RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 RIOK3O14730 519 aaKnown RBP13.06□□□□□ -0.32
PDE6B-201ENST00000255622 KINO60870 393 aaKnown RBP13.06□□□□□ -0.32
PDE6B-201ENST00000255622 METTL24Q5JXM2 366 aa13.06□□□□□ -0.32
PDE6B-201ENST00000255622 KIF6Q6ZMV9 814 aa13.06□□□□□ -0.32
PDE6B-201ENST00000255622 MB21D2Q8IYB1 491 aaPredicted RBP13.06□□□□□ -0.32
PDE6B-201ENST00000255622 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.06□□□□□ -0.32
PDE6B-201ENST00000255622 ZNF396Q96N95 335 aaPredicted RBP13.06□□□□□ -0.32
PDE6B-201ENST00000255622 BRMS1Q9HCU9 246 aa13.06□□□□□ -0.32
PDE6B-201ENST00000255622 AKAP2Q9Y2D5 859 aa13.06□□□□□ -0.32
PDE6B-201ENST00000255622 SPEF2Q9C093 1822 aa13.06□□□□□ -0.32
PDE6B-201ENST00000255622 RXRAP19793 462 aa13.06□□□□□ -0.32
PDE6B-201ENST00000255622 POLD1P28340 1107 aa13.06□□□□□ -0.32
PDE6B-201ENST00000255622 FAM160A1Q05DH4 1040 aa13.06□□□□□ -0.32
PDE6B-201ENST00000255622 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
PDE6B-201ENST00000255622 NBPF3Q9H094 633 aa13.06□□□□□ -0.32
PDE6B-201ENST00000255622 KIF28PB7ZC32 967 aa13.05□□□□□ -0.32
PDE6B-201ENST00000255622 GOLGA6L19H0YKK7 550 aa13.05□□□□□ -0.32
PDE6B-201ENST00000255622 PCCAP05165 728 aaPredicted RBP13.05□□□□□ -0.32
PDE6B-201ENST00000255622 ITGA6P23229 1130 aa13.05□□□□□ -0.32
PDE6B-201ENST00000255622 NDUFA8P51970 172 aa13.05□□□□□ -0.32
PDE6B-201ENST00000255622 STX1AQ16623 288 aa13.05□□□□□ -0.32
PDE6B-201ENST00000255622 DHX40Q8IX18 779 aaKnown RBP13.05□□□□□ -0.32
PDE6B-201ENST00000255622 ZBTB38Q8NAP3 1195 aaPredicted RBP13.05□□□□□ -0.32
PDE6B-201ENST00000255622 APPBP2Q92624 585 aa13.05□□□□□ -0.32
PDE6B-201ENST00000255622 H0YHG0 523 aa13.05□□□□□ -0.32
PDE6B-201ENST00000255622 SARNPP82979 210 aaKnown RBP13.05□□□□□ -0.32
PDE6B-201ENST00000255622 LDHAL6AQ6ZMR3 332 aa13.05□□□□□ -0.32
PDE6B-201ENST00000255622 C8orf76Q96K31 380 aa13.05□□□□□ -0.32
PDE6B-201ENST00000255622 AIFM3Q96NN9 605 aa13.05□□□□□ -0.32
PDE6B-201ENST00000255622 RBM28Q9NW13 759 aaKnown RBP13.05□□□□□ -0.32
PDE6B-201ENST00000255622 CSF1RP07333 972 aa13.05□□□□□ -0.32
PDE6B-201ENST00000255622 GOLGA6L1Q8N7Z2 621 aa13.05□□□□□ -0.32
PDE6B-201ENST00000255622 ORC3Q9UBD5 711 aaPredicted RBP13.05□□□□□ -0.32
PDE6B-201ENST00000255622 CTNNA3Q9UI47 895 aa13.05□□□□□ -0.32
PDE6B-201ENST00000255622 ZNF213O14771 459 aa13.04□□□□□ -0.32
PDE6B-201ENST00000255622 EVCP57679 992 aa13.04□□□□□ -0.32
PDE6B-201ENST00000255622 SENP2Q9HC62 589 aa13.04□□□□□ -0.32
PDE6B-201ENST00000255622 RIPOR2Q9Y4F9 1068 aa13.04□□□□□ -0.32
PDE6B-201ENST00000255622 MYO5AQ9Y4I1 1855 aaKnown RBP13.04□□□□□ -0.32
PDE6B-201ENST00000255622 SLC9C2Q5TAH2 1124 aa13.04□□□□□ -0.32
PDE6B-201ENST00000255622 RALYLQ86SE5 291 aaKnown RBP13.04□□□□□ -0.32
PDE6B-201ENST00000255622 TBC1D10CQ8IV04 446 aa13.04□□□□□ -0.32
PDE6B-201ENST00000255622 FMR1NBQ8N0W7 255 aaPredicted RBP13.04□□□□□ -0.32
PDE6B-201ENST00000255622 TTLL11Q8NHH1 800 aa13.04□□□□□ -0.32
PDE6B-201ENST00000255622 PIH1D3Q9NQM4 214 aaKnown RBP13.04□□□□□ -0.32
PDE6B-201ENST00000255622 INCENPQ9NQS7 918 aa13.04□□□□□ -0.32
PDE6B-201ENST00000255622 KAT6BQ8WYB5 2073 aa13.04□□□□□ -0.32
PDE6B-201ENST00000255622 IDH1O75874 414 aaKnown RBP13.03□□□□□ -0.32
PDE6B-201ENST00000255622 KRT222Q8N1A0 295 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 AOPEPQ8N6M6 819 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 LINC00301Q8NCQ3 95 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 MNS1Q8NEH6 495 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 NCOA7Q8NI08 942 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 MRPS27Q92552 414 aaKnown RBP13.03□□□□□ -0.32
PDE6B-201ENST00000255622 CNNM1Q9NRU3 951 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 BECN2A8MW95 431 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 CPLX1O14810 134 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 ZFYP08048 801 aaPredicted RBP13.03□□□□□ -0.32
PDE6B-201ENST00000255622 SYT10Q6XYQ8 523 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.03□□□□□ -0.32
PDE6B-201ENST00000255622 NLRP10Q86W26 655 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 HELBQ8NG08 1087 aaPredicted RBP13.03□□□□□ -0.32
PDE6B-201ENST00000255622 SLC4A9Q96Q91 983 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 ST7Q9NRC1 585 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 RTEL1Q9NZ71 1219 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 SLAIN2Q9P270 581 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 SOS2Q07890 1332 aaPredicted RBP13.03□□□□□ -0.32
PDE6B-201ENST00000255622 SNAP23O00161 211 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 STK38Q15208 465 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 SF3A1Q15459 793 aaKnown RBP13.03□□□□□ -0.32
PDE6B-201ENST00000255622 CYB5R4Q7L1T6 521 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 CCDC91Q7Z6B0 441 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 FBXO18Q8NFZ0 1043 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 SDF4Q9BRK5 362 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 MAP3K15Q6ZN16 1313 aa13.03□□□□□ -0.32
PDE6B-201ENST00000255622 BIN1O00499 593 aa13.02□□□□□ -0.32
PDE6B-201ENST00000255622 CTAGE5O15320 804 aa13.02□□□□□ -0.32
PDE6B-201ENST00000255622 CALRP27797 417 aaKnown RBP13.02□□□□□ -0.32
PDE6B-201ENST00000255622 TRIM28Q13263 835 aaKnown RBP13.02□□□□□ -0.32
PDE6B-201ENST00000255622 FILIP1Q7Z7B0 1213 aa13.02□□□□□ -0.32
PDE6B-201ENST00000255622 FBXL16Q8N461 479 aa13.02□□□□□ -0.32
PDE6B-201ENST00000255622 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.02□□□□□ -0.33
PDE6B-201ENST00000255622 AKAP11Q9UKA4 1901 aa13.02□□□□□ -0.33
PDE6B-201ENST00000255622 CCDC189A1A4V9 331 aa13.02□□□□□ -0.33
PDE6B-201ENST00000255622 USP27XA6NNY8 438 aa13.02□□□□□ -0.33
PDE6B-201ENST00000255622 UBE2Q2LH0YL09 131 aa13.02□□□□□ -0.33
PDE6B-201ENST00000255622 MYO1CO00159 1063 aa13.02□□□□□ -0.33
PDE6B-201ENST00000255622 PHKA1P46020 1223 aa13.02□□□□□ -0.33
PDE6B-201ENST00000255622 LRRFIP1Q32MZ4 808 aaKnown RBP13.02□□□□□ -0.33
PDE6B-201ENST00000255622 DPCR1Q3MIW9 517 aa13.02□□□□□ -0.33
PDE6B-201ENST00000255622 GIGYF2Q6Y7W6 1299 aaKnown RBP13.02□□□□□ -0.33
PDE6B-201ENST00000255622 PLA2G12BQ9BX93 195 aa13.02□□□□□ -0.33
PDE6B-201ENST00000255622 MYH7P12883 1935 aa13.02□□□□□ -0.33
PDE6B-201ENST00000255622 KIF1CO43896 1103 aaKnown RBP13.01□□□□□ -0.33
PDE6B-201ENST00000255622 CTSWP56202 376 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 MYSM1Q5VVJ2 828 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 ADALQ6DHV7 355 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 TTC19Q6DKK2 380 aaPredicted RBP13.01□□□□□ -0.33
PDE6B-201ENST00000255622 PHKBQ93100 1093 aa13.01□□□□□ -0.33
PDE6B-201ENST00000255622 WWC3Q9ULE0 1092 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms