMARCB1-201ENST00000263121 ATP8A2Q9NTI2 1148 aa27.12■■□□□ 1.93
SMARCB1-201ENST00000263121 PPP1R1BQ9UD71 204 aaPredicted RBP27.12■■□□□ 1.93
SMARCB1-201ENST00000263121 Q6ZUG5 572 aa27.11■■□□□ 1.93
SMARCB1-201ENST00000263121 AGXT2Q9BYV1 514 aa27.11■■□□□ 1.93
SMARCB1-201ENST00000263121 SH2B1Q9NRF2 756 aaPredicted RBP27.11■■□□□ 1.93
SMARCB1-201ENST00000263121 ANAPC4Q9UJX5 808 aa27.11■■□□□ 1.93
SMARCB1-201ENST00000263121 TPCN1Q9ULQ1 816 aa27.11■■□□□ 1.93
SMARCB1-201ENST00000263121 LARGE1O95461 756 aa27.11■■□□□ 1.93
SMARCB1-201ENST00000263121 NOL10Q9BSC4 688 aaKnown RBP27.11■■□□□ 1.93
SMARCB1-201ENST00000263121 MXD3Q9BW11 206 aa27.11■■□□□ 1.93
SMARCB1-201ENST00000263121 VPS33BQ9H267 617 aa27.11■■□□□ 1.93
SMARCB1-201ENST00000263121 DCP1AQ9NPI6 582 aaPredicted RBP27.11■■□□□ 1.93
SMARCB1-201ENST00000263121 CHMP5Q9NZZ3 219 aa27.11■■□□□ 1.93
SMARCB1-201ENST00000263121 CIZ1Q9ULV3 898 aaPredicted RBP27.11■■□□□ 1.93
SMARCB1-201ENST00000263121 BAZ2AQ9UIF9 1905 aaKnown RBP27.1■■□□□ 1.93
SMARCB1-201ENST00000263121 CTDSPL2Q05D32 466 aa27.1■■□□□ 1.93
SMARCB1-201ENST00000263121 PPARAQ07869 468 aa27.1■■□□□ 1.93
SMARCB1-201ENST00000263121 DACT2Q5SW24 774 aa27.1■■□□□ 1.93
SMARCB1-201ENST00000263121 RALYLQ86SE5 291 aaKnown RBP27.1■■□□□ 1.93
SMARCB1-201ENST00000263121 FBXL16Q8N461 479 aa27.1■■□□□ 1.93
SMARCB1-201ENST00000263121 SH3RF3Q8TEJ3 882 aaPredicted RBP27.1■■□□□ 1.93
SMARCB1-201ENST00000263121 WDR19Q8NEZ3 1342 aa27.09■■□□□ 1.93
SMARCB1-201ENST00000263121 BTDP43251 543 aa27.09■■□□□ 1.93
SMARCB1-201ENST00000263121 STAG1Q8WVM7 1258 aa27.09■■□□□ 1.93
SMARCB1-201ENST00000263121 TACC3Q9Y6A5 838 aa27.09■■□□□ 1.93
SMARCB1-201ENST00000263121 PSME4Q14997 1843 aa27.09■■□□□ 1.93
SMARCB1-201ENST00000263121 LAMB1P07942 1786 aa27.09■■□□□ 1.93
SMARCB1-201ENST00000263121 NEDD4P46934 1319 aa27.09■■□□□ 1.93
SMARCB1-201ENST00000263121 USP17L3A6NCW0 530 aa27.08■■□□□ 1.93
SMARCB1-201ENST00000263121 USP17L4A6NCW7 530 aa27.08■■□□□ 1.93
SMARCB1-201ENST00000263121 MCM5P33992 734 aa27.08■■□□□ 1.93
SMARCB1-201ENST00000263121 TRDNQ13061 729 aa27.08■■□□□ 1.93
SMARCB1-201ENST00000263121 ME3Q16798 604 aa27.08■■□□□ 1.93
SMARCB1-201ENST00000263121 AKNAD1Q5T1N1 836 aa27.08■■□□□ 1.93
SMARCB1-201ENST00000263121 USP17L1Q7RTZ2 530 aa27.08■■□□□ 1.93
SMARCB1-201ENST00000263121 CWC22Q9HCG8 908 aaKnown RBP27.08■■□□□ 1.93
SMARCB1-201ENST00000263121 MKRN1Q9UHC7 482 aaKnown RBP27.08■■□□□ 1.93
SMARCB1-201ENST00000263121 FER1L6Q2WGJ9 1857 aa27.08■■□□□ 1.93
SMARCB1-201ENST00000263121 CTR9Q6PD62 1173 aa27.08■■□□□ 1.92
SMARCB1-201ENST00000263121 KLHL34Q8N239 644 aa27.08■■□□□ 1.92
SMARCB1-201ENST00000263121 LRRC2Q9BYS8 371 aa27.08■■□□□ 1.92
SMARCB1-201ENST00000263121 TTF2Q9UNY4 1162 aaKnown RBP27.08■■□□□ 1.92
SMARCB1-201ENST00000263121 DAGLAQ9Y4D2 1042 aa27.08■■□□□ 1.92
SMARCB1-201ENST00000263121 CDK5RAP2Q96SN8 1893 aa27.07■■□□□ 1.92
SMARCB1-201ENST00000263121 COL4A5P29400 1685 aa27.07■■□□□ 1.92
SMARCB1-201ENST00000263121 YDJCA8MPS7 323 aa27.07■■□□□ 1.92
SMARCB1-201ENST00000263121 ANTXR2P58335 489 aa27.07■■□□□ 1.92
SMARCB1-201ENST00000263121 PRC1O43663 620 aa27.06■■□□□ 1.92
SMARCB1-201ENST00000263121 PLCG2P16885 1265 aa27.06■■□□□ 1.92
SMARCB1-201ENST00000263121 CNNM2Q9H8M5 875 aa27.06■■□□□ 1.92
SMARCB1-201ENST00000263121 ZNF277Q9NRM2 450 aaPredicted RBP27.06■■□□□ 1.92
SMARCB1-201ENST00000263121 MINDY4BA8MYZ0 360 aa27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 F8W031 263 aaPredicted RBP27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 RHBDL3P58872 404 aa27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 SBK1Q52WX2 424 aa27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 MFSD6Q6ZSS7 791 aa27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 CHST3Q7LGC8 479 aa27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 NKX2-3Q8TAU0 364 aa27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 BRF1Q92994 677 aa27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 RNF41Q9H4P4 317 aaPredicted RBP27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 ARPP21Q9UBL0 812 aaPredicted RBP27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 NAV1Q8NEY1 1877 aa27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 USP17L12C9JPN9 530 aa27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 USP17L21D6R901 530 aa27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 ST3GAL1Q11201 340 aa27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 SPON1Q9HCB6 807 aa27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 INCENPQ9NQS7 918 aa27.05■■□□□ 1.92
SMARCB1-201ENST00000263121 B4E1Z4 1266 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms