RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 IDH1O75874 414 aaKnown RBP23.39■■□□□ 1.33
CENPA-201ENST00000233505 TMOD2Q9NZR1 351 aa23.39■■□□□ 1.33
CENPA-201ENST00000233505 TRAF5O00463 557 aa23.38■■□□□ 1.33
CENPA-201ENST00000233505 PDE1AP54750 535 aa23.38■■□□□ 1.33
CENPA-201ENST00000233505 FMR1Q06787 632 aaKnown RBP eCLIP23.38■■□□□ 1.33
CENPA-201ENST00000233505 TSHZ3Q63HK5 1081 aa23.38■■□□□ 1.33
CENPA-201ENST00000233505 BTDP43251 543 aa23.37■■□□□ 1.33
CENPA-201ENST00000233505 CDC42EP5Q6NZY7 148 aa23.37■■□□□ 1.33
CENPA-201ENST00000233505 DEFB129Q9H1M3 183 aa23.37■■□□□ 1.33
CENPA-201ENST00000233505 VEZTQ9HBM0 779 aa23.37■■□□□ 1.33
CENPA-201ENST00000233505 MAST2Q6P0Q8 1798 aa23.37■■□□□ 1.33
CENPA-201ENST00000233505 PPP4CP60510 307 aa23.36■■□□□ 1.33
CENPA-201ENST00000233505 CENPQQ7L2Z9 268 aaPredicted RBP23.36■■□□□ 1.33
CENPA-201ENST00000233505 FAM83AQ86UY5 434 aa23.36■■□□□ 1.33
CENPA-201ENST00000233505 CERS3Q8IU89 383 aa23.36■■□□□ 1.33
CENPA-201ENST00000233505 EDC3Q96F86 508 aaKnown RBP23.36■■□□□ 1.33
CENPA-201ENST00000233505 OSBPL3Q9H4L5 887 aa23.36■■□□□ 1.33
CENPA-201ENST00000233505 RFX7Q2KHR2 1363 aa23.36■■□□□ 1.33
CENPA-201ENST00000233505 TMEM88BA6NKF7 163 aa23.35■■□□□ 1.33
CENPA-201ENST00000233505 TNNI2P48788 182 aa23.35■■□□□ 1.33
CENPA-201ENST00000233505 CDCA5Q96FF9 252 aa23.35■■□□□ 1.33
CENPA-201ENST00000233505 IDI2Q9BXS1 227 aa23.35■■□□□ 1.33
CENPA-201ENST00000233505 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.35■■□□□ 1.33
CENPA-201ENST00000233505 BAG3O95817 575 aa23.34■■□□□ 1.33
CENPA-201ENST00000233505 PDE6AP16499 860 aa23.34■■□□□ 1.33
CENPA-201ENST00000233505 PLCG2P16885 1265 aa23.34■■□□□ 1.33
CENPA-201ENST00000233505 CYP7A1P22680 504 aa23.34■■□□□ 1.33
CENPA-201ENST00000233505 RHBDL3P58872 404 aa23.34■■□□□ 1.33
CENPA-201ENST00000233505 MAGEB6Q8N7X4 407 aa23.34■■□□□ 1.33
CENPA-201ENST00000233505 KBTBD3Q8NAB2 608 aa23.34■■□□□ 1.33
CENPA-201ENST00000233505 NOL10Q9BSC4 688 aaKnown RBP23.34■■□□□ 1.33
CENPA-201ENST00000233505 USP40Q9NVE5 1235 aa23.34■■□□□ 1.33
CENPA-201ENST00000233505 RPAP1Q9BWH6 1393 aaPredicted RBP23.34■■□□□ 1.33
CENPA-201ENST00000233505 NPM3O75607 178 aaKnown RBP23.33■■□□□ 1.33
CENPA-201ENST00000233505 CELF2O95319 508 aaKnown RBP23.33■■□□□ 1.33
CENPA-201ENST00000233505 RASA3Q14644 834 aa23.33■■□□□ 1.33
CENPA-201ENST00000233505 SLC9C2Q5TAH2 1124 aa23.33■■□□□ 1.33
CENPA-201ENST00000233505 ADGRA1Q86SQ6 560 aa23.33■■□□□ 1.33
CENPA-201ENST00000233505 PLEKHM2Q8IWE5 1019 aa23.33■■□□□ 1.33
CENPA-201ENST00000233505 CNTNAP1P78357 1384 aa23.32■■□□□ 1.32
CENPA-201ENST00000233505 TCRBV5S4A2TA0A5A2 114 aa23.32■■□□□ 1.32
CENPA-201ENST00000233505 CST9Q5W186 159 aa23.32■■□□□ 1.32
CENPA-201ENST00000233505 ZSCAN25Q6NSZ9 544 aa23.32■■□□□ 1.32
CENPA-201ENST00000233505 TICAM2Q86XR7 235 aa23.32■■□□□ 1.32
CENPA-201ENST00000233505 DOCK2Q92608 1830 aa23.31■■□□□ 1.32
CENPA-201ENST00000233505 TCP10L2B9ZVM9 353 aa23.31■■□□□ 1.32
CENPA-201ENST00000233505 ENTPD3O75355 529 aa23.31■■□□□ 1.32
CENPA-201ENST00000233505 WDHD1O75717 1129 aaPredicted RBP23.31■■□□□ 1.32
CENPA-201ENST00000233505 ADD2P35612 726 aa23.31■■□□□ 1.32
CENPA-201ENST00000233505 CACNB3P54284 484 aa23.31■■□□□ 1.32
CENPA-201ENST00000233505 FKBP1BP68106 108 aa23.31■■□□□ 1.32
CENPA-201ENST00000233505 UBE3CQ15386 1083 aa23.31■■□□□ 1.32
CENPA-201ENST00000233505 LRRFIP1Q32MZ4 808 aaKnown RBP23.31■■□□□ 1.32
CENPA-201ENST00000233505 DLK2Q6UY11 383 aa23.31■■□□□ 1.32
CENPA-201ENST00000233505 CCDC136Q96JN2 1154 aa23.31■■□□□ 1.32
CENPA-201ENST00000233505 SCAF8Q9UPN6 1271 aaKnown RBP23.31■■□□□ 1.32
CENPA-201ENST00000233505 ECM29Q5VYK3 1845 aa23.31■■□□□ 1.32
CENPA-201ENST00000233505 NF2P35240 595 aa23.3■■□□□ 1.32
CENPA-201ENST00000233505 NFIAQ12857 509 aa23.3■■□□□ 1.32
CENPA-201ENST00000233505 FAM151AQ8WW52 585 aa23.3■■□□□ 1.32
CENPA-201ENST00000233505 TEPSINQ96N21 525 aa23.3■■□□□ 1.32
CENPA-201ENST00000233505 FAM198AQ9UFP1 575 aa23.3■■□□□ 1.32
CENPA-201ENST00000233505 ZNF532Q9HCE3 1301 aa23.3■■□□□ 1.32
CENPA-201ENST00000233505 ZFYP08048 801 aaPredicted RBP23.29■■□□□ 1.32
CENPA-201ENST00000233505 PDE4AP27815 886 aa23.29■■□□□ 1.32
CENPA-201ENST00000233505 SUPT20HL1Q3ZLR7 823 aa23.29■■□□□ 1.32
CENPA-201ENST00000233505 AATFQ9NY61 560 aaKnown RBP eCLIP23.29■■□□□ 1.32
CENPA-201ENST00000233505 HSPA1AP0DMV8 641 aaKnown RBP23.28■■□□□ 1.32
CENPA-201ENST00000233505 HSPA1BP0DMV9 641 aaKnown RBP23.28■■□□□ 1.32
CENPA-201ENST00000233505 EVI5LQ96CN4 794 aa23.28■■□□□ 1.32
CENPA-201ENST00000233505 RIOK1Q9BRS2 568 aaKnown RBP23.28■■□□□ 1.32
CENPA-201ENST00000233505 GBA2Q9HCG7 927 aaPredicted RBP23.28■■□□□ 1.32
CENPA-201ENST00000233505 RGS3P49796 1198 aa23.27■■□□□ 1.32
CENPA-201ENST00000233505 PRAMEF18Q5VWM3 479 aa23.27■■□□□ 1.32
CENPA-201ENST00000233505 TEX11Q8IYF3 940 aa23.27■■□□□ 1.32
CENPA-201ENST00000233505 SH3RF3Q8TEJ3 882 aaPredicted RBP23.27■■□□□ 1.32
CENPA-201ENST00000233505 HOOK2Q96ED9 719 aa23.27■■□□□ 1.32
CENPA-201ENST00000233505 TMEM39BQ9GZU3 492 aa23.27■■□□□ 1.32
CENPA-201ENST00000233505 ZNF408Q9H9D4 720 aa23.27■■□□□ 1.32
CENPA-201ENST00000233505 ABT1Q9ULW3 272 aaKnown RBP23.27■■□□□ 1.32
CENPA-201ENST00000233505 TLL2Q9Y6L7 1015 aa23.27■■□□□ 1.32
CENPA-201ENST00000233505 COL2A1P02458 1487 aaPredicted RBP23.27■■□□□ 1.32
CENPA-201ENST00000233505 SSC5DA1L4H1 1573 aa23.27■■□□□ 1.32
CENPA-201ENST00000233505 MYH2Q9UKX2 1941 aa23.26■■□□□ 1.31
CENPA-201ENST00000233505 VEGFBP49765 207 aa23.26■■□□□ 1.31
CENPA-201ENST00000233505 C2orf69Q8N8R5 385 aa23.26■■□□□ 1.31
CENPA-201ENST00000233505 MIGA1Q8NAN2 632 aa23.26■■□□□ 1.31
CENPA-201ENST00000233505 PPP4R2Q9NY27 417 aa23.26■■□□□ 1.31
CENPA-201ENST00000233505 MAGEB6P1A0A0J9YX57 407 aa23.25■■□□□ 1.31
CENPA-201ENST00000233505 RNF113AO15541 343 aaKnown RBP23.25■■□□□ 1.31
CENPA-201ENST00000233505 NBPF12Q5TAG4 269 aaPredicted RBP23.25■■□□□ 1.31
CENPA-201ENST00000233505 HHIPL1Q96JK4 782 aa23.25■■□□□ 1.31
CENPA-201ENST00000233505 FSD1Q9BTV5 496 aa23.25■■□□□ 1.31
CENPA-201ENST00000233505 DDX4Q9NQI0 724 aaKnown RBP23.25■■□□□ 1.31
CENPA-201ENST00000233505 ATRNL1Q5VV63 1379 aa23.25■■□□□ 1.31
CENPA-201ENST00000233505 DYNLL1P63167 89 aaKnown RBP23.24■■□□□ 1.31
CENPA-201ENST00000233505 MAP3K11Q16584 847 aa23.24■■□□□ 1.31
CENPA-201ENST00000233505 SAPCD2Q86UD0 394 aa23.24■■□□□ 1.31
CENPA-201ENST00000233505 APPBP2Q92624 585 aa23.24■■□□□ 1.31
CENPA-201ENST00000233505 PAPPA2Q9BXP8 1791 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms