RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 GRIN1Q05586 938 aa21.42■■□□□ 1.02
CHPF-201ENST00000243776 KARSQ15046 597 aaKnown RBP21.42■■□□□ 1.02
CHPF-201ENST00000243776 TEX35Q5T0J7 233 aa21.42■■□□□ 1.02
CHPF-201ENST00000243776 TMCO3Q6UWJ1 677 aa21.42■■□□□ 1.02
CHPF-201ENST00000243776 CMTR1Q8N1G2 835 aaKnown RBP21.42■■□□□ 1.02
CHPF-201ENST00000243776 METTL16Q86W50 562 aaKnown RBP21.42■■□□□ 1.02
CHPF-201ENST00000243776 TBC1D10CQ8IV04 446 aa21.42■■□□□ 1.02
CHPF-201ENST00000243776 REXO1L1PQ8IX06 675 aa21.42■■□□□ 1.02
CHPF-201ENST00000243776 CNNM3Q8NE01 707 aa21.42■■□□□ 1.02
CHPF-201ENST00000243776 IDH1O75874 414 aaKnown RBP21.42■■□□□ 1.02
CHPF-201ENST00000243776 GYS2P54840 703 aa21.42■■□□□ 1.02
CHPF-201ENST00000243776 EVCP57679 992 aa21.42■■□□□ 1.02
CHPF-201ENST00000243776 CDK11BP21127 795 aaKnown RBP21.41■■□□□ 1.02
CHPF-201ENST00000243776 BMP6P22004 513 aa21.41■■□□□ 1.02
CHPF-201ENST00000243776 IRX2Q9BZI1 471 aaPredicted RBP21.41■■□□□ 1.02
CHPF-201ENST00000243776 OVOS2A0A0G2JMS6 1433 aa21.41■■□□□ 1.02
CHPF-201ENST00000243776 TRDNQ13061 729 aa21.41■■□□□ 1.02
CHPF-201ENST00000243776 OLFM4Q6UX06 510 aa21.41■■□□□ 1.02
CHPF-201ENST00000243776 TOGARAM2Q6ZUX3 1019 aa21.41■■□□□ 1.02
CHPF-201ENST00000243776 NEK11Q8NG66 645 aa21.41■■□□□ 1.02
CHPF-201ENST00000243776 NBPF3Q9H094 633 aa21.41■■□□□ 1.02
CHPF-201ENST00000243776 KCND1Q9NSA2 647 aa21.41■■□□□ 1.02
CHPF-201ENST00000243776 INTS13Q9NVM9 706 aa21.41■■□□□ 1.02
CHPF-201ENST00000243776 PPP2R2CQ9Y2T4 447 aa21.4■■□□□ 1.02
CHPF-201ENST00000243776 SLC9C2Q5TAH2 1124 aa21.39■■□□□ 1.02
CHPF-201ENST00000243776 VWA3AA6NCI4 1184 aa21.39■■□□□ 1.01
CHPF-201ENST00000243776 VSTM4Q8IW00 320 aa21.39■■□□□ 1.01
CHPF-201ENST00000243776 CPLX3Q8WVH0 158 aa21.39■■□□□ 1.01
CHPF-201ENST00000243776 SLC26A6Q9BXS9 759 aa21.39■■□□□ 1.01
CHPF-201ENST00000243776 KCNJ14Q9UNX9 436 aa21.39■■□□□ 1.01
CHPF-201ENST00000243776 PARP3Q9Y6F1 533 aa21.39■■□□□ 1.01
CHPF-201ENST00000243776 ABCC6O95255 1503 aa21.39■■□□□ 1.01
CHPF-201ENST00000243776 MTF1Q14872 753 aa21.39■■□□□ 1.01
CHPF-201ENST00000243776 KCNH3Q9ULD8 1083 aa21.39■■□□□ 1.01
CHPF-201ENST00000243776 IKBKBO14920 756 aa21.38■■□□□ 1.01
CHPF-201ENST00000243776 PRR29P0C7W0 189 aa21.38■■□□□ 1.01
CHPF-201ENST00000243776 APPBP2Q92624 585 aa21.38■■□□□ 1.01
CHPF-201ENST00000243776 ZKSCAN3Q9BRR0 538 aa21.38■■□□□ 1.01
CHPF-201ENST00000243776 A0A0U1RQJ8 604 aa21.38■■□□□ 1.01
CHPF-201ENST00000243776 FMR1Q06787 632 aaKnown RBP eCLIP21.38■■□□□ 1.01
CHPF-201ENST00000243776 PTPAQ15257 358 aa21.38■■□□□ 1.01
CHPF-201ENST00000243776 PROSER2Q86WR7 435 aaPredicted RBP21.38■■□□□ 1.01
CHPF-201ENST00000243776 ATRIPQ8WXE1 791 aa21.38■■□□□ 1.01
CHPF-201ENST00000243776 TOMM22Q9NS69 142 aa21.38■■□□□ 1.01
CHPF-201ENST00000243776 COBLO75128 1261 aa21.37■■□□□ 1.01
CHPF-201ENST00000243776 TADA3O75528 432 aa21.37■■□□□ 1.01
CHPF-201ENST00000243776 GPTP24298 496 aa21.37■■□□□ 1.01
CHPF-201ENST00000243776 GUCY1A2P33402 732 aa21.37■■□□□ 1.01
CHPF-201ENST00000243776 ST5P78524 1137 aa21.37■■□□□ 1.01
CHPF-201ENST00000243776 RRP12Q5JTH9 1297 aaKnown RBP21.37■■□□□ 1.01
CHPF-201ENST00000243776 GPR108Q9NPR9 543 aa21.37■■□□□ 1.01
CHPF-201ENST00000243776 TUBE1Q9UJT0 475 aa21.37■■□□□ 1.01
CHPF-201ENST00000243776 ANGEL1Q9UNK9 670 aaKnown RBP21.37■■□□□ 1.01
CHPF-201ENST00000243776 SASH3O75995 380 aa21.37■■□□□ 1.01
CHPF-201ENST00000243776 CCDC102BQ68D86 513 aa21.37■■□□□ 1.01
CHPF-201ENST00000243776 USP54Q70EL1 1684 aa21.37■■□□□ 1.01
CHPF-201ENST00000243776 SIPA1L3O60292 1781 aaPredicted RBP21.37■■□□□ 1.01
CHPF-201ENST00000243776 VGLL3A8MV65 326 aa21.37■■□□□ 1.01
CHPF-201ENST00000243776 RANBP6O60518 1105 aaKnown RBP21.37■■□□□ 1.01
CHPF-201ENST00000243776 TRHP20396 242 aaPredicted RBP21.37■■□□□ 1.01
CHPF-201ENST00000243776 MCAMP43121 646 aa21.37■■□□□ 1.01
CHPF-201ENST00000243776 BAG1Q99933 345 aaPredicted RBP21.37■■□□□ 1.01
CHPF-201ENST00000243776 CCDC66A2RUB6 948 aa21.36■■□□□ 1.01
CHPF-201ENST00000243776 BTBD18B2RXH4 712 aa21.36■■□□□ 1.01
CHPF-201ENST00000243776 CASQ1P31415 396 aa21.36■■□□□ 1.01
CHPF-201ENST00000243776 ARGLU1Q9NWB6 273 aaPredicted RBP21.36■■□□□ 1.01
CHPF-201ENST00000243776 CBFA2T2O43439 604 aa21.36■■□□□ 1.01
CHPF-201ENST00000243776 IARSP41252 1262 aaKnown RBP21.36■■□□□ 1.01
CHPF-201ENST00000243776 HNRNPH2P55795 449 aaKnown RBP21.36■■□□□ 1.01
CHPF-201ENST00000243776 CTDSPL2Q05D32 466 aa21.36■■□□□ 1.01
CHPF-201ENST00000243776 APOA5Q6Q788 366 aa21.36■■□□□ 1.01
CHPF-201ENST00000243776 HELBQ8NG08 1087 aaPredicted RBP21.36■■□□□ 1.01
CHPF-201ENST00000243776 SAMSN1Q9NSI8 373 aaKnown RBP21.36■■□□□ 1.01
CHPF-201ENST00000243776 NFE2L3Q9Y4A8 694 aa21.36■■□□□ 1.01
CHPF-201ENST00000243776 POLR2DO15514 142 aaKnown RBP21.35■■□□□ 1.01
CHPF-201ENST00000243776 CASP1P29466 404 aa21.35■■□□□ 1.01
CHPF-201ENST00000243776 TRIM29Q14134 588 aa21.35■■□□□ 1.01
CHPF-201ENST00000243776 METTL24Q5JXM2 366 aa21.35■■□□□ 1.01
CHPF-201ENST00000243776 KLHL10Q6JEL2 608 aa21.35■■□□□ 1.01
CHPF-201ENST00000243776 KRBA2Q6ZNG9 492 aa21.35■■□□□ 1.01
CHPF-201ENST00000243776 ZFP91Q96JP5 570 aaPredicted RBP21.35■■□□□ 1.01
CHPF-201ENST00000243776 MAP3K14Q99558 947 aa21.35■■□□□ 1.01
CHPF-201ENST00000243776 LZTFL1Q9NQ48 299 aa21.35■■□□□ 1.01
CHPF-201ENST00000243776 HPSEQ9Y251 543 aa21.35■■□□□ 1.01
CHPF-201ENST00000243776 PHLPP2Q6ZVD8 1323 aa21.35■■□□□ 1.01
CHPF-201ENST00000243776 GOLGA8AA7E2F4 631 aa21.35■■□□□ 1.01
CHPF-201ENST00000243776 SNAP23O00161 211 aa21.35■■□□□ 1.01
CHPF-201ENST00000243776 BBXQ8WY36 941 aaPredicted RBP21.35■■□□□ 1.01
CHPF-201ENST00000243776 TFRCP02786 760 aaKnown RBP21.34■■□□□ 1.01
CHPF-201ENST00000243776 STX17P56962 302 aa21.34■■□□□ 1.01
CHPF-201ENST00000243776 USP49Q70CQ1 688 aa21.34■■□□□ 1.01
CHPF-201ENST00000243776 TMEM139Q8IV31 216 aa21.34■■□□□ 1.01
CHPF-201ENST00000243776 CHMP4CQ96CF2 233 aa21.34■■□□□ 1.01
CHPF-201ENST00000243776 ZBTB43O43298 467 aa21.34■■□□□ 1.01
CHPF-201ENST00000243776 ZRANB2O95218 330 aaKnown RBP eCLIP21.34■■□□□ 1.01
CHPF-201ENST00000243776 LRRFIP1Q32MZ4 808 aaKnown RBP21.34■■□□□ 1.01
CHPF-201ENST00000243776 RESP18Q5W5W9 173 aa21.34■■□□□ 1.01
CHPF-201ENST00000243776 TIGD1Q96MW7 591 aa21.34■■□□□ 1.01
CHPF-201ENST00000243776 SERTAD1Q9UHV2 236 aa21.34■■□□□ 1.01
CHPF-201ENST00000243776 ZMYM6O95789 1325 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms