RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 DRC1Q96MC2 740 aa23.41■■□□□ 1.34
RARA-201ENST00000254066 VIPAS39Q9H9C1 493 aa23.41■■□□□ 1.34
RARA-201ENST00000254066 OLFM4Q6UX06 510 aa23.41■■□□□ 1.34
RARA-201ENST00000254066 TADA2BQ86TJ2 420 aa23.41■■□□□ 1.34
RARA-201ENST00000254066 COL15A1P39059 1388 aa23.41■■□□□ 1.34
RARA-201ENST00000254066 UTYO14607 1347 aa23.4■■□□□ 1.34
RARA-201ENST00000254066 FOXR1Q6PIV2 292 aa23.4■■□□□ 1.34
RARA-201ENST00000254066 FBXL16Q8N461 479 aa23.4■■□□□ 1.34
RARA-201ENST00000254066 TC2NQ8N9U0 490 aa23.4■■□□□ 1.34
RARA-201ENST00000254066 CHPF2Q9P2E5 772 aa23.4■■□□□ 1.34
RARA-201ENST00000254066 CCDC175P0C221 793 aa23.4■■□□□ 1.34
RARA-201ENST00000254066 PFKFB1P16118 471 aa23.4■■□□□ 1.34
RARA-201ENST00000254066 EIF4A1P60842 406 aaKnown RBP23.4■■□□□ 1.34
RARA-201ENST00000254066 CLIC4Q9Y696 253 aa23.4■■□□□ 1.34
RARA-201ENST00000254066 ATP5JP18859 108 aa23.39■■□□□ 1.34
RARA-201ENST00000254066 CASP8Q14790 479 aa23.39■■□□□ 1.34
RARA-201ENST00000254066 MCMDC2Q4G0Z9 681 aa23.39■■□□□ 1.34
RARA-201ENST00000254066 SPECC1LQ69YQ0 1117 aa23.39■■□□□ 1.34
RARA-201ENST00000254066 RPAINQ86UA6 219 aa23.39■■□□□ 1.34
RARA-201ENST00000254066 CNNM3Q8NE01 707 aa23.39■■□□□ 1.34
RARA-201ENST00000254066 ABCB6Q9NP58 842 aa23.39■■□□□ 1.34
RARA-201ENST00000254066 LAMA4Q16363 1823 aa23.39■■□□□ 1.33
RARA-201ENST00000254066 CEMIPQ8WUJ3 1361 aa23.39■■□□□ 1.33
RARA-201ENST00000254066 NBPF6Q5VWK0 638 aa23.39■■□□□ 1.33
RARA-201ENST00000254066 TOGARAM2Q6ZUX3 1019 aa23.39■■□□□ 1.33
RARA-201ENST00000254066 CTCFLQ8NI51 663 aaPredicted RBP23.39■■□□□ 1.33
RARA-201ENST00000254066 NBPF4Q96M43 638 aa23.39■■□□□ 1.33
RARA-201ENST00000254066 FAM237AA0A1B0GTK4 181 aa23.38■■□□□ 1.33
RARA-201ENST00000254066 NAA15Q9BXJ9 866 aaKnown RBP23.38■■□□□ 1.33
RARA-201ENST00000254066 TMEM232C9JQI7 657 aa23.38■■□□□ 1.33
RARA-201ENST00000254066 WDHD1O75717 1129 aaPredicted RBP23.38■■□□□ 1.33
RARA-201ENST00000254066 FOSBP53539 338 aa23.38■■□□□ 1.33
RARA-201ENST00000254066 MYSM1Q5VVJ2 828 aa23.38■■□□□ 1.33
RARA-201ENST00000254066 ARHGEF25Q86VW2 580 aa23.38■■□□□ 1.33
RARA-201ENST00000254066 ELOA2Q8IYF1 753 aaPredicted RBP23.38■■□□□ 1.33
RARA-201ENST00000254066 EIF2S2P20042 333 aaKnown RBP23.37■■□□□ 1.33
RARA-201ENST00000254066 PDIA3P30101 505 aaKnown RBP23.37■■□□□ 1.33
RARA-201ENST00000254066 AARSP49588 968 aaKnown RBP eCLIP23.37■■□□□ 1.33
RARA-201ENST00000254066 MEX3CQ5U5Q3 659 aaKnown RBP23.37■■□□□ 1.33
RARA-201ENST00000254066 BANK1Q8NDB2 785 aa23.37■■□□□ 1.33
RARA-201ENST00000254066 INTS13Q9NVM9 706 aa23.37■■□□□ 1.33
RARA-201ENST00000254066 TLR7Q9NYK1 1049 aaKnown RBP23.37■■□□□ 1.33
RARA-201ENST00000254066 LRP6O75581 1613 aa23.37■■□□□ 1.33
RARA-201ENST00000254066 SYNE3Q6ZMZ3 975 aa23.37■■□□□ 1.33
RARA-201ENST00000254066 PANX2Q96RD6 677 aa23.37■■□□□ 1.33
RARA-201ENST00000254066 PNKPQ96T60 521 aa23.37■■□□□ 1.33
RARA-201ENST00000254066 HPSEQ9Y251 543 aa23.37■■□□□ 1.33
RARA-201ENST00000254066 SOS2Q07890 1332 aaPredicted RBP23.36■■□□□ 1.33
RARA-201ENST00000254066 KDM3BQ7LBC6 1761 aa23.36■■□□□ 1.33
RARA-201ENST00000254066 KIF5CO60282 957 aa23.36■■□□□ 1.33
RARA-201ENST00000254066 N4BP1O75113 896 aaKnown RBP23.36■■□□□ 1.33
RARA-201ENST00000254066 ZNF609O15014 1411 aa23.36■■□□□ 1.33
RARA-201ENST00000254066 SYKP43405 635 aa23.35■■□□□ 1.33
RARA-201ENST00000254066 AMPHP49418 695 aa23.35■■□□□ 1.33
RARA-201ENST00000254066 ANO1Q5XXA6 986 aa23.35■■□□□ 1.33
RARA-201ENST00000254066 WDR93Q6P2C0 686 aa23.35■■□□□ 1.33
RARA-201ENST00000254066 STOX1Q6ZVD7 989 aa23.35■■□□□ 1.33
RARA-201ENST00000254066 FANCLQ9NW38 375 aa23.35■■□□□ 1.33
RARA-201ENST00000254066 FDPSP14324 419 aaKnown RBP23.35■■□□□ 1.33
RARA-201ENST00000254066 USP8P40818 1118 aa23.35■■□□□ 1.33
RARA-201ENST00000254066 GUCY1B3Q02153 619 aa23.35■■□□□ 1.33
RARA-201ENST00000254066 WHAMMP3Q1A5X7 153 aa23.35■■□□□ 1.33
RARA-201ENST00000254066 ANKRD24Q8TF21 1146 aa23.35■■□□□ 1.33
RARA-201ENST00000254066 CCDC102AQ96A19 550 aa23.35■■□□□ 1.33
RARA-201ENST00000254066 ORAI2Q96SN7 254 aa23.35■■□□□ 1.33
RARA-201ENST00000254066 LRRC2Q9BYS8 371 aa23.35■■□□□ 1.33
RARA-201ENST00000254066 DBF4Q9UBU7 674 aaPredicted RBP23.35■■□□□ 1.33
RARA-201ENST00000254066 CCT2P78371 535 aaKnown RBP23.34■■□□□ 1.33
RARA-201ENST00000254066 DSCC1Q9BVC3 393 aa23.34■■□□□ 1.33
RARA-201ENST00000254066 TOMM22Q9NS69 142 aa23.34■■□□□ 1.33
RARA-201ENST00000254066 SH3TC1Q8TE82 1336 aa23.34■■□□□ 1.33
RARA-201ENST00000254066 GOLGA8FQ08AF8 430 aa23.34■■□□□ 1.33
RARA-201ENST00000254066 GOLGA8DPQ0D2H9 430 aa23.34■■□□□ 1.33
RARA-201ENST00000254066 SLC39A14Q15043 492 aa23.34■■□□□ 1.33
RARA-201ENST00000254066 ZNF772Q68DY9 489 aaPredicted RBP23.34■■□□□ 1.33
RARA-201ENST00000254066 KSR2Q6VAB6 950 aa23.34■■□□□ 1.33
RARA-201ENST00000254066 PPP6R2O75170 966 aa23.33■■□□□ 1.33
RARA-201ENST00000254066 HSP90AB3PQ58FF7 597 aa23.33■■□□□ 1.33
RARA-201ENST00000254066 JMYQ8N9B5 988 aa23.33■■□□□ 1.33
RARA-201ENST00000254066 AFAP1L1Q8TED9 768 aa23.33■■□□□ 1.33
RARA-201ENST00000254066 C8orf76Q96K31 380 aa23.33■■□□□ 1.33
RARA-201ENST00000254066 SEC62Q99442 399 aaKnown RBP23.33■■□□□ 1.33
RARA-201ENST00000254066 FAM204AQ9H8W3 233 aa23.33■■□□□ 1.33
RARA-201ENST00000254066 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.33■■□□□ 1.33
RARA-201ENST00000254066 MCM3P25205 808 aa23.33■■□□□ 1.33
RARA-201ENST00000254066 ANKARQ7Z5J8 1434 aa23.33■■□□□ 1.33
RARA-201ENST00000254066 PDILTQ8N807 584 aa23.33■■□□□ 1.33
RARA-201ENST00000254066 BICC1Q9H694 974 aaKnown RBP23.33■■□□□ 1.33
RARA-201ENST00000254066 GRM8O00222 908 aa23.32■■□□□ 1.32
RARA-201ENST00000254066 ESCO1Q5FWF5 840 aa23.32■■□□□ 1.32
RARA-201ENST00000254066 LINS1Q8NG48 757 aa23.32■■□□□ 1.32
RARA-201ENST00000254066 MRPL44Q9H9J2 332 aaKnown RBP23.32■■□□□ 1.32
RARA-201ENST00000254066 MAP3K2Q9Y2U5 619 aa23.32■■□□□ 1.32
RARA-201ENST00000254066 CTAGE9A4FU28 777 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 PRR29P0C7W0 189 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 CCDC172P0C7W6 258 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 KARSQ15046 597 aaKnown RBP23.31■■□□□ 1.32
RARA-201ENST00000254066 POTEAQ6S8J7 498 aa23.31■■□□□ 1.32
RARA-201ENST00000254066 NCOA5Q9HCD5 579 aaKnown RBP23.31■■□□□ 1.32
RARA-201ENST00000254066 PUF60Q9UHX1 559 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms