RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 BSDC1Q9NW68 430 aaPredicted RBP18.85■□□□□ 0.61
UBE3D-201ENST00000237186 PCDHA7Q9UN72 937 aa18.85■□□□□ 0.61
UBE3D-201ENST00000237186 CNTNAP4Q9C0A0 1308 aa18.85■□□□□ 0.61
UBE3D-201ENST00000237186 ME1P48163 572 aa18.84■□□□□ 0.61
UBE3D-201ENST00000237186 ZNF165P49910 485 aa18.84■□□□□ 0.61
UBE3D-201ENST00000237186 AKNAD1Q5T1N1 836 aa18.84■□□□□ 0.61
UBE3D-201ENST00000237186 LUZP1Q86V48 1076 aa18.84■□□□□ 0.61
UBE3D-201ENST00000237186 LINC00116Q8NCU8 138 aa18.84■□□□□ 0.61
UBE3D-201ENST00000237186 STAG1Q8WVM7 1258 aa18.84■□□□□ 0.61
UBE3D-201ENST00000237186 NID2Q14112 1375 aa18.84■□□□□ 0.61
UBE3D-201ENST00000237186 ZBTB43O43298 467 aa18.84■□□□□ 0.61
UBE3D-201ENST00000237186 KINO60870 393 aaKnown RBP18.84■□□□□ 0.61
UBE3D-201ENST00000237186 TPM2P07951 284 aa18.84■□□□□ 0.61
UBE3D-201ENST00000237186 FMR1NBQ8N0W7 255 aaPredicted RBP18.84■□□□□ 0.61
UBE3D-201ENST00000237186 PIBF1Q8WXW3 757 aa18.84■□□□□ 0.61
UBE3D-201ENST00000237186 ZSWIM5Q9P217 1185 aa18.84■□□□□ 0.61
UBE3D-201ENST00000237186 LAMB2P55268 1798 aa18.83■□□□□ 0.61
UBE3D-201ENST00000237186 DOCK2Q92608 1830 aa18.83■□□□□ 0.61
UBE3D-201ENST00000237186 CDC27P30260 824 aa18.83■□□□□ 0.6
UBE3D-201ENST00000237186 ERFEQ4G0M1 354 aa18.83■□□□□ 0.6
UBE3D-201ENST00000237186 TMEM67Q5HYA8 995 aa18.83■□□□□ 0.6
UBE3D-201ENST00000237186 RC3H1Q5TC82 1133 aaKnown RBP18.83■□□□□ 0.6
UBE3D-201ENST00000237186 FSIP1Q8NA03 581 aa18.83■□□□□ 0.6
UBE3D-201ENST00000237186 MRPS27Q92552 414 aaKnown RBP18.83■□□□□ 0.6
UBE3D-201ENST00000237186 FAM217BQ9NTX9 383 aaPredicted RBP18.83■□□□□ 0.6
UBE3D-201ENST00000237186 POLR3DP05423 398 aaPredicted RBP18.82■□□□□ 0.6
UBE3D-201ENST00000237186 RAB11FIP4Q86YS3 637 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 ANKRD18AQ8IVF6 992 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 LCORLQ8N3X6 602 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 ALG1Q9BT22 464 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 SENP2Q9HC62 589 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 GNL3LQ9NVN8 582 aaKnown RBP18.82■□□□□ 0.6
UBE3D-201ENST00000237186 TACC3Q9Y6A5 838 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 STK36Q9NRP7 1315 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 GOLGA6L6A8MZA4 724 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 KIF28PB7ZC32 967 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 PLCB2Q00722 1185 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 STK38Q15208 465 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 SYNE3Q6ZMZ3 975 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 MFSD6Q6ZSS7 791 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 DNAJC25Q9H1X3 360 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 LRP2BPQ9P2M1 347 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 CLIC4Q9Y696 253 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 SLC4A4Q9Y6R1 1079 aa18.82■□□□□ 0.6
UBE3D-201ENST00000237186 IFIT3O14879 490 aaKnown RBP18.81■□□□□ 0.6
UBE3D-201ENST00000237186 SPTLC2O15270 562 aa18.81■□□□□ 0.6
UBE3D-201ENST00000237186 PRKAB2O43741 272 aa18.81■□□□□ 0.6
UBE3D-201ENST00000237186 RCAN1P53805 252 aa18.81■□□□□ 0.6
UBE3D-201ENST00000237186 CTDSPL2Q05D32 466 aa18.81■□□□□ 0.6
UBE3D-201ENST00000237186 IQCB1Q15051 598 aa18.81■□□□□ 0.6
UBE3D-201ENST00000237186 STX1AQ16623 288 aa18.81■□□□□ 0.6
UBE3D-201ENST00000237186 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.81■□□□□ 0.6
UBE3D-201ENST00000237186 PLA2G4DQ86XP0 818 aa18.81■□□□□ 0.6
UBE3D-201ENST00000237186 TTC12Q9H892 705 aaPredicted RBP18.81■□□□□ 0.6
UBE3D-201ENST00000237186 COL5A3P25940 1745 aaPredicted RBP18.81■□□□□ 0.6
UBE3D-201ENST00000237186 MYH15Q9Y2K3 1946 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 TIAM2Q8IVF5 1701 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 ANO1Q5XXA6 986 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 TMTC2Q8N394 836 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 RNF41Q9H4P4 317 aaPredicted RBP18.8■□□□□ 0.6
UBE3D-201ENST00000237186 GJB4Q9NTQ9 266 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 ANAPC4Q9UJX5 808 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 MINPP1Q9UNW1 487 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 SLC12A7Q9Y666 1083 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 AFF2P51816 1311 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 C4AP0C0L4 1744 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 C4BP0C0L5 1744 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 GOLGA8AA7E2F4 631 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 IFNAR1P17181 557 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 U2AF2P26368 475 aaKnown RBP eCLIP18.8■□□□□ 0.6
UBE3D-201ENST00000237186 IARSP41252 1262 aaKnown RBP18.8■□□□□ 0.6
UBE3D-201ENST00000237186 SLC39A14Q15043 492 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 SF3A1Q15459 793 aaKnown RBP18.8■□□□□ 0.6
UBE3D-201ENST00000237186 KRT40Q6A162 431 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 NFXL1Q6ZNB6 911 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 C3orf67Q6ZVT6 689 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 MICU3Q86XE3 530 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 GJD4Q96KN9 370 aaPredicted RBP18.8■□□□□ 0.6
UBE3D-201ENST00000237186 ZNF830Q96NB3 372 aaPredicted RBP18.8■□□□□ 0.6
UBE3D-201ENST00000237186 BCL2L12Q9HB09 334 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 INCENPQ9NQS7 918 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 SPTLC3Q9NUV7 552 aa18.8■□□□□ 0.6
UBE3D-201ENST00000237186 THSD7AQ9UPZ6 1657 aa18.79■□□□□ 0.6
UBE3D-201ENST00000237186 MYO5AQ9Y4I1 1855 aaKnown RBP18.79■□□□□ 0.6
UBE3D-201ENST00000237186 BCORQ6W2J9 1755 aa18.79■□□□□ 0.6
UBE3D-201ENST00000237186 ZBTB22O15209 634 aa18.79■□□□□ 0.6
UBE3D-201ENST00000237186 TDO2P48775 406 aa18.79■□□□□ 0.6
UBE3D-201ENST00000237186 AXDND1Q5T1B0 1012 aaPredicted RBP18.79■□□□□ 0.6
UBE3D-201ENST00000237186 SARM1Q6SZW1 724 aa18.79■□□□□ 0.6
UBE3D-201ENST00000237186 ANO10Q9NW15 660 aa18.79■□□□□ 0.6
UBE3D-201ENST00000237186 CCDC69A6NI79 296 aa18.78■□□□□ 0.6
UBE3D-201ENST00000237186 RANBP6O60518 1105 aaKnown RBP18.78■□□□□ 0.6
UBE3D-201ENST00000237186 CYP7A1P22680 504 aa18.78■□□□□ 0.6
UBE3D-201ENST00000237186 CMA1P23946 247 aa18.78■□□□□ 0.6
UBE3D-201ENST00000237186 ZNF75DP51815 510 aa18.78■□□□□ 0.6
UBE3D-201ENST00000237186 SART3Q15020 963 aaKnown RBP18.78■□□□□ 0.6
UBE3D-201ENST00000237186 VPS37DQ86XT2 251 aa18.78■□□□□ 0.6
UBE3D-201ENST00000237186 NARFQ9UHQ1 456 aa18.78■□□□□ 0.6
UBE3D-201ENST00000237186 SEMA3EO15041 775 aa18.77■□□□□ 0.6
UBE3D-201ENST00000237186 RPS6KA4O75676 772 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms