RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 TAF7LQ5H9L4 462 aa20.71■□□□□ 0.91
TRAF4-201ENST00000262395 METTL16Q86W50 562 aaKnown RBP20.71■□□□□ 0.91
TRAF4-201ENST00000262395 SYNE4Q8N205 404 aa20.71■□□□□ 0.91
TRAF4-201ENST00000262395 NBPF3Q9H094 633 aa20.71■□□□□ 0.91
TRAF4-201ENST00000262395 PCDHA5Q9Y5H7 936 aa20.71■□□□□ 0.91
TRAF4-201ENST00000262395 IKBKBO14920 756 aa20.7■□□□□ 0.9
TRAF4-201ENST00000262395 TBC1D10CQ8IV04 446 aa20.7■□□□□ 0.9
TRAF4-201ENST00000262395 FAM89AQ96GI7 184 aa20.7■□□□□ 0.9
TRAF4-201ENST00000262395 B4E1Z4 1266 aa20.7■□□□□ 0.9
TRAF4-201ENST00000262395 TMCO3Q6UWJ1 677 aa20.7■□□□□ 0.9
TRAF4-201ENST00000262395 TRMT44Q8IYL2 757 aaKnown RBP20.7■□□□□ 0.9
TRAF4-201ENST00000262395 CCDC82Q8N4S0 544 aa20.7■□□□□ 0.9
TRAF4-201ENST00000262395 ZCCHC17Q9NP64 241 aaKnown RBP20.7■□□□□ 0.9
TRAF4-201ENST00000262395 PHRF1Q9P1Y6 1649 aaKnown RBP20.7■□□□□ 0.9
TRAF4-201ENST00000262395 SLIT3O75094 1523 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 CNNM3Q8NE01 707 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 CHMP4CQ96CF2 233 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 WDR24Q96S15 920 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 INTS13Q9NVM9 706 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 SCN11AQ9UI33 1791 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 ATP2B1P20020 1258 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 BMP6P22004 513 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 TRDNQ13061 729 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 OLFM4Q6UX06 510 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 APPBP2Q92624 585 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 TUBE1Q9UJT0 475 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 NWD2Q9ULI1 1742 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 FER1L4A9Z1Z3 1794 aa20.69■□□□□ 0.9
TRAF4-201ENST00000262395 GNG11P61952 73 aa20.68■□□□□ 0.9
TRAF4-201ENST00000262395 NFXL1Q6ZNB6 911 aa20.68■□□□□ 0.9
TRAF4-201ENST00000262395 VSTM4Q8IW00 320 aa20.68■□□□□ 0.9
TRAF4-201ENST00000262395 GRAMD1CQ8IYS0 662 aa20.68■□□□□ 0.9
TRAF4-201ENST00000262395 DESI2Q9BSY9 194 aa20.68■□□□□ 0.9
TRAF4-201ENST00000262395 PARP3Q9Y6F1 533 aa20.68■□□□□ 0.9
TRAF4-201ENST00000262395 VWA3AA6NCI4 1184 aa20.68■□□□□ 0.9
TRAF4-201ENST00000262395 GRIN1Q05586 938 aa20.68■□□□□ 0.9
TRAF4-201ENST00000262395 PTPAQ15257 358 aa20.68■□□□□ 0.9
TRAF4-201ENST00000262395 ZSWIM4Q9H7M6 989 aa20.68■□□□□ 0.9
TRAF4-201ENST00000262395 PPP2R2CQ9Y2T4 447 aa20.68■□□□□ 0.9
TRAF4-201ENST00000262395 TEX35Q5T0J7 233 aa20.67■□□□□ 0.9
TRAF4-201ENST00000262395 TAF3Q5VWG9 929 aa20.67■□□□□ 0.9
TRAF4-201ENST00000262395 CCDC34Q96HJ3 373 aa20.67■□□□□ 0.9
TRAF4-201ENST00000262395 PHLPP2Q6ZVD8 1323 aa20.67■□□□□ 0.9
TRAF4-201ENST00000262395 IDH1O75874 414 aaKnown RBP20.67■□□□□ 0.9
TRAF4-201ENST00000262395 KARSQ15046 597 aaKnown RBP20.67■□□□□ 0.9
TRAF4-201ENST00000262395 TOGARAM2Q6ZUX3 1019 aa20.67■□□□□ 0.9
TRAF4-201ENST00000262395 HPSEQ9Y251 543 aa20.67■□□□□ 0.9
TRAF4-201ENST00000262395 TADA3O75528 432 aa20.67■□□□□ 0.9
TRAF4-201ENST00000262395 SLC9C2Q5TAH2 1124 aa20.67■□□□□ 0.9
TRAF4-201ENST00000262395 FBXL16Q8N461 479 aa20.67■□□□□ 0.9
TRAF4-201ENST00000262395 KCNH3Q9ULD8 1083 aa20.67■□□□□ 0.9
TRAF4-201ENST00000262395 ANGEL1Q9UNK9 670 aaKnown RBP20.67■□□□□ 0.9
TRAF4-201ENST00000262395 CBFA2T2O43439 604 aa20.66■□□□□ 0.9
TRAF4-201ENST00000262395 PROSER2Q86WR7 435 aaPredicted RBP20.66■□□□□ 0.9
TRAF4-201ENST00000262395 MAP3K14Q99558 947 aa20.66■□□□□ 0.9
TRAF4-201ENST00000262395 ADAMTS7Q9UKP4 1686 aa20.65■□□□□ 0.9
TRAF4-201ENST00000262395 CCDC66A2RUB6 948 aa20.65■□□□□ 0.9
TRAF4-201ENST00000262395 KCNJ6P48051 423 aa20.65■□□□□ 0.9
TRAF4-201ENST00000262395 CCDC102BQ68D86 513 aa20.65■□□□□ 0.9
TRAF4-201ENST00000262395 APOA5Q6Q788 366 aa20.65■□□□□ 0.9
TRAF4-201ENST00000262395 CMTR1Q8N1G2 835 aaKnown RBP20.65■□□□□ 0.9
TRAF4-201ENST00000262395 CCDC191Q8NCU4 936 aa20.65■□□□□ 0.9
TRAF4-201ENST00000262395 SLC26A6Q9BXS9 759 aa20.65■□□□□ 0.9
TRAF4-201ENST00000262395 IRX2Q9BZI1 471 aaPredicted RBP20.65■□□□□ 0.9
TRAF4-201ENST00000262395 ARGLU1Q9NWB6 273 aaPredicted RBP20.65■□□□□ 0.9
TRAF4-201ENST00000262395 ZMYM6O95789 1325 aa20.65■□□□□ 0.9
TRAF4-201ENST00000262395 RANBP6O60518 1105 aaKnown RBP20.65■□□□□ 0.9
TRAF4-201ENST00000262395 PRR29P0C7W0 189 aa20.65■□□□□ 0.9
TRAF4-201ENST00000262395 MCAMP43121 646 aa20.65■□□□□ 0.9
TRAF4-201ENST00000262395 KRBA2Q6ZNG9 492 aa20.65■□□□□ 0.9
TRAF4-201ENST00000262395 TMEM139Q8IV31 216 aa20.65■□□□□ 0.9
TRAF4-201ENST00000262395 NEK11Q8NG66 645 aa20.65■□□□□ 0.9
TRAF4-201ENST00000262395 ZRANB2O95218 330 aaKnown RBP eCLIP20.64■□□□□ 0.9
TRAF4-201ENST00000262395 FMR1Q06787 632 aaKnown RBP eCLIP20.64■□□□□ 0.9
TRAF4-201ENST00000262395 RESP18Q5W5W9 173 aa20.64■□□□□ 0.9
TRAF4-201ENST00000262395 BAG1Q99933 345 aaPredicted RBP20.64■□□□□ 0.9
TRAF4-201ENST00000262395 KCNJ14Q9UNX9 436 aa20.64■□□□□ 0.9
TRAF4-201ENST00000262395 SASH3O75995 380 aa20.64■□□□□ 0.89
TRAF4-201ENST00000262395 CIAO1O76071 339 aa20.64■□□□□ 0.89
TRAF4-201ENST00000262395 ZFYP08048 801 aaPredicted RBP20.64■□□□□ 0.89
TRAF4-201ENST00000262395 CASQ1P31415 396 aa20.64■□□□□ 0.89
TRAF4-201ENST00000262395 IARSP41252 1262 aaKnown RBP20.64■□□□□ 0.89
TRAF4-201ENST00000262395 MTF1Q14872 753 aa20.64■□□□□ 0.89
TRAF4-201ENST00000262395 LRRFIP1Q32MZ4 808 aaKnown RBP20.64■□□□□ 0.89
TRAF4-201ENST00000262395 PLCD3Q8N3E9 789 aa20.64■□□□□ 0.89
TRAF4-201ENST00000262395 JMYQ8N9B5 988 aa20.64■□□□□ 0.89
TRAF4-201ENST00000262395 GYS2P54840 703 aa20.64■□□□□ 0.89
TRAF4-201ENST00000262395 TRIM29Q14134 588 aa20.64■□□□□ 0.89
TRAF4-201ENST00000262395 TIGD1Q96MW7 591 aa20.64■□□□□ 0.89
TRAF4-201ENST00000262395 BTBD18B2RXH4 712 aa20.63■□□□□ 0.89
TRAF4-201ENST00000262395 GUCY1A2P33402 732 aa20.63■□□□□ 0.89
TRAF4-201ENST00000262395 NFE2L3Q9Y4A8 694 aa20.63■□□□□ 0.89
TRAF4-201ENST00000262395 GOLGA8AA7E2F4 631 aa20.63■□□□□ 0.89
TRAF4-201ENST00000262395 SH2B2O14492 632 aaPredicted RBP20.63■□□□□ 0.89
TRAF4-201ENST00000262395 CCP110O43303 1012 aa20.63■□□□□ 0.89
TRAF4-201ENST00000262395 METTL24Q5JXM2 366 aa20.63■□□□□ 0.89
TRAF4-201ENST00000262395 ZKSCAN3Q9BRR0 538 aa20.63■□□□□ 0.89
TRAF4-201ENST00000262395 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.63■□□□□ 0.89
TRAF4-201ENST00000262395 AKAP2Q9Y2D5 859 aa20.63■□□□□ 0.89
TRAF4-201ENST00000262395 ZBTB43O43298 467 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms