RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 CMA1P23946 247 aa8.26□□□□□ -1.09
CSDE1-201ENST00000261443 OTUD7BQ6GQQ9 843 aa8.26□□□□□ -1.09
CSDE1-201ENST00000261443 SYNE3Q6ZMZ3 975 aa8.26□□□□□ -1.09
CSDE1-201ENST00000261443 CCDC129Q6ZRS4 1044 aa8.26□□□□□ -1.09
CSDE1-201ENST00000261443 CTAGE6Q86UF2 777 aa8.26□□□□□ -1.09
CSDE1-201ENST00000261443 CTAGE4Q8IX94 777 aa8.26□□□□□ -1.09
CSDE1-201ENST00000261443 TUBE1Q9UJT0 475 aa8.26□□□□□ -1.09
CSDE1-201ENST00000261443 USP54Q70EL1 1684 aa8.26□□□□□ -1.09
CSDE1-201ENST00000261443 CTAGE9A4FU28 777 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 SYKP43405 635 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 FBXW10Q5XX13 1052 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 CTCFLQ8NI51 663 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-201ENST00000261443 SMARCC1Q92922 1105 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-201ENST00000261443 SLIT1O75093 1534 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 SALL1Q9NSC2 1324 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 SOWAHDA6NJG2 315 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 EBAG9O00559 213 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 CCT5P48643 541 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 PNOCQ13519 176 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 CLIC6Q96NY7 704 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 C19orf44Q9H6X5 657 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 CHPF2Q9P2E5 772 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 FAM169AQ9Y6X4 670 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 COL15A1P39059 1388 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 SYF2O95926 243 aaKnown RBP8.25□□□□□ -1.09
CSDE1-201ENST00000261443 PIP4K2BP78356 416 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 SETQ01105 290 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-201ENST00000261443 STOX1Q6ZVD7 989 aa8.25□□□□□ -1.09
CSDE1-201ENST00000261443 PRPF6O94906 941 aaKnown RBP8.24□□□□□ -1.09
CSDE1-201ENST00000261443 TFRCP02786 760 aaKnown RBP8.24□□□□□ -1.09
CSDE1-201ENST00000261443 MARCKSP29966 332 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-201ENST00000261443 AARSP49588 968 aaKnown RBP eCLIP8.24□□□□□ -1.09
CSDE1-201ENST00000261443 MYSM1Q5VVJ2 828 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 IGSF22Q8N9C0 903 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 IL17REQ8NFR9 667 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 C8orf76Q96K31 380 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 EYA1Q99502 592 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.24□□□□□ -1.09
CSDE1-201ENST00000261443 VIPAS39Q9H9C1 493 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 ADGRG1Q9Y653 693 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 DIP2AQ14689 1571 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 PLEKHG1Q9ULL1 1385 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 MROH7-TTC4A0A0A0MT08 1334 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 A0A0U1RQJ8 604 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 AKR1B15C9JRZ8 316 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-201ENST00000261443 PDIA3P30101 505 aaKnown RBP8.24□□□□□ -1.09
CSDE1-201ENST00000261443 TDO2P48775 406 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 TEFQ10587 303 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 ANO1Q5XXA6 986 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 KCNV1Q6PIU1 500 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 ARHGEF25Q86VW2 580 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 ATRIPQ8WXE1 791 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 CDHR2Q9BYE9 1310 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 ANXA1P04083 346 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 FDPSP14324 419 aaKnown RBP8.24□□□□□ -1.09
CSDE1-201ENST00000261443 INPP5BP32019 993 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 WHAMMP3Q1A5X7 153 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 BRAPQ7Z569 592 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 RPAINQ86UA6 219 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 POTEDQ86YR6 584 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 SLC35F6Q8N357 371 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 BABAM1Q9NWV8 329 aa8.24□□□□□ -1.09
CSDE1-201ENST00000261443 ACEP12821 1306 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 CEBPAP49715 358 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-201ENST00000261443 AKAP17AQ02040 695 aaKnown RBP8.23□□□□□ -1.09
CSDE1-201ENST00000261443 MCMDC2Q4G0Z9 681 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 WDR93Q6P2C0 686 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 NOA1Q8NC60 698 aaKnown RBP8.23□□□□□ -1.09
CSDE1-201ENST00000261443 CCDC148Q8NFR7 591 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 ZNF274Q96GC6 653 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-201ENST00000261443 PANX2Q96RD6 677 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 RAI14Q9P0K7 980 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 PDE4BQ07343 736 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 STIM1Q13586 685 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 MAP9Q49MG5 647 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 RAD9BQ6WBX8 426 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 GBP6Q6ZN66 633 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 CHST3Q7LGC8 479 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 RIN2Q8WYP3 895 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-201ENST00000261443 FAM212AQ96EL1 285 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 NAPGQ99747 312 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-201ENST00000261443 NFE2L3Q9Y4A8 694 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 KDRP35968 1356 aa8.23□□□□□ -1.09
CSDE1-201ENST00000261443 SHTN1A0MZ66 631 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 PLEKHG3A1L390 1219 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 SHOX2O60902 331 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-201ENST00000261443 CHGBP05060 677 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 EXOSC10Q01780 885 aaKnown RBP8.22□□□□□ -1.09
CSDE1-201ENST00000261443 PPFIBP1Q86W92 1011 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 FAM76AQ8TAV0 307 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 CPLX3Q8WVH0 158 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 JPH2Q9BR39 696 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-201ENST00000261443 KAT14Q9H8E8 782 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 HOOK1Q9UJC3 728 aaKnown RBP8.22□□□□□ -1.09
CSDE1-201ENST00000261443 HPCAL4Q9UM19 191 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 NDUFB9Q9Y6M9 179 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 SBNO1A3KN83 1393 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 LAMA4Q16363 1823 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 ZNF609O15014 1411 aa8.22□□□□□ -1.09
CSDE1-201ENST00000261443 CDC27P30260 824 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms