RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 C16orf54Q6UWD8 224 aa10.43□□□□□ -0.74
VSIG1-201ENST00000217957 DDX46Q7L014 1031 aaKnown RBP10.43□□□□□ -0.74
VSIG1-201ENST00000217957 MAGEB6Q8N7X4 407 aa10.43□□□□□ -0.74
VSIG1-201ENST00000217957 KCNK17Q96T54 332 aa10.43□□□□□ -0.74
VSIG1-201ENST00000217957 DDX20Q9UHI6 824 aaKnown RBP10.43□□□□□ -0.74
VSIG1-201ENST00000217957 POLG2Q9UHN1 485 aa10.43□□□□□ -0.74
VSIG1-201ENST00000217957 NOL7Q9UMY1 257 aaKnown RBP10.43□□□□□ -0.74
VSIG1-201ENST00000217957 C1orf228Q6PIY5 440 aa10.43□□□□□ -0.74
VSIG1-201ENST00000217957 NPHS2Q9NP85 383 aa10.43□□□□□ -0.74
VSIG1-201ENST00000217957 FOXD3Q9UJU5 478 aaPredicted RBP10.43□□□□□ -0.74
VSIG1-201ENST00000217957 PCDHB11Q9Y5F2 797 aa10.43□□□□□ -0.74
VSIG1-201ENST00000217957 A6NJY4 79 aa10.42□□□□□ -0.74
VSIG1-201ENST00000217957 CFHP08603 1231 aa10.42□□□□□ -0.74
VSIG1-201ENST00000217957 NUDT7P0C024 238 aa10.42□□□□□ -0.74
VSIG1-201ENST00000217957 EIF4A3P38919 411 aaKnown RBP10.42□□□□□ -0.74
VSIG1-201ENST00000217957 CITED4Q96RK1 184 aa10.42□□□□□ -0.74
VSIG1-201ENST00000217957 MCM8Q9UJA3 840 aa10.42□□□□□ -0.74
VSIG1-201ENST00000217957 FGD6Q6ZV73 1430 aa10.42□□□□□ -0.74
VSIG1-201ENST00000217957 VDRP11473 427 aa10.42□□□□□ -0.74
VSIG1-201ENST00000217957 CNNM4Q6P4Q7 775 aa10.42□□□□□ -0.74
VSIG1-201ENST00000217957 GPR152Q8TDT2 470 aa10.42□□□□□ -0.74
VSIG1-201ENST00000217957 MPP4Q96JB8 637 aa10.42□□□□□ -0.74
VSIG1-201ENST00000217957 USP25Q9UHP3 1055 aa10.42□□□□□ -0.74
VSIG1-201ENST00000217957 CASKIN1Q8WXD9 1431 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 TMEM229AB2RXF0 380 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 GJB6O95452 261 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 ZSCAN20P17040 1043 aaPredicted RBP10.41□□□□□ -0.74
VSIG1-201ENST00000217957 LEO1Q8WVC0 666 aaPredicted RBP10.41□□□□□ -0.74
VSIG1-201ENST00000217957 RELTQ969Z4 430 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 ZBTB21Q9ULJ3 1066 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 PCDHGA4Q9Y5G9 962 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 CD44P16070 742 aaKnown RBP10.41□□□□□ -0.74
VSIG1-201ENST00000217957 CHAF1AQ13111 956 aaPredicted RBP10.41□□□□□ -0.74
VSIG1-201ENST00000217957 COBLL1Q53SF7 1204 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 MFSD3Q96ES6 412 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 GGNBP2Q9H3C7 697 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 KDM5DQ9BY66 1539 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 UNC13BO14795 1591 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 ZRANB2O95218 330 aaKnown RBP eCLIP10.41□□□□□ -0.74
VSIG1-201ENST00000217957 POLR3DP05423 398 aaPredicted RBP10.41□□□□□ -0.74
VSIG1-201ENST00000217957 COL6A1P12109 1028 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 SARSP49591 514 aaKnown RBP10.41□□□□□ -0.74
VSIG1-201ENST00000217957 PICALMQ13492 652 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 AFAP1L2Q8N4X5 818 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 KIFC2Q96AC6 838 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 TSPAN18Q96SJ8 248 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 OBP2AQ9NY56 170 aa10.41□□□□□ -0.74
VSIG1-201ENST00000217957 TIAM1Q13009 1591 aa10.4□□□□□ -0.74
VSIG1-201ENST00000217957 TLR3O15455 904 aaKnown RBP10.4□□□□□ -0.74
VSIG1-201ENST00000217957 NUDT16Q96DE0 195 aaKnown RBP10.4□□□□□ -0.74
VSIG1-201ENST00000217957 CAAP1Q9H8G2 361 aa10.4□□□□□ -0.74
VSIG1-201ENST00000217957 KMT5AQ9NQR1 393 aa10.4□□□□□ -0.74
VSIG1-201ENST00000217957 L1CAMP32004 1257 aa10.4□□□□□ -0.75
VSIG1-201ENST00000217957 TMPRSS15P98073 1019 aa10.4□□□□□ -0.75
VSIG1-201ENST00000217957 GRM3Q14832 879 aa10.4□□□□□ -0.75
VSIG1-201ENST00000217957 ABCB5Q2M3G0 1257 aa10.4□□□□□ -0.75
VSIG1-201ENST00000217957 FAM102BQ5T8I3 360 aa10.4□□□□□ -0.75
VSIG1-201ENST00000217957 MRM1Q6IN84 353 aaKnown RBP10.4□□□□□ -0.75
VSIG1-201ENST00000217957 SELENOOQ9BVL4 669 aa10.4□□□□□ -0.75
VSIG1-201ENST00000217957 SLC12A5Q9H2X9 1139 aa10.4□□□□□ -0.75
VSIG1-201ENST00000217957 KLK14Q9P0G3 267 aa10.4□□□□□ -0.75
VSIG1-201ENST00000217957 USP20Q9Y2K6 914 aa10.4□□□□□ -0.75
VSIG1-201ENST00000217957 CTTNBP2Q8WZ74 1663 aa10.4□□□□□ -0.75
VSIG1-201ENST00000217957 ATAD2Q6PL18 1390 aa10.4□□□□□ -0.75
VSIG1-201ENST00000217957 C9orf84Q5VXU9 1444 aa10.4□□□□□ -0.75
VSIG1-201ENST00000217957 DDAH1O94760 285 aa10.39□□□□□ -0.75
VSIG1-201ENST00000217957 SOX9P48436 509 aa10.39□□□□□ -0.75
VSIG1-201ENST00000217957 IRX5P78411 483 aaPredicted RBP10.39□□□□□ -0.75
VSIG1-201ENST00000217957 NUCB1Q02818 461 aa10.39□□□□□ -0.75
VSIG1-201ENST00000217957 ALFQ53S48 1182 aa10.39□□□□□ -0.75
VSIG1-201ENST00000217957 SRRTQ9BXP5 876 aaKnown RBP10.39□□□□□ -0.75
VSIG1-201ENST00000217957 NBPF3Q9H094 633 aa10.39□□□□□ -0.75
VSIG1-201ENST00000217957 TRHDEQ9UKU6 1024 aa10.39□□□□□ -0.75
VSIG1-201ENST00000217957 NBPF26B4DH59 902 aa10.39□□□□□ -0.75
VSIG1-201ENST00000217957 ALG1L2C9J202 215 aa10.39□□□□□ -0.75
VSIG1-201ENST00000217957 C6orf15Q6UXA7 325 aaPredicted RBP10.39□□□□□ -0.75
VSIG1-201ENST00000217957 NYAP1Q6ZVC0 841 aa10.39□□□□□ -0.75
VSIG1-201ENST00000217957 CHCHD4Q8N4Q1 142 aa10.39□□□□□ -0.75
VSIG1-201ENST00000217957 ENAHQ8N8S7 591 aaPredicted RBP10.39□□□□□ -0.75
VSIG1-201ENST00000217957 IFT122Q9HBG6 1241 aa10.39□□□□□ -0.75
VSIG1-201ENST00000217957 CFDP1Q9UEE9 299 aaPredicted RBP10.39□□□□□ -0.75
VSIG1-201ENST00000217957 DMTF1Q9Y222 760 aa10.39□□□□□ -0.75
VSIG1-201ENST00000217957 MYO3AQ8NEV4 1616 aa10.39□□□□□ -0.75
VSIG1-201ENST00000217957 PDGFAP04085 211 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 ZBTB46Q86UZ6 589 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 OSGEPQ9NPF4 335 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 RAB3GAP2Q9H2M9 1393 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 DISP1Q96F81 1524 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 NWD1Q149M9 1564 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 PTPRGP23470 1445 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 GABRDO14764 452 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 IGHDP01880 384 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 PERM1Q5SV97 790 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 PPHLN1Q8NEY8 458 aaKnown RBP10.38□□□□□ -0.75
VSIG1-201ENST00000217957 FBXO27Q8NI29 283 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 PLCB1Q9NQ66 1216 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 VPS45Q9NRW7 570 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 FAM13BQ9NYF5 915 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 GTF2A1LQ9UNN4 478 aa10.38□□□□□ -0.75
VSIG1-201ENST00000217957 TRMT2BQ96GJ1 504 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms