RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 RBM5P52756 815 aaKnown RBP eCLIP13.77□□□□□ -0.21
TREM1-201ENST00000244709 PPP4CP60510 307 aa13.77□□□□□ -0.21
TREM1-201ENST00000244709 HDLBPQ00341 1268 aaKnown RBP13.77□□□□□ -0.21
TREM1-201ENST00000244709 CFAP100Q494V2 611 aa13.77□□□□□ -0.21
TREM1-201ENST00000244709 ZDHHC15Q96MV8 337 aa13.77□□□□□ -0.21
TREM1-201ENST00000244709 FOXP2O15409 715 aa13.76□□□□□ -0.21
TREM1-201ENST00000244709 PRKAB2O43741 272 aa13.76□□□□□ -0.21
TREM1-201ENST00000244709 BAG3O95817 575 aa13.76□□□□□ -0.21
TREM1-201ENST00000244709 APOBEC3HQ6NTF7 200 aaKnown RBP13.76□□□□□ -0.21
TREM1-201ENST00000244709 OGFOD1Q8N543 542 aa13.76□□□□□ -0.21
TREM1-201ENST00000244709 SH3RF3Q8TEJ3 882 aaPredicted RBP13.76□□□□□ -0.21
TREM1-201ENST00000244709 DPF2Q92785 391 aa13.76□□□□□ -0.21
TREM1-201ENST00000244709 USP26Q9BXU7 913 aa13.76□□□□□ -0.21
TREM1-201ENST00000244709 SLC4A4Q9Y6R1 1079 aa13.76□□□□□ -0.21
TREM1-201ENST00000244709 ZC3H4Q9UPT8 1303 aaKnown RBP13.76□□□□□ -0.21
TREM1-201ENST00000244709 DCAF8L1A6NGE4 600 aa13.75□□□□□ -0.21
TREM1-201ENST00000244709 DDNO94850 711 aaPredicted RBP13.75□□□□□ -0.21
TREM1-201ENST00000244709 MICALL2Q8IY33 904 aa13.75□□□□□ -0.21
TREM1-201ENST00000244709 SDR42E1Q8WUS8 393 aa13.75□□□□□ -0.21
TREM1-201ENST00000244709 DSCC1Q9BVC3 393 aa13.75□□□□□ -0.21
TREM1-201ENST00000244709 GNAT2P19087 354 aa13.75□□□□□ -0.21
TREM1-201ENST00000244709 RHBDL3P58872 404 aa13.75□□□□□ -0.21
TREM1-201ENST00000244709 ZNF280AP59817 542 aaPredicted RBP13.75□□□□□ -0.21
TREM1-201ENST00000244709 MAP4K1Q92918 833 aa13.75□□□□□ -0.21
TREM1-201ENST00000244709 CRNKL1Q9BZJ0 848 aaKnown RBP13.75□□□□□ -0.21
TREM1-201ENST00000244709 EPB41L4AQ9HCS5 686 aaPredicted RBP13.75□□□□□ -0.21
TREM1-201ENST00000244709 MYOZ2Q9NPC6 264 aa13.75□□□□□ -0.21
TREM1-201ENST00000244709 CNOT7Q9UIV1 285 aaKnown RBP13.75□□□□□ -0.21
TREM1-201ENST00000244709 LAMA4Q16363 1823 aa13.75□□□□□ -0.21
TREM1-201ENST00000244709 DDX60LQ5H9U9 1706 aaKnown RBP13.74□□□□□ -0.21
TREM1-201ENST00000244709 MYH1P12882 1939 aa13.74□□□□□ -0.21
TREM1-201ENST00000244709 LAMB1P07942 1786 aa13.74□□□□□ -0.21
TREM1-201ENST00000244709 GSG1L2A8MUP6 293 aa13.74□□□□□ -0.21
TREM1-201ENST00000244709 PATL2C9JE40 543 aaKnown RBP13.74□□□□□ -0.21
TREM1-201ENST00000244709 APPP05067 770 aa13.74□□□□□ -0.21
TREM1-201ENST00000244709 PLCG2P16885 1265 aa13.74□□□□□ -0.21
TREM1-201ENST00000244709 CDC42EP5Q6NZY7 148 aa13.74□□□□□ -0.21
TREM1-201ENST00000244709 CERS3Q8IU89 383 aa13.74□□□□□ -0.21
TREM1-201ENST00000244709 TEX11Q8IYF3 940 aa13.74□□□□□ -0.21
TREM1-201ENST00000244709 UPF2Q9HAU5 1272 aaKnown RBP13.74□□□□□ -0.21
TREM1-201ENST00000244709 RBM8AQ9Y5S9 174 aaKnown RBP13.74□□□□□ -0.21
TREM1-201ENST00000244709 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
TREM1-201ENST00000244709 EPB41L2O43491 1005 aaKnown RBP13.73□□□□□ -0.21
TREM1-201ENST00000244709 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
TREM1-201ENST00000244709 DLGAP5Q15398 846 aa13.73□□□□□ -0.21
TREM1-201ENST00000244709 IFNL3Q8IZI9 196 aa13.73□□□□□ -0.21
TREM1-201ENST00000244709 MTMR14Q8NCE2 650 aa13.73□□□□□ -0.21
TREM1-201ENST00000244709 PRMT6Q96LA8 375 aaPredicted RBP13.73□□□□□ -0.21
TREM1-201ENST00000244709 USP40Q9NVE5 1235 aa13.73□□□□□ -0.21
TREM1-201ENST00000244709 GPRC5DQ9NZD1 345 aa13.73□□□□□ -0.21
TREM1-201ENST00000244709 EGFRP00533 1210 aa13.72□□□□□ -0.21
TREM1-201ENST00000244709 MMP14P50281 582 aa13.72□□□□□ -0.21
TREM1-201ENST00000244709 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
TREM1-201ENST00000244709 DPY19L2Q6NUT2 758 aa13.72□□□□□ -0.21
TREM1-201ENST00000244709 SAMD7Q7Z3H4 446 aa13.72□□□□□ -0.21
TREM1-201ENST00000244709 TGFBRAP1Q8WUH2 860 aa13.72□□□□□ -0.21
TREM1-201ENST00000244709 ZBED3Q96IU2 234 aaPredicted RBP13.72□□□□□ -0.21
TREM1-201ENST00000244709 C22orf23Q9BZE7 217 aa13.72□□□□□ -0.21
TREM1-201ENST00000244709 U3KPZ7 1027 aaPredicted RBP13.72□□□□□ -0.21
TREM1-201ENST00000244709 RPAP1Q9BWH6 1393 aaPredicted RBP13.72□□□□□ -0.21
TREM1-201ENST00000244709 GLTPD2A6NH11 291 aa13.72□□□□□ -0.21
TREM1-201ENST00000244709 FGAP02671 866 aa13.72□□□□□ -0.21
TREM1-201ENST00000244709 EPS15P42566 896 aa13.72□□□□□ -0.21
TREM1-201ENST00000244709 USP5P45974 858 aa13.72□□□□□ -0.21
TREM1-201ENST00000244709 CACNB3P54284 484 aa13.72□□□□□ -0.21
TREM1-201ENST00000244709 TBC1D10BQ4KMP7 808 aaPredicted RBP13.72□□□□□ -0.21
TREM1-201ENST00000244709 MAPKAPK5Q8IW41 473 aa13.72□□□□□ -0.21
TREM1-201ENST00000244709 TDRD3Q9H7E2 651 aaKnown RBP13.72□□□□□ -0.21
TREM1-201ENST00000244709 DCP1AQ9NPI6 582 aaPredicted RBP13.72□□□□□ -0.21
TREM1-201ENST00000244709 ZMYM6O95789 1325 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 FLT1P17948 1338 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 WDR90Q96KV7 1748 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 SCN4AP35499 1836 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 H7C1D1 291 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 WNT10BO00744 389 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 WDHD1O75717 1129 aaPredicted RBP13.71□□□□□ -0.21
TREM1-201ENST00000244709 MCCP23508 829 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 HSPA4P34932 840 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 TDO2P48775 406 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 PICALMQ13492 652 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 NECTIN1Q15223 517 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 ALX1Q15699 326 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 KIF4BQ2VIQ3 1234 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 NBPF9Q3BBW0 867 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 TBC1D32Q96NH3 1257 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 NACAP1Q9BZK3 213 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 NAPBQ9H115 298 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 DDX4Q9NQI0 724 aaKnown RBP13.71□□□□□ -0.21
TREM1-201ENST00000244709 ATP8A2Q9NTI2 1148 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 PALD1Q9ULE6 856 aa13.71□□□□□ -0.21
TREM1-201ENST00000244709 CLRN2A0PK11 232 aa13.7□□□□□ -0.22
TREM1-201ENST00000244709 LMOD1P29536 600 aaPredicted RBP13.7□□□□□ -0.22
TREM1-201ENST00000244709 NFIAQ12857 509 aa13.7□□□□□ -0.22
TREM1-201ENST00000244709 CREB3L3Q68CJ9 461 aa13.7□□□□□ -0.22
TREM1-201ENST00000244709 GIMAP6Q6P9H5 292 aa13.7□□□□□ -0.22
TREM1-201ENST00000244709 TRPM4Q8TD43 1214 aa13.7□□□□□ -0.22
TREM1-201ENST00000244709 L3MBTL3Q96JM7 780 aaPredicted RBP13.7□□□□□ -0.22
TREM1-201ENST00000244709 MKRN1Q9UHC7 482 aaKnown RBP13.7□□□□□ -0.22
TREM1-201ENST00000244709 SLC27A2O14975 620 aa13.69□□□□□ -0.22
TREM1-201ENST00000244709 RBM25P49756 843 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms