RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 NXPE4Q6UWF7 544 aa9.71□□□□□ -0.86
CCL1-201ENST00000225842 ZIC5Q96T25 663 aa9.71□□□□□ -0.86
CCL1-201ENST00000225842 FAM8A1Q9UBU6 413 aa9.71□□□□□ -0.86
CCL1-201ENST00000225842 GPC6Q9Y625 555 aaPredicted RBP9.71□□□□□ -0.86
CCL1-201ENST00000225842 GPRASP1Q5JY77 1395 aa9.71□□□□□ -0.86
CCL1-201ENST00000225842 USP31Q70CQ4 1352 aa9.71□□□□□ -0.86
CCL1-201ENST00000225842 SHANK3Q9BYB0 1731 aa9.7□□□□□ -0.86
CCL1-201ENST00000225842 GADD45BO75293 160 aaPredicted RBP9.7□□□□□ -0.86
CCL1-201ENST00000225842 TXNRD1Q16881 649 aa9.7□□□□□ -0.86
CCL1-201ENST00000225842 TMEM132EQ6IEE7 984 aa9.7□□□□□ -0.86
CCL1-201ENST00000225842 PTF1AQ7RTS3 328 aa9.7□□□□□ -0.86
CCL1-201ENST00000225842 LINC00528Q8N1L1 170 aa9.7□□□□□ -0.86
CCL1-201ENST00000225842 DNAJC5GQ8N7S2 189 aa9.7□□□□□ -0.86
CCL1-201ENST00000225842 HPS1Q92902 700 aa9.7□□□□□ -0.86
CCL1-201ENST00000225842 GMLQ99445 158 aa9.7□□□□□ -0.86
CCL1-201ENST00000225842 ABCC11Q96J66 1382 aa9.7□□□□□ -0.86
CCL1-201ENST00000225842 OVOS2A0A0G2JMS6 1433 aa9.69□□□□□ -0.86
CCL1-201ENST00000225842 OVOS2A0A0J9YW53 1432 aa9.69□□□□□ -0.86
CCL1-201ENST00000225842 OVOS2Q6IE36 1432 aa9.69□□□□□ -0.86
CCL1-201ENST00000225842 ABCA3Q99758 1704 aa9.69□□□□□ -0.86
CCL1-201ENST00000225842 BCO2Q9BYV7 579 aa9.69□□□□□ -0.86
CCL1-201ENST00000225842 THRAP3Q9Y2W1 955 aaKnown RBP9.69□□□□□ -0.86
CCL1-201ENST00000225842 EREGO14944 169 aa9.68□□□□□ -0.86
CCL1-201ENST00000225842 GDF9O60383 454 aa9.68□□□□□ -0.86
CCL1-201ENST00000225842 GRNP28799 593 aaKnown RBP9.68□□□□□ -0.86
CCL1-201ENST00000225842 C1orf127Q8N9H9 656 aa9.68□□□□□ -0.86
CCL1-201ENST00000225842 TOR4AQ9NXH8 423 aa9.68□□□□□ -0.86
CCL1-201ENST00000225842 V9GY48 417 aaPredicted RBP9.68□□□□□ -0.86
CCL1-201ENST00000225842 SSH2Q76I76 1423 aa9.67□□□□□ -0.86
CCL1-201ENST00000225842 XYLBO75191 536 aa9.67□□□□□ -0.86
CCL1-201ENST00000225842 UPP2O95045 317 aa9.67□□□□□ -0.86
CCL1-201ENST00000225842 YBX3P16989 372 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCL1-201ENST00000225842 RHOQP17081 205 aa9.67□□□□□ -0.86
CCL1-201ENST00000225842 CANXP27824 592 aaKnown RBP9.67□□□□□ -0.86
CCL1-201ENST00000225842 POLD1P28340 1107 aa9.67□□□□□ -0.86
CCL1-201ENST00000225842 MSX1P28360 303 aa9.67□□□□□ -0.86
CCL1-201ENST00000225842 NLGN2Q8NFZ4 835 aa9.67□□□□□ -0.86
CCL1-201ENST00000225842 RNF217Q8TC41 542 aa9.67□□□□□ -0.86
CCL1-201ENST00000225842 CHRDQ9H2X0 955 aa9.67□□□□□ -0.86
CCL1-201ENST00000225842 COPRSQ9NQ92 184 aa9.67□□□□□ -0.86
CCL1-201ENST00000225842 CUEDC1Q9NWM3 386 aaPredicted RBP9.67□□□□□ -0.86
CCL1-201ENST00000225842 CNTN3Q9P232 1028 aa9.67□□□□□ -0.86
CCL1-201ENST00000225842 FMN2Q9NZ56 1722 aa9.66□□□□□ -0.86
CCL1-201ENST00000225842 BMP2P12643 396 aa9.66□□□□□ -0.86
CCL1-201ENST00000225842 CDK11BP21127 795 aaKnown RBP9.66□□□□□ -0.86
CCL1-201ENST00000225842 SAFB2Q14151 953 aaKnown RBP eCLIP9.66□□□□□ -0.86
CCL1-201ENST00000225842 CCDC144BQ3MJ40 725 aa9.66□□□□□ -0.86
CCL1-201ENST00000225842 C6orf118Q5T5N4 469 aa9.66□□□□□ -0.86
CCL1-201ENST00000225842 CEP63Q96MT8 703 aa9.66□□□□□ -0.86
CCL1-201ENST00000225842 TIMMDC1Q9NPL8 285 aa9.66□□□□□ -0.86
CCL1-201ENST00000225842 DHX57Q6P158 1386 aaKnown RBP9.65□□□□□ -0.86
CCL1-201ENST00000225842 ADGRF5Q8IZF2 1346 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 CLTCL1P53675 1640 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 A0A1W2PNR3 127 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 CAPN5O15484 640 aaPredicted RBP9.65□□□□□ -0.86
CCL1-201ENST00000225842 EPB42P16452 691 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 ST13P50502 369 aaKnown RBP9.65□□□□□ -0.86
CCL1-201ENST00000225842 TYRO3Q06418 890 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 PAK2Q13177 524 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 GRM2Q14416 872 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 DDB1Q16531 1140 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 LYSMD3Q7Z3D4 306 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 VPS37DQ86XT2 251 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 SPNS2Q8IVW8 549 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 GALNT12Q8IXK2 581 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 NGDNQ8NEJ9 315 aaKnown RBP9.65□□□□□ -0.86
CCL1-201ENST00000225842 ARMC5Q96C12 935 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 GJA3Q9Y6H8 435 aa9.65□□□□□ -0.86
CCL1-201ENST00000225842 ERMP1Q7Z2K6 904 aa9.64□□□□□ -0.87
CCL1-201ENST00000225842 MCF2L2Q86YR7 1114 aa9.64□□□□□ -0.87
CCL1-201ENST00000225842 SRCIN1Q9C0H9 1055 aa9.64□□□□□ -0.87
CCL1-201ENST00000225842 ABI2Q9NYB9 513 aaPredicted RBP9.64□□□□□ -0.87
CCL1-201ENST00000225842 A0A1B0GTH6 734 aa9.63□□□□□ -0.87
CCL1-201ENST00000225842 NUTM2GQ5VZR2 741 aa9.63□□□□□ -0.87
CCL1-201ENST00000225842 SUV39H2Q9H5I1 410 aa9.63□□□□□ -0.87
CCL1-201ENST00000225842 GPAMQ9HCL2 828 aa9.63□□□□□ -0.87
CCL1-201ENST00000225842 KBTBD4Q9NVX7 518 aa9.63□□□□□ -0.87
CCL1-201ENST00000225842 TTF2Q9UNY4 1162 aaKnown RBP9.63□□□□□ -0.87
CCL1-201ENST00000225842 CES1P23141 567 aa9.62□□□□□ -0.87
CCL1-201ENST00000225842 WDR44Q5JSH3 913 aa9.62□□□□□ -0.87
CCL1-201ENST00000225842 TTC39BQ5VTQ0 682 aaPredicted RBP9.62□□□□□ -0.87
CCL1-201ENST00000225842 NOP9Q86U38 636 aaKnown RBP9.62□□□□□ -0.87
CCL1-201ENST00000225842 SLC16A10Q8TF71 515 aa9.62□□□□□ -0.87
CCL1-201ENST00000225842 PRAM1Q96QH2 718 aa9.62□□□□□ -0.87
CCL1-201ENST00000225842 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCL1-201ENST00000225842 RUBCNLQ9H714 662 aa9.62□□□□□ -0.87
CCL1-201ENST00000225842 LATS2Q9NRM7 1088 aa9.62□□□□□ -0.87
CCL1-201ENST00000225842 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.62□□□□□ -0.87
CCL1-201ENST00000225842 ANKARQ7Z5J8 1434 aa9.62□□□□□ -0.87
CCL1-201ENST00000225842 YTHDC2Q9H6S0 1430 aaKnown RBP9.62□□□□□ -0.87
CCL1-201ENST00000225842 F6X3S4 739 aa9.61□□□□□ -0.87
CCL1-201ENST00000225842 STK10O94804 968 aaKnown RBP9.61□□□□□ -0.87
CCL1-201ENST00000225842 FGRP09769 529 aa9.61□□□□□ -0.87
CCL1-201ENST00000225842 GJA8P48165 433 aa9.61□□□□□ -0.87
CCL1-201ENST00000225842 NLRP13Q86W25 1043 aa9.61□□□□□ -0.87
CCL1-201ENST00000225842 JMYQ8N9B5 988 aa9.61□□□□□ -0.87
CCL1-201ENST00000225842 MARCH10Q8NA82 808 aaPredicted RBP9.61□□□□□ -0.87
CCL1-201ENST00000225842 GPRASP2Q96D09 838 aa9.61□□□□□ -0.87
CCL1-201ENST00000225842 EHD4Q9H223 541 aa9.61□□□□□ -0.87
CCL1-201ENST00000225842 PIF1Q9H611 641 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms