RNA–Protein interactions for RNA: ENST00000261205.8

SYT1-201, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 4,808 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-201ENST00000261205 FAM114A1Q8IWE2 563 aa18.19■□□□□ 0.5
SYT1-201ENST00000261205 BSDC1Q9NW68 430 aaPredicted RBP18.19■□□□□ 0.5
SYT1-201ENST00000261205 SAP30BPQ9UHR5 308 aaKnown RBP18.19■□□□□ 0.5
SYT1-201ENST00000261205 CETN1Q12798 172 aa18.19■□□□□ 0.5
SYT1-201ENST00000261205 CCDC129Q6ZRS4 1044 aa18.19■□□□□ 0.5
SYT1-201ENST00000261205 USP48Q86UV5 1035 aa18.19■□□□□ 0.5
SYT1-201ENST00000261205 CD163L1Q9NR16 1453 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 POTEJP0CG39 1038 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 HSPA1LP34931 641 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 GYG1P46976 350 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 KLHL40Q2TBA0 621 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 DCAF15Q66K64 600 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 USP40Q9NVE5 1235 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 LRRC7Q96NW7 1537 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 PPLO60437 1756 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 COL15A1P39059 1388 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 CPS1P31327 1500 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 SYKP43405 635 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 POLA2Q14181 598 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 STX1AQ16623 288 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 FAM182BQ5T319 152 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 ATP8A2Q9NTI2 1148 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 MYO6Q9UM54 1294 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 SAMM50Q9Y512 469 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 SYCE3A1L190 88 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 CCDC93Q567U6 631 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 FAM43AQ8N2R8 423 aa18.18■□□□□ 0.5
SYT1-201ENST00000261205 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.18■□□□□ 0.5
SYT1-201ENST00000261205 MRPS27Q92552 414 aaKnown RBP18.18■□□□□ 0.5
SYT1-201ENST00000261205 NRKQ7Z2Y5 1582 aa18.17■□□□□ 0.5
SYT1-201ENST00000261205 BCAMP50895 628 aa18.17■□□□□ 0.5
SYT1-201ENST00000261205 RTKN2Q8IZC4 609 aa18.17■□□□□ 0.5
SYT1-201ENST00000261205 CFAP100Q494V2 611 aa18.17■□□□□ 0.5
SYT1-201ENST00000261205 MASTLQ96GX5 879 aa18.17■□□□□ 0.5
SYT1-201ENST00000261205 CAMK4Q16566 473 aa18.17■□□□□ 0.5
SYT1-201ENST00000261205 SPATA31A5Q5VU36 1347 aa18.17■□□□□ 0.5
SYT1-201ENST00000261205 SPATA31A7Q8IWB4 1347 aa18.17■□□□□ 0.5
SYT1-201ENST00000261205 ZFYVE27Q5T4F4 411 aa18.16■□□□□ 0.5
SYT1-201ENST00000261205 TTLL11Q8NHH1 800 aa18.16■□□□□ 0.5
SYT1-201ENST00000261205 TBCAO75347 108 aaKnown RBP18.16■□□□□ 0.5
SYT1-201ENST00000261205 PDE4CQ08493 712 aa18.16■□□□□ 0.5
SYT1-201ENST00000261205 RILPL1Q5EBL4 403 aa18.16■□□□□ 0.5
SYT1-201ENST00000261205 SUSD4Q5VX71 490 aa18.16■□□□□ 0.5
SYT1-201ENST00000261205 WWC3Q9ULE0 1092 aa18.16■□□□□ 0.5
SYT1-201ENST00000261205 RAB3GAP1Q15042 981 aa18.16■□□□□ 0.5
SYT1-201ENST00000261205 ARGLU1Q9NWB6 273 aaPredicted RBP18.16■□□□□ 0.5
SYT1-201ENST00000261205 PTPN12Q05209 780 aaKnown RBP18.16■□□□□ 0.5
SYT1-201ENST00000261205 NOM1Q5C9Z4 860 aaKnown RBP18.16■□□□□ 0.5
SYT1-201ENST00000261205 MCTP2Q6DN12 878 aa18.16■□□□□ 0.5
SYT1-201ENST00000261205 CARMIL3Q8ND23 1372 aa18.15■□□□□ 0.5
SYT1-201ENST00000261205 PPARAQ07869 468 aa18.15■□□□□ 0.5
SYT1-201ENST00000261205 TGFBRAP1Q8WUH2 860 aa18.15■□□□□ 0.5
SYT1-201ENST00000261205 STK24Q9Y6E0 443 aa18.15■□□□□ 0.5
SYT1-201ENST00000261205 SPTLC2O15270 562 aa18.15■□□□□ 0.5
SYT1-201ENST00000261205 IDEP14735 1019 aa18.15■□□□□ 0.5
SYT1-201ENST00000261205 KRT79Q5XKE5 535 aa18.15■□□□□ 0.5
SYT1-201ENST00000261205 CHST3Q7LGC8 479 aa18.15■□□□□ 0.5
SYT1-201ENST00000261205 MST1RQ04912 1400 aa18.15■□□□□ 0.5
SYT1-201ENST00000261205 DBNLQ9UJU6 430 aaKnown RBP18.15■□□□□ 0.5
SYT1-201ENST00000261205 AS3MTQ9HBK9 375 aa18.15■□□□□ 0.5
SYT1-201ENST00000261205 IGSF3O75054 1194 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 NKX1-1Q15270 411 aaPredicted RBP18.14■□□□□ 0.49
SYT1-201ENST00000261205 GPR162Q16538 588 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 MAPKAPK5Q8IW41 473 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 ISCA1Q9BUE6 129 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 USP37Q86T82 979 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 IFNL3Q8IZI9 196 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 GOPCQ9HD26 462 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 KDM4FA0A1W2PPD8 638 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 MMP10P09238 476 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 CCDC150Q8NCX0 1101 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 CCDC17Q96LX7 622 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 PHKA1P46020 1223 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 TXNRD1Q16881 649 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 VPS36Q86VN1 386 aa18.14■□□□□ 0.49
SYT1-201ENST00000261205 PUS3Q9BZE2 481 aaKnown RBP18.14■□□□□ 0.49
SYT1-201ENST00000261205 MROH1Q8NDA8 1641 aa18.13■□□□□ 0.49
SYT1-201ENST00000261205 STAT6P42226 847 aa18.13■□□□□ 0.49
SYT1-201ENST00000261205 SLC1A4P43007 532 aa18.13■□□□□ 0.49
SYT1-201ENST00000261205 COA1Q9GZY4 146 aa18.13■□□□□ 0.49
SYT1-201ENST00000261205 ACBD3Q9H3P7 528 aa18.13■□□□□ 0.49
SYT1-201ENST00000261205 SRP68Q9UHB9 627 aaKnown RBP18.13■□□□□ 0.49
SYT1-201ENST00000261205 TTLL6Q8N841 843 aa18.12■□□□□ 0.49
SYT1-201ENST00000261205 RPAP1Q9BWH6 1393 aaPredicted RBP18.12■□□□□ 0.49
SYT1-201ENST00000261205 USP17L12C9JPN9 530 aa18.12■□□□□ 0.49
SYT1-201ENST00000261205 USP17L21D6R901 530 aa18.12■□□□□ 0.49
SYT1-201ENST00000261205 UVSSAQ2YD98 709 aa18.12■□□□□ 0.49
SYT1-201ENST00000261205 KLHL10Q6JEL2 608 aa18.12■□□□□ 0.49
SYT1-201ENST00000261205 UBA5Q9GZZ9 404 aa18.12■□□□□ 0.49
SYT1-201ENST00000261205 EXOC1Q9NV70 894 aa18.12■□□□□ 0.49
SYT1-201ENST00000261205 E7EWF7 191 aa18.12■□□□□ 0.49
SYT1-201ENST00000261205 TFAP4Q01664 338 aa18.12■□□□□ 0.49
SYT1-201ENST00000261205 ZMYM1Q5SVZ6 1142 aa18.12■□□□□ 0.49
SYT1-201ENST00000261205 CHURC1Q8WUH1 139 aa18.12■□□□□ 0.49
SYT1-201ENST00000261205 SPAG1Q07617 926 aa18.12■□□□□ 0.49
SYT1-201ENST00000261205 CAGE1Q8TC20 777 aa18.12■□□□□ 0.49
SYT1-201ENST00000261205 ZNF274Q96GC6 653 aaPredicted RBP18.11■□□□□ 0.49
SYT1-201ENST00000261205 ARHGAP27Q6ZUM4 889 aa18.11■□□□□ 0.49
SYT1-201ENST00000261205 SEC31BQ9NQW1 1179 aa18.11■□□□□ 0.49
SYT1-201ENST00000261205 ZBED4O75132 1171 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms