RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 EPS15P42566 896 aa19■□□□□ 0.63
CCDC90B-201ENST00000260054 MMP14P50281 582 aa19■□□□□ 0.63
CCDC90B-201ENST00000260054 PPP4CP60510 307 aa19■□□□□ 0.63
CCDC90B-201ENST00000260054 CCDC171Q6TFL3 1326 aa18.99■□□□□ 0.63
CCDC90B-201ENST00000260054 SAMD7Q7Z3H4 446 aa18.99■□□□□ 0.63
CCDC90B-201ENST00000260054 PRMT6Q96LA8 375 aaPredicted RBP18.99■□□□□ 0.63
CCDC90B-201ENST00000260054 STRBPQ96SI9 672 aaKnown RBP18.99■□□□□ 0.63
CCDC90B-201ENST00000260054 SPDYE2BA6NHP3 402 aa18.98■□□□□ 0.63
CCDC90B-201ENST00000260054 BAG3O95817 575 aa18.98■□□□□ 0.63
CCDC90B-201ENST00000260054 SPDYE6P0CI01 402 aa18.98■□□□□ 0.63
CCDC90B-201ENST00000260054 RHBDL3P58872 404 aa18.98■□□□□ 0.63
CCDC90B-201ENST00000260054 DLGAP5Q15398 846 aa18.98■□□□□ 0.63
CCDC90B-201ENST00000260054 MTMR14Q8NCE2 650 aa18.98■□□□□ 0.63
CCDC90B-201ENST00000260054 ZBED3Q96IU2 234 aaPredicted RBP18.98■□□□□ 0.63
CCDC90B-201ENST00000260054 NOL10Q9BSC4 688 aaKnown RBP18.98■□□□□ 0.63
CCDC90B-201ENST00000260054 H7C1D1 291 aa18.98■□□□□ 0.63
CCDC90B-201ENST00000260054 TBC1D10BQ4KMP7 808 aaPredicted RBP18.98■□□□□ 0.63
CCDC90B-201ENST00000260054 RBM26Q5T8P6 1007 aaKnown RBP18.98■□□□□ 0.63
CCDC90B-201ENST00000260054 SH3RF3Q8TEJ3 882 aaPredicted RBP18.98■□□□□ 0.63
CCDC90B-201ENST00000260054 WNT10BO00744 389 aa18.97■□□□□ 0.63
CCDC90B-201ENST00000260054 FOXP2O15409 715 aa18.97■□□□□ 0.63
CCDC90B-201ENST00000260054 SEC24BO95487 1268 aa18.97■□□□□ 0.63
CCDC90B-201ENST00000260054 LMOD1P29536 600 aaPredicted RBP18.97■□□□□ 0.63
CCDC90B-201ENST00000260054 VPS53Q5VIR6 699 aa18.97■□□□□ 0.63
CCDC90B-201ENST00000260054 CDC42EP5Q6NZY7 148 aa18.97■□□□□ 0.63
CCDC90B-201ENST00000260054 PRKAB2O43741 272 aa18.96■□□□□ 0.63
CCDC90B-201ENST00000260054 KIF4BQ2VIQ3 1234 aa18.96■□□□□ 0.63
CCDC90B-201ENST00000260054 NBPF9Q3BBW0 867 aa18.96■□□□□ 0.63
CCDC90B-201ENST00000260054 TRPM4Q8TD43 1214 aa18.96■□□□□ 0.63
CCDC90B-201ENST00000260054 TDRD3Q9H7E2 651 aaKnown RBP18.96■□□□□ 0.63
CCDC90B-201ENST00000260054 USP40Q9NVE5 1235 aa18.96■□□□□ 0.63
CCDC90B-201ENST00000260054 POTECB2RU33 542 aa18.95■□□□□ 0.62
CCDC90B-201ENST00000260054 MFAP1P55081 439 aaKnown RBP18.95■□□□□ 0.62
CCDC90B-201ENST00000260054 BACH2Q9BYV9 841 aa18.95■□□□□ 0.62
CCDC90B-201ENST00000260054 WDR90Q96KV7 1748 aa18.95■□□□□ 0.62
CCDC90B-201ENST00000260054 PLCG2P16885 1265 aa18.95■□□□□ 0.62
CCDC90B-201ENST00000260054 PTH1RQ03431 593 aa18.95■□□□□ 0.62
CCDC90B-201ENST00000260054 CERS3Q8IU89 383 aa18.95■□□□□ 0.62
CCDC90B-201ENST00000260054 SDR42E1Q8WUS8 393 aa18.95■□□□□ 0.62
CCDC90B-201ENST00000260054 CRNKL1Q9BZJ0 848 aaKnown RBP18.95■□□□□ 0.62
CCDC90B-201ENST00000260054 LSG1Q9H089 658 aaKnown RBP18.95■□□□□ 0.62
CCDC90B-201ENST00000260054 ANO2Q9NQ90 1003 aa18.95■□□□□ 0.62
CCDC90B-201ENST00000260054 HACL1Q9UJ83 578 aa18.95■□□□□ 0.62
CCDC90B-201ENST00000260054 SLC4A4Q9Y6R1 1079 aa18.95■□□□□ 0.62
CCDC90B-201ENST00000260054 HSPD1P10809 573 aaKnown RBP18.94■□□□□ 0.62
CCDC90B-201ENST00000260054 HIRAP54198 1017 aaPredicted RBP18.94■□□□□ 0.62
CCDC90B-201ENST00000260054 CACNB3P54284 484 aa18.94■□□□□ 0.62
CCDC90B-201ENST00000260054 TEX11Q8IYF3 940 aa18.94■□□□□ 0.62
CCDC90B-201ENST00000260054 ADARB2Q9NS39 739 aaKnown RBP18.94■□□□□ 0.62
CCDC90B-201ENST00000260054 CLRN2A0PK11 232 aa18.93■□□□□ 0.62
CCDC90B-201ENST00000260054 GSG1L2A8MUP6 293 aa18.93■□□□□ 0.62
CCDC90B-201ENST00000260054 WDHD1O75717 1129 aaPredicted RBP18.93■□□□□ 0.62
CCDC90B-201ENST00000260054 GNAT2P19087 354 aa18.93■□□□□ 0.62
CCDC90B-201ENST00000260054 KIAA1211Q6ZU35 1233 aa18.93■□□□□ 0.62
CCDC90B-201ENST00000260054 EPB41L4AQ9HCS5 686 aaPredicted RBP18.93■□□□□ 0.62
CCDC90B-201ENST00000260054 ZNF70Q9UC06 446 aaPredicted RBP18.93■□□□□ 0.62
CCDC90B-201ENST00000260054 ASTN2O75129 1339 aaPredicted RBP18.93■□□□□ 0.62
CCDC90B-201ENST00000260054 IQCA1LA6NCM1 817 aa18.92■□□□□ 0.62
CCDC90B-201ENST00000260054 PATL2C9JE40 543 aaKnown RBP18.92■□□□□ 0.62
CCDC90B-201ENST00000260054 REC8O95072 547 aa18.92■□□□□ 0.62
CCDC90B-201ENST00000260054 NFIAQ12857 509 aa18.92■□□□□ 0.62
CCDC90B-201ENST00000260054 SPDYE2Q495Y8 402 aa18.92■□□□□ 0.62
CCDC90B-201ENST00000260054 TGFBRAP1Q8WUH2 860 aa18.92■□□□□ 0.62
CCDC90B-201ENST00000260054 DSCC1Q9BVC3 393 aa18.92■□□□□ 0.62
CCDC90B-201ENST00000260054 DDX4Q9NQI0 724 aaKnown RBP18.92■□□□□ 0.62
CCDC90B-201ENST00000260054 SCN4AP35499 1836 aa18.92■□□□□ 0.62
CCDC90B-201ENST00000260054 EPHX2P34913 555 aa18.92■□□□□ 0.62
CCDC90B-201ENST00000260054 TAF1DQ9H5J8 278 aaPredicted RBP18.92■□□□□ 0.62
CCDC90B-201ENST00000260054 ECM29Q5VYK3 1845 aa18.91■□□□□ 0.62
CCDC90B-201ENST00000260054 CDK5RAP2Q96SN8 1893 aa18.91■□□□□ 0.62
CCDC90B-201ENST00000260054 MYO1BO43795 1136 aa18.91■□□□□ 0.62
CCDC90B-201ENST00000260054 APPP05067 770 aa18.91■□□□□ 0.62
CCDC90B-201ENST00000260054 USP5P45974 858 aa18.91■□□□□ 0.62
CCDC90B-201ENST00000260054 MAPKAPK5Q8IW41 473 aa18.91■□□□□ 0.62
CCDC90B-201ENST00000260054 MAP4K1Q92918 833 aa18.91■□□□□ 0.62
CCDC90B-201ENST00000260054 IDI2Q9BXS1 227 aa18.91■□□□□ 0.62
CCDC90B-201ENST00000260054 DCP1AQ9NPI6 582 aaPredicted RBP18.91■□□□□ 0.62
CCDC90B-201ENST00000260054 MKRN1Q9UHC7 482 aaKnown RBP18.91■□□□□ 0.62
CCDC90B-201ENST00000260054 FLT1P17948 1338 aa18.91■□□□□ 0.62
CCDC90B-201ENST00000260054 RPAP1Q9BWH6 1393 aaPredicted RBP18.9■□□□□ 0.62
CCDC90B-201ENST00000260054 PICALMQ13492 652 aa18.9■□□□□ 0.62
CCDC90B-201ENST00000260054 IFNL3Q8IZI9 196 aa18.9■□□□□ 0.62
CCDC90B-201ENST00000260054 ZNF526Q8TF50 670 aaPredicted RBP18.9■□□□□ 0.62
CCDC90B-201ENST00000260054 ATP8A2Q9NTI2 1148 aa18.9■□□□□ 0.62
CCDC90B-201ENST00000260054 FAM198AQ9UFP1 575 aa18.9■□□□□ 0.62
CCDC90B-201ENST00000260054 USP50Q70EL3 339 aaPredicted RBP18.89■□□□□ 0.61
CCDC90B-201ENST00000260054 RRAGCQ9HB90 399 aa18.89■□□□□ 0.61
CCDC90B-201ENST00000260054 VEZTQ9HBM0 779 aa18.89■□□□□ 0.61
CCDC90B-201ENST00000260054 TMOD2Q9NZR1 351 aa18.89■□□□□ 0.61
CCDC90B-201ENST00000260054 FOCADQ5VW36 1801 aa18.89■□□□□ 0.61
CCDC90B-201ENST00000260054 TCP10L2B9ZVM9 353 aa18.89■□□□□ 0.61
CCDC90B-201ENST00000260054 FGAP02671 866 aa18.89■□□□□ 0.61
CCDC90B-201ENST00000260054 USP26Q9BXU7 913 aa18.89■□□□□ 0.61
CCDC90B-201ENST00000260054 NMRK2Q9NPI5 230 aa18.89■□□□□ 0.61
CCDC90B-201ENST00000260054 RBM8AQ9Y5S9 174 aaKnown RBP18.89■□□□□ 0.61
CCDC90B-201ENST00000260054 TDO2P48775 406 aa18.88■□□□□ 0.61
CCDC90B-201ENST00000260054 TCP10Q12799 353 aa18.88■□□□□ 0.61
CCDC90B-201ENST00000260054 ALX1Q15699 326 aa18.88■□□□□ 0.61
CCDC90B-201ENST00000260054 ANGEL2Q5VTE6 544 aaKnown RBP18.88■□□□□ 0.61
CCDC90B-201ENST00000260054 GIMAP6Q6P9H5 292 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms