RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 FOXP4Q8IVH2 680 aaPredicted RBP17.8■□□□□ 0.44
VTN-201ENST00000226218 FUT8Q9BYC5 575 aa17.8■□□□□ 0.44
VTN-201ENST00000226218 TSPYL1Q9H0U9 437 aa17.8■□□□□ 0.44
VTN-201ENST00000226218 CASQ1P31415 396 aa17.8■□□□□ 0.44
VTN-201ENST00000226218 PIP4K2AP48426 406 aaPredicted RBP17.8■□□□□ 0.44
VTN-201ENST00000226218 SMC1AQ14683 1233 aaKnown RBP17.8■□□□□ 0.44
VTN-201ENST00000226218 TC2NQ8N9U0 490 aa17.8■□□□□ 0.44
VTN-201ENST00000226218 RABGGTAQ92696 567 aa17.8■□□□□ 0.44
VTN-201ENST00000226218 FER1L4A9Z1Z3 1794 aa17.79■□□□□ 0.44
VTN-201ENST00000226218 STX10O60499 249 aa17.79■□□□□ 0.44
VTN-201ENST00000226218 SNRPA1P09661 255 aaKnown RBP17.79■□□□□ 0.44
VTN-201ENST00000226218 BMP6P22004 513 aa17.79■□□□□ 0.44
VTN-201ENST00000226218 PDE4BQ07343 736 aa17.79■□□□□ 0.44
VTN-201ENST00000226218 PTPN21Q16825 1174 aa17.79■□□□□ 0.44
VTN-201ENST00000226218 ELOA2Q8IYF1 753 aaPredicted RBP17.79■□□□□ 0.44
VTN-201ENST00000226218 BAG1Q99933 345 aaPredicted RBP17.79■□□□□ 0.44
VTN-201ENST00000226218 FEZ2Q9UHY8 353 aaPredicted RBP17.79■□□□□ 0.44
VTN-201ENST00000226218 CDK11BP21127 795 aaKnown RBP17.78■□□□□ 0.44
VTN-201ENST00000226218 HAND2P61296 217 aa17.78■□□□□ 0.44
VTN-201ENST00000226218 IMMTQ16891 758 aaKnown RBP17.78■□□□□ 0.44
VTN-201ENST00000226218 PLBD2Q8NHP8 589 aa17.78■□□□□ 0.44
VTN-201ENST00000226218 PARD6BQ9BYG5 372 aa17.78■□□□□ 0.44
VTN-201ENST00000226218 ZCCHC17Q9NP64 241 aaKnown RBP17.78■□□□□ 0.44
VTN-201ENST00000226218 PSD3Q9NYI0 1048 aa17.78■□□□□ 0.44
VTN-201ENST00000226218 FGAP02671 866 aa17.78■□□□□ 0.44
VTN-201ENST00000226218 ZNF18P17022 549 aa17.78■□□□□ 0.44
VTN-201ENST00000226218 CDC27P30260 824 aa17.78■□□□□ 0.44
VTN-201ENST00000226218 GNG11P61952 73 aa17.78■□□□□ 0.44
VTN-201ENST00000226218 KRBA2Q6ZNG9 492 aa17.78■□□□□ 0.44
VTN-201ENST00000226218 TOGARAM2Q6ZUX3 1019 aa17.78■□□□□ 0.44
VTN-201ENST00000226218 VPS37DQ86XT2 251 aa17.78■□□□□ 0.44
VTN-201ENST00000226218 PARP4Q9UKK3 1724 aaKnown RBP17.77■□□□□ 0.44
VTN-201ENST00000226218 A0A1B0GUL7 405 aa17.77■□□□□ 0.44
VTN-201ENST00000226218 CPLX1O14810 134 aa17.77■□□□□ 0.44
VTN-201ENST00000226218 PHKG2P15735 406 aa17.77■□□□□ 0.44
VTN-201ENST00000226218 MDM2Q00987 491 aaPredicted RBP17.77■□□□□ 0.44
VTN-201ENST00000226218 OLFM4Q6UX06 510 aa17.77■□□□□ 0.44
VTN-201ENST00000226218 RAB11FIP4Q86YS3 637 aa17.77■□□□□ 0.44
VTN-201ENST00000226218 JMYQ8N9B5 988 aa17.77■□□□□ 0.44
VTN-201ENST00000226218 NCOA7Q8NI08 942 aa17.77■□□□□ 0.44
VTN-201ENST00000226218 ARFGAP3Q9NP61 516 aa17.77■□□□□ 0.44
VTN-201ENST00000226218 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.77■□□□□ 0.44
VTN-201ENST00000226218 MAP3K15Q6ZN16 1313 aa17.77■□□□□ 0.44
VTN-201ENST00000226218 EYA2O00167 538 aa17.77■□□□□ 0.43
VTN-201ENST00000226218 MAP2K7O14733 419 aa17.77■□□□□ 0.43
VTN-201ENST00000226218 LONRF3Q496Y0 759 aa17.77■□□□□ 0.43
VTN-201ENST00000226218 LRRC24Q50LG9 513 aa17.77■□□□□ 0.43
VTN-201ENST00000226218 AIFM3Q96NN9 605 aa17.77■□□□□ 0.43
VTN-201ENST00000226218 PCDHA5Q9Y5H7 936 aa17.77■□□□□ 0.43
VTN-201ENST00000226218 ZMYM6O95789 1325 aa17.77■□□□□ 0.43
VTN-201ENST00000226218 ESCO1Q5FWF5 840 aa17.76■□□□□ 0.43
VTN-201ENST00000226218 CUTAO60888 179 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 CIAO1O76071 339 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 JAKMIP3Q5VZ66 844 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 KRT40Q6A162 431 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 FAM177A1Q8N128 213 aaPredicted RBP17.75■□□□□ 0.43
VTN-201ENST00000226218 EXOC4Q96A65 974 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 DHX58Q96C10 678 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 CLIC6Q96NY7 704 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 ALG1Q9BT22 464 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 PKD1L3Q7Z443 1732 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 CCDC151A5D8V7 595 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 MEGF6O75095 1541 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 GOLGA1Q92805 767 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 CCDC34Q96HJ3 373 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 NBPF3Q9H094 633 aa17.75■□□□□ 0.43
VTN-201ENST00000226218 VGLL3A8MV65 326 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 H3BQF6 201 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 ZFYP08048 801 aaPredicted RBP17.74■□□□□ 0.43
VTN-201ENST00000226218 TXLNAP40222 546 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 GPS2Q13227 327 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 BRD3Q15059 726 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 NT5DC1Q5TFE4 455 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 CCDC102BQ68D86 513 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 SPECC1LQ69YQ0 1117 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 IQUBQ8NA54 791 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 ATG3Q9NT62 314 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 AKAP11Q9UKA4 1901 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 LONRF2Q1L5Z9 754 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 NKX2-3Q8TAU0 364 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 TRERF1Q96PN7 1200 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 MRPL44Q9H9J2 332 aaKnown RBP17.74■□□□□ 0.43
VTN-201ENST00000226218 KCNH3Q9ULD8 1083 aa17.74■□□□□ 0.43
VTN-201ENST00000226218 FOXN1O15353 648 aa17.73■□□□□ 0.43
VTN-201ENST00000226218 FMR1Q06787 632 aaKnown RBP eCLIP17.73■□□□□ 0.43
VTN-201ENST00000226218 ZSCAN26Q16670 478 aa17.73■□□□□ 0.43
VTN-201ENST00000226218 MSL3Q8N5Y2 521 aaKnown RBP17.73■□□□□ 0.43
VTN-201ENST00000226218 CNNM3Q8NE01 707 aa17.73■□□□□ 0.43
VTN-201ENST00000226218 HNRNPLLQ8WVV9 542 aaKnown RBP17.73■□□□□ 0.43
VTN-201ENST00000226218 APPBP2Q92624 585 aa17.73■□□□□ 0.43
VTN-201ENST00000226218 ZNF594Q96JF6 807 aaPredicted RBP17.73■□□□□ 0.43
VTN-201ENST00000226218 MED15Q96RN5 788 aa17.73■□□□□ 0.43
VTN-201ENST00000226218 MAN1B1Q9UKM7 699 aa17.73■□□□□ 0.43
VTN-201ENST00000226218 SARSP49591 514 aaKnown RBP17.72■□□□□ 0.43
VTN-201ENST00000226218 ADKP55263 362 aaKnown RBP17.72■□□□□ 0.43
VTN-201ENST00000226218 RALYLQ86SE5 291 aaKnown RBP17.72■□□□□ 0.43
VTN-201ENST00000226218 ENOX1Q8TC92 643 aaKnown RBP17.72■□□□□ 0.43
VTN-201ENST00000226218 PUS7LQ9H0K6 701 aaKnown RBP17.72■□□□□ 0.43
VTN-201ENST00000226218 ADAM21Q9UKJ8 722 aa17.72■□□□□ 0.43
VTN-201ENST00000226218 MYO5AQ9Y4I1 1855 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms