RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 GTPBP4Q9BZE4 634 aaKnown RBP15.11■□□□□ 0.01
ALPK3-201ENST00000258888 LETM2Q2VYF4 491 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 OTUD7BQ6GQQ9 843 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 ZNF518AQ6AHZ1 1483 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 APBB1IPQ7Z5R6 666 aaPredicted RBP15.11■□□□□ 0.01
ALPK3-201ENST00000258888 SAP30BPQ9UHR5 308 aaKnown RBP15.11■□□□□ 0.01
ALPK3-201ENST00000258888 WDR7Q9Y4E6 1490 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 DCAF5Q96JK2 942 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 OGFRQ9NZT2 677 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 SNX14Q9Y5W7 946 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 ZNF75DP51815 510 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 TNNI3KQ59H18 835 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 TMEM87AQ8NBN3 555 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 KCNK9Q9NPC2 374 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 MAPK8IP1Q9UQF2 711 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 FPGT-TNNI3KV9GXZ4 949 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 PABPN1LA6NDY0 278 aaKnown RBP15.11■□□□□ 0.01
ALPK3-201ENST00000258888 HOXC9P31274 260 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 CCDC114Q96M63 670 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 UNC13AQ9UPW8 1703 aa15.11■□□□□ 0.01
ALPK3-201ENST00000258888 TUBB4BP68371 445 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 SP4Q02446 784 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 OGFOD1Q8N543 542 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 MAP3K19Q56UN5 1328 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 A0A1B0GUL7 405 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 GADD45BO75293 160 aaPredicted RBP15.1■□□□□ 0.01
ALPK3-201ENST00000258888 HPDP32754 393 aaPredicted RBP15.1■□□□□ 0.01
ALPK3-201ENST00000258888 RRAGDQ9NQL2 400 aaPredicted RBP15.1■□□□□ 0.01
ALPK3-201ENST00000258888 HDAC9Q9UKV0 1011 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 SPATA24Q86W54 205 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 NSFL1CQ9UNZ2 370 aaKnown RBP15.1■□□□□ 0.01
ALPK3-201ENST00000258888 NDUFB9Q9Y6M9 179 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 KDM2BQ8NHM5 1336 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 MTRF1LQ9UGC7 380 aaKnown RBP15.1■□□□□ 0.01
ALPK3-201ENST00000258888 NYXQ9GZU5 481 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 VPS16Q9H269 839 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 DMRT2Q9Y5R5 561 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 AOX1Q06278 1338 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 ERO1AQ96HE7 468 aa15.1■□□□□ 0.01
ALPK3-201ENST00000258888 TIMM10P62072 90 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 CBX8Q9HC52 389 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 RNASE9P60153 205 aaKnown RBP15.09■□□□□ 0.01
ALPK3-201ENST00000258888 FANCCQ00597 558 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 NAPGQ99747 312 aaPredicted RBP15.09■□□□□ 0.01
ALPK3-201ENST00000258888 DBNDD2Q9BQY9 259 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 NOC4LQ9BVI4 516 aaKnown RBP15.09■□□□□ 0.01
ALPK3-201ENST00000258888 RILPL1Q5EBL4 403 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 CFAP58Q5T655 872 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 FAM89AQ96GI7 184 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 TCOF1Q13428 1488 aaKnown RBP15.09■□□□□ 0.01
ALPK3-201ENST00000258888 DDB1Q16531 1140 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.09■□□□□ 0.01
ALPK3-201ENST00000258888 SMC6Q96SB8 1091 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 MAST1Q9Y2H9 1570 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 PIK3AP1Q6ZUJ8 805 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 ANGEL1Q9UNK9 670 aaKnown RBP15.09■□□□□ 0.01
ALPK3-201ENST00000258888 ELF2Q15723 593 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 UTP14CQ5TAP6 766 aaKnown RBP15.09■□□□□ 0.01
ALPK3-201ENST00000258888 SV2BQ7L1I2 683 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 RIOK3O14730 519 aaKnown RBP15.09■□□□□ 0.01
ALPK3-201ENST00000258888 POLR2DO15514 142 aaKnown RBP15.09■□□□□ 0.01
ALPK3-201ENST00000258888 ARMT1Q9H993 441 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 TTC31Q49AM3 519 aaPredicted RBP15.09■□□□□ 0.01
ALPK3-201ENST00000258888 SAMD15Q9P1V8 674 aa15.09■□□□□ 0.01
ALPK3-201ENST00000258888 ZNF594Q96JF6 807 aaPredicted RBP15.08■□□□□ 0.01
ALPK3-201ENST00000258888 MYL10Q9BUA6 226 aa15.08■□□□□ 0.01
ALPK3-201ENST00000258888 CDC37L1Q7L3B6 337 aa15.08■□□□□ 0.01
ALPK3-201ENST00000258888 GPIHBP1Q8IV16 184 aa15.08■□□□□ 0.01
ALPK3-201ENST00000258888 WDR62O43379 1518 aa15.08■□□□□ 0.01
ALPK3-201ENST00000258888 YTHDC2Q9H6S0 1430 aaKnown RBP15.08■□□□□ 0.01
ALPK3-201ENST00000258888 RIMBP2O15034 1052 aa15.08■□□□□ 0
ALPK3-201ENST00000258888 LEO1Q8WVC0 666 aaPredicted RBP15.08■□□□□ 0
ALPK3-201ENST00000258888 CHMP2AO43633 222 aa15.08■□□□□ 0
ALPK3-201ENST00000258888 TBC1D8BQ0IIM8 1120 aa15.08■□□□□ 0
ALPK3-201ENST00000258888 GPCPD1Q9NPB8 672 aa15.08■□□□□ 0
ALPK3-201ENST00000258888 SEL1L2Q5TEA6 688 aa15.08■□□□□ 0
ALPK3-201ENST00000258888 TRPM2O94759 1503 aa15.08■□□□□ 0
ALPK3-201ENST00000258888 EYA2O00167 538 aa15.08■□□□□ 0
ALPK3-201ENST00000258888 PRDM1O75626 825 aa15.08■□□□□ 0
ALPK3-201ENST00000258888 PCDH11XQ9BZA7 1347 aa15.08■□□□□ 0
ALPK3-201ENST00000258888 PCDH11YQ9BZA8 1340 aa15.08■□□□□ 0
ALPK3-201ENST00000258888 SGSM2O43147 1006 aa15.08■□□□□ 0
ALPK3-201ENST00000258888 SSX2IPQ9Y2D8 614 aa15.08■□□□□ 0
ALPK3-201ENST00000258888 DDX21Q9NR30 783 aaKnown RBP eCLIP15.07■□□□□ 0
ALPK3-201ENST00000258888 TPTE2Q6XPS3 522 aa15.07■□□□□ 0
ALPK3-201ENST00000258888 FRMD4BQ9Y2L6 1034 aa15.07■□□□□ 0
ALPK3-201ENST00000258888 KIAA0556O60303 1618 aa15.07■□□□□ 0
ALPK3-201ENST00000258888 ANKRD2Q9GZV1 360 aa15.07■□□□□ 0
ALPK3-201ENST00000258888 C10orf67Q8IYJ2 551 aa15.07■□□□□ 0
ALPK3-201ENST00000258888 C8orf37Q96NL8 207 aa15.07■□□□□ 0
ALPK3-201ENST00000258888 DEXIO95424 95 aa15.07■□□□□ 0
ALPK3-201ENST00000258888 GPAA1O43292 621 aa15.07■□□□□ 0
ALPK3-201ENST00000258888 WWC3Q9ULE0 1092 aa15.07■□□□□ 0
ALPK3-201ENST00000258888 ITGA6P23229 1130 aa15.07■□□□□ 0
ALPK3-201ENST00000258888 CALCOCO2Q13137 446 aa15.07■□□□□ 0
ALPK3-201ENST00000258888 PER1O15534 1290 aaPredicted RBP15.07■□□□□ 0
ALPK3-201ENST00000258888 RPL13P26373 211 aaKnown RBP15.07■□□□□ 0
ALPK3-201ENST00000258888 PHKBQ93100 1093 aa15.07■□□□□ 0
ALPK3-201ENST00000258888 PLCD1P51178 756 aa15.06■□□□□ 0
ALPK3-201ENST00000258888 METTL22Q9BUU2 404 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms