RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 USP8P40818 1118 aa14.04□□□□□ -0.16
USP30-201ENST00000257548 ESCO1Q5FWF5 840 aa14.04□□□□□ -0.16
USP30-201ENST00000257548 SRLQ86TD4 932 aa14.04□□□□□ -0.16
USP30-201ENST00000257548 ZNF594Q96JF6 807 aaPredicted RBP14.04□□□□□ -0.16
USP30-201ENST00000257548 ZKSCAN3Q9BRR0 538 aa14.04□□□□□ -0.16
USP30-201ENST00000257548 OSBPL5Q9H0X9 879 aaPredicted RBP14.04□□□□□ -0.16
USP30-201ENST00000257548 SAMM50Q9Y512 469 aa14.04□□□□□ -0.16
USP30-201ENST00000257548 IFIT3O14879 490 aaKnown RBP14.03□□□□□ -0.16
USP30-201ENST00000257548 ERCC3P19447 782 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 TNNI3KQ59H18 835 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 FOXR1Q6PIV2 292 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 VPS37DQ86XT2 251 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 ATRIPQ8WXE1 791 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 EXOC4Q96A65 974 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 SAMSN1Q9NSI8 373 aaKnown RBP14.03□□□□□ -0.16
USP30-201ENST00000257548 ZNHIT6Q9NWK9 470 aaKnown RBP14.03□□□□□ -0.16
USP30-201ENST00000257548 FPGT-TNNI3KV9GXZ4 949 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 A0A0G2JLW4 131 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 PFKFB2O60825 505 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 POLA2Q14181 598 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 SMYD4Q8IYR2 804 aaPredicted RBP14.03□□□□□ -0.16
USP30-201ENST00000257548 SLC35F6Q8N357 371 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 PHLPP2Q6ZVD8 1323 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 MAP2P11137 1827 aaKnown RBP14.03□□□□□ -0.16
USP30-201ENST00000257548 MACROD2A1Z1Q3 448 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 POTEB2H3BUK9 544 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 ERLIN2O94905 339 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 FMR1NBQ8N0W7 255 aaPredicted RBP14.03□□□□□ -0.16
USP30-201ENST00000257548 NCOA7Q8NI08 942 aa14.03□□□□□ -0.16
USP30-201ENST00000257548 RIN2Q8WYP3 895 aaPredicted RBP14.03□□□□□ -0.16
USP30-201ENST00000257548 CDKL5O76039 1030 aa14.02□□□□□ -0.16
USP30-201ENST00000257548 EIF4A1P60842 406 aaKnown RBP14.02□□□□□ -0.16
USP30-201ENST00000257548 CPSF1Q10570 1443 aaKnown RBP14.02□□□□□ -0.16
USP30-201ENST00000257548 NCAPH2Q6IBW4 605 aa14.02□□□□□ -0.16
USP30-201ENST00000257548 ANKRD13DQ6ZTN6 518 aa14.02□□□□□ -0.16
USP30-201ENST00000257548 hCG_1642624A0A1W2PR95 340 aa14.02□□□□□ -0.17
USP30-201ENST00000257548 CCDC57Q2TAC2 916 aa14.02□□□□□ -0.17
USP30-201ENST00000257548 TMEM67Q5HYA8 995 aa14.02□□□□□ -0.17
USP30-201ENST00000257548 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.17
USP30-201ENST00000257548 ACRBPQ8NEB7 543 aa14.02□□□□□ -0.17
USP30-201ENST00000257548 LLPHQ9BRT6 129 aaKnown RBP14.02□□□□□ -0.17
USP30-201ENST00000257548 KCNJ14Q9UNX9 436 aa14.02□□□□□ -0.17
USP30-201ENST00000257548 SLC12A7Q9Y666 1083 aa14.02□□□□□ -0.17
USP30-201ENST00000257548 CCDC151A5D8V7 595 aa14.02□□□□□ -0.17
USP30-201ENST00000257548 FOXN1O15353 648 aa14.02□□□□□ -0.17
USP30-201ENST00000257548 ALDH1L1O75891 902 aa14.02□□□□□ -0.17
USP30-201ENST00000257548 PARP3Q9Y6F1 533 aa14.02□□□□□ -0.17
USP30-201ENST00000257548 CASP8Q14790 479 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 TICAM2Q86XR7 235 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 GSPT2Q8IYD1 628 aaKnown RBP14.01□□□□□ -0.17
USP30-201ENST00000257548 BCAS4Q8TDM0 211 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 PLCD4Q9BRC7 762 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 L2HGDHQ9H9P8 463 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 MAP3K5Q99683 1374 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 ATP1A2P50993 1020 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 BRD3Q15059 726 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 SRGAP1Q7Z6B7 1085 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 OTUD6BQ8N6M0 293 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 FAM76AQ8TAV0 307 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 NAPGQ99747 312 aaPredicted RBP14.01□□□□□ -0.17
USP30-201ENST00000257548 H3BQF6 201 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 NDUFAB1O14561 156 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 RNF40O75150 1001 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 CASP1P29466 404 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 RNASE9P60153 205 aaKnown RBP14.01□□□□□ -0.17
USP30-201ENST00000257548 KRT40Q6A162 431 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 MAGEC2Q9UBF1 373 aaPredicted RBP14.01□□□□□ -0.17
USP30-201ENST00000257548 SERTAD1Q9UHV2 236 aa14.01□□□□□ -0.17
USP30-201ENST00000257548 GOLGA6CA6NDK9 693 aa14□□□□□ -0.17
USP30-201ENST00000257548 GOLGA6DP0CG33 693 aa14□□□□□ -0.17
USP30-201ENST00000257548 PIP4K2BP78356 416 aa14□□□□□ -0.17
USP30-201ENST00000257548 CCDC122Q5T0U0 273 aa14□□□□□ -0.17
USP30-201ENST00000257548 RRAGBQ5VZM2 374 aa14□□□□□ -0.17
USP30-201ENST00000257548 GOLGA6AQ9NYA3 693 aa14□□□□□ -0.17
USP30-201ENST00000257548 SETD1BQ9UPS6 1966 aaKnown RBP14□□□□□ -0.17
USP30-201ENST00000257548 YEATS4O95619 227 aa14□□□□□ -0.17
USP30-201ENST00000257548 KRT9P35527 623 aa14□□□□□ -0.17
USP30-201ENST00000257548 BRAPQ7Z569 592 aa14□□□□□ -0.17
USP30-201ENST00000257548 MYCBPQ99417 103 aaPredicted RBP14□□□□□ -0.17
USP30-201ENST00000257548 EFCC1Q9HA90 598 aa14□□□□□ -0.17
USP30-201ENST00000257548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14□□□□□ -0.17
USP30-201ENST00000257548 RIMBP3CA6NJZ7 1639 aa14□□□□□ -0.17
USP30-201ENST00000257548 RIMBP3BA6NNM3 1639 aa14□□□□□ -0.17
USP30-201ENST00000257548 RIMBP3Q9UFD9 1639 aa14□□□□□ -0.17
USP30-201ENST00000257548 MINDY4BA8MYZ0 360 aa14□□□□□ -0.17
USP30-201ENST00000257548 B4E1Z4 1266 aa14□□□□□ -0.17
USP30-201ENST00000257548 ZBTB43O43298 467 aa14□□□□□ -0.17
USP30-201ENST00000257548 MAP2K2P36507 400 aa14□□□□□ -0.17
USP30-201ENST00000257548 PLIN2Q99541 437 aa14□□□□□ -0.17
USP30-201ENST00000257548 RTEL1Q9NZ71 1219 aa14□□□□□ -0.17
USP30-201ENST00000257548 ADGRB2O60241 1585 aa14□□□□□ -0.17
USP30-201ENST00000257548 FLT4P35916 1363 aa13.99□□□□□ -0.17
USP30-201ENST00000257548 HSPD1P10809 573 aaKnown RBP13.99□□□□□ -0.17
USP30-201ENST00000257548 CASP14P31944 242 aa13.99□□□□□ -0.17
USP30-201ENST00000257548 INPP5BP32019 993 aa13.99□□□□□ -0.17
USP30-201ENST00000257548 STIM1Q13586 685 aa13.99□□□□□ -0.17
USP30-201ENST00000257548 KCTD16Q68DU8 428 aa13.99□□□□□ -0.17
USP30-201ENST00000257548 STOX1Q6ZVD7 989 aa13.99□□□□□ -0.17
USP30-201ENST00000257548 VSTM4Q8IW00 320 aa13.99□□□□□ -0.17
USP30-201ENST00000257548 KBTBD3Q8NAB2 608 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms