RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 CHMLP26374 656 aa12.26□□□□□ -0.45
HMGCL-201ENST00000235958 BTDP43251 543 aa12.26□□□□□ -0.45
HMGCL-201ENST00000235958 DYNLL1P63167 89 aaKnown RBP12.26□□□□□ -0.45
HMGCL-201ENST00000235958 ZMYM1Q5SVZ6 1142 aa12.26□□□□□ -0.45
HMGCL-201ENST00000235958 CDC42EP5Q6NZY7 148 aa12.26□□□□□ -0.45
HMGCL-201ENST00000235958 PNMA8AQ86V59 439 aaPredicted RBP12.26□□□□□ -0.45
HMGCL-201ENST00000235958 APPBP2Q92624 585 aa12.26□□□□□ -0.45
HMGCL-201ENST00000235958 FAM227BQ96M60 508 aa12.26□□□□□ -0.45
HMGCL-201ENST00000235958 SEC62Q99442 399 aaKnown RBP12.26□□□□□ -0.45
HMGCL-201ENST00000235958 NOL10Q9BSC4 688 aaKnown RBP12.26□□□□□ -0.45
HMGCL-201ENST00000235958 PUS7LQ9H0K6 701 aaKnown RBP12.26□□□□□ -0.45
HMGCL-201ENST00000235958 GPBP1L1Q9HC44 474 aaPredicted RBP12.26□□□□□ -0.45
HMGCL-201ENST00000235958 AATFQ9NY61 560 aaKnown RBP eCLIP12.26□□□□□ -0.45
HMGCL-201ENST00000235958 WDR90Q96KV7 1748 aa12.25□□□□□ -0.45
HMGCL-201ENST00000235958 MAGEB6P1A0A0J9YX57 407 aa12.25□□□□□ -0.45
HMGCL-201ENST00000235958 RHBDL3P58872 404 aa12.25□□□□□ -0.45
HMGCL-201ENST00000235958 NMIQ13287 307 aaPredicted RBP12.25□□□□□ -0.45
HMGCL-201ENST00000235958 EAPPQ56P03 285 aaPredicted RBP12.25□□□□□ -0.45
HMGCL-201ENST00000235958 CWC27Q6UX04 472 aaKnown RBP12.25□□□□□ -0.45
HMGCL-201ENST00000235958 RIOK1Q9BRS2 568 aaKnown RBP12.25□□□□□ -0.45
HMGCL-201ENST00000235958 DIAPH3Q9NSV4 1193 aa12.25□□□□□ -0.45
HMGCL-201ENST00000235958 ZNF70Q9UC06 446 aaPredicted RBP12.25□□□□□ -0.45
HMGCL-201ENST00000235958 ASTN2O75129 1339 aaPredicted RBP12.25□□□□□ -0.45
HMGCL-201ENST00000235958 CLRN2A0PK11 232 aa12.24□□□□□ -0.45
HMGCL-201ENST00000235958 MYO1BO43795 1136 aa12.24□□□□□ -0.45
HMGCL-201ENST00000235958 PLCG2P16885 1265 aa12.24□□□□□ -0.45
HMGCL-201ENST00000235958 MCMDC2Q4G0Z9 681 aa12.24□□□□□ -0.45
HMGCL-201ENST00000235958 SH3RF3Q8TEJ3 882 aaPredicted RBP12.24□□□□□ -0.45
HMGCL-201ENST00000235958 ZC3H15Q8WU90 426 aaKnown RBP12.24□□□□□ -0.45
HMGCL-201ENST00000235958 STRBPQ96SI9 672 aaKnown RBP12.24□□□□□ -0.45
HMGCL-201ENST00000235958 ARMT1Q9H993 441 aa12.24□□□□□ -0.45
HMGCL-201ENST00000235958 HELLSQ9NRZ9 838 aa12.24□□□□□ -0.45
HMGCL-201ENST00000235958 PGAP2Q9UHJ9 254 aa12.24□□□□□ -0.45
HMGCL-201ENST00000235958 CLEC11AQ9Y240 323 aa12.24□□□□□ -0.45
HMGCL-201ENST00000235958 A0A0D9SFI3 127 aa12.23□□□□□ -0.45
HMGCL-201ENST00000235958 M0R2C6 588 aa12.23□□□□□ -0.45
HMGCL-201ENST00000235958 MBD4O95243 580 aa12.23□□□□□ -0.45
HMGCL-201ENST00000235958 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
HMGCL-201ENST00000235958 POTEJP0CG39 1038 aa12.23□□□□□ -0.45
HMGCL-201ENST00000235958 CACNB3P54284 484 aa12.23□□□□□ -0.45
HMGCL-201ENST00000235958 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
HMGCL-201ENST00000235958 ANGEL2Q5VTE6 544 aaKnown RBP12.23□□□□□ -0.45
HMGCL-201ENST00000235958 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
HMGCL-201ENST00000235958 AIDAQ96BJ3 306 aa12.23□□□□□ -0.45
HMGCL-201ENST00000235958 SCAF8Q9UPN6 1271 aaKnown RBP12.23□□□□□ -0.45
HMGCL-201ENST00000235958 ADAMTSL1Q8N6G6 1762 aa12.23□□□□□ -0.45
HMGCL-201ENST00000235958 GPAA1O43292 621 aa12.22□□□□□ -0.45
HMGCL-201ENST00000235958 CDC45O75419 566 aa12.22□□□□□ -0.45
HMGCL-201ENST00000235958 WDHD1O75717 1129 aaPredicted RBP12.22□□□□□ -0.45
HMGCL-201ENST00000235958 CCDC129Q6ZRS4 1044 aa12.22□□□□□ -0.45
HMGCL-201ENST00000235958 CERS3Q8IU89 383 aa12.22□□□□□ -0.45
HMGCL-201ENST00000235958 TEX11Q8IYF3 940 aa12.22□□□□□ -0.45
HMGCL-201ENST00000235958 LCORLQ8N3X6 602 aa12.22□□□□□ -0.45
HMGCL-201ENST00000235958 TGFBRAP1Q8WUH2 860 aa12.22□□□□□ -0.45
HMGCL-201ENST00000235958 RUFY2Q8WXA3 655 aa12.22□□□□□ -0.45
HMGCL-201ENST00000235958 DCPSQ96C86 337 aaKnown RBP12.22□□□□□ -0.45
HMGCL-201ENST00000235958 TMOD2Q9NZR1 351 aa12.22□□□□□ -0.45
HMGCL-201ENST00000235958 RFX7Q2KHR2 1363 aa12.21□□□□□ -0.45
HMGCL-201ENST00000235958 TCP10L2B9ZVM9 353 aa12.21□□□□□ -0.45
HMGCL-201ENST00000235958 PATL2C9JE40 543 aaKnown RBP12.21□□□□□ -0.45
HMGCL-201ENST00000235958 KIF3CO14782 793 aa12.21□□□□□ -0.45
HMGCL-201ENST00000235958 PRKAB2O43741 272 aa12.21□□□□□ -0.45
HMGCL-201ENST00000235958 TCP10Q12799 353 aa12.21□□□□□ -0.45
HMGCL-201ENST00000235958 NFIAQ12857 509 aa12.21□□□□□ -0.45
HMGCL-201ENST00000235958 FKBP1CQ5VVH2 108 aa12.21□□□□□ -0.45
HMGCL-201ENST00000235958 ZFPM1Q8IX07 1006 aa12.21□□□□□ -0.45
HMGCL-201ENST00000235958 IDI2Q9BXS1 227 aa12.21□□□□□ -0.45
HMGCL-201ENST00000235958 CRNKL1Q9BZJ0 848 aaKnown RBP12.21□□□□□ -0.45
HMGCL-201ENST00000235958 VEZTQ9HBM0 779 aa12.21□□□□□ -0.45
HMGCL-201ENST00000235958 FAM198AQ9UFP1 575 aa12.21□□□□□ -0.45
HMGCL-201ENST00000235958 SLC4A4Q9Y6R1 1079 aa12.21□□□□□ -0.45
HMGCL-201ENST00000235958 GSG1L2A8MUP6 293 aa12.2□□□□□ -0.46
HMGCL-201ENST00000235958 SGSM2O43147 1006 aa12.2□□□□□ -0.46
HMGCL-201ENST00000235958 APPP05067 770 aa12.2□□□□□ -0.46
HMGCL-201ENST00000235958 USP5P45974 858 aa12.2□□□□□ -0.46
HMGCL-201ENST00000235958 RASA3Q14644 834 aa12.2□□□□□ -0.46
HMGCL-201ENST00000235958 MAP1SQ66K74 1059 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-201ENST00000235958 CASC1Q6TDU7 716 aa12.2□□□□□ -0.46
HMGCL-201ENST00000235958 ZNF589Q86UQ0 364 aaPredicted RBP12.2□□□□□ -0.46
HMGCL-201ENST00000235958 USP48Q86UV5 1035 aa12.2□□□□□ -0.46
HMGCL-201ENST00000235958 LDHDQ86WU2 507 aa12.2□□□□□ -0.46
HMGCL-201ENST00000235958 SDR42E1Q8WUS8 393 aa12.2□□□□□ -0.46
HMGCL-201ENST00000235958 IL25Q9H293 177 aa12.2□□□□□ -0.46
HMGCL-201ENST00000235958 DDX4Q9NQI0 724 aaKnown RBP12.2□□□□□ -0.46
HMGCL-201ENST00000235958 GGA3Q9NZ52 723 aa12.2□□□□□ -0.46
HMGCL-201ENST00000235958 PITPNM2Q9BZ72 1349 aa12.19□□□□□ -0.46
HMGCL-201ENST00000235958 ENTPD3O75355 529 aa12.19□□□□□ -0.46
HMGCL-201ENST00000235958 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
HMGCL-201ENST00000235958 GNAT2P19087 354 aa12.19□□□□□ -0.46
HMGCL-201ENST00000235958 MFAP1P55081 439 aaKnown RBP12.19□□□□□ -0.46
HMGCL-201ENST00000235958 PICALMQ13492 652 aa12.19□□□□□ -0.46
HMGCL-201ENST00000235958 VPS53Q5VIR6 699 aa12.19□□□□□ -0.46
HMGCL-201ENST00000235958 DLK2Q6UY11 383 aa12.19□□□□□ -0.46
HMGCL-201ENST00000235958 KRT26Q7Z3Y9 468 aa12.19□□□□□ -0.46
HMGCL-201ENST00000235958 FAM83AQ86UY5 434 aa12.19□□□□□ -0.46
HMGCL-201ENST00000235958 APOBEC3FQ8IUX4 373 aaKnown RBP12.19□□□□□ -0.46
HMGCL-201ENST00000235958 MAPKAPK5Q8IW41 473 aa12.19□□□□□ -0.46
HMGCL-201ENST00000235958 SULF1Q8IWU6 871 aa12.19□□□□□ -0.46
HMGCL-201ENST00000235958 FAM151AQ8WW52 585 aa12.19□□□□□ -0.46
HMGCL-201ENST00000235958 ESYT1Q9BSJ8 1104 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms