RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 KCNH3Q9ULD8 1083 aa14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 AKNAD1Q5T1N1 836 aa14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 STOX1Q6ZVD7 989 aa14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 IFNL3Q8IZI9 196 aa14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 TTLL11Q8NHH1 800 aa14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 RCOR1Q9UKL0 485 aa14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 ARHGAP29Q52LW3 1261 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 GOLGA6L1Q8N7Z2 621 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 PGBD1Q96JS3 809 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 KIAA1468Q9P260 1216 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 WWC3Q9ULE0 1092 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 PATL2C9JE40 543 aaKnown RBP14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 KIF5BP33176 963 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 STX17P56962 302 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 KANK3Q6NY19 840 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 MYRIPQ8NFW9 859 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 SEC31BQ9NQW1 1179 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 ZNF335Q9H4Z2 1342 aaPredicted RBP14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 NAP1L1P55209 391 aaKnown RBP14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 MYL5Q02045 173 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 GPS2Q13227 327 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 SCARF1Q14162 830 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 AIFM3Q96NN9 605 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 MCM9Q9NXL9 1143 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 DNAI1Q9UI46 699 aa14.16□□□□□ -0.14
TM9SF4-201ENST00000217315 PXDNQ92626 1479 aa14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 SSBP05455 408 aaKnown RBP eCLIP14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 PFKFB1P16118 471 aa14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 SDR42E1Q8WUS8 393 aa14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 C8orf37Q96NL8 207 aa14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 V9GY48 417 aaPredicted RBP14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 UTYO14607 1347 aa14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 RFC4P35249 363 aa14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 RFX5P48382 616 aaPredicted RBP14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 TERF1P54274 439 aa14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 POLR2DO15514 142 aaKnown RBP14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 ADD2P35612 726 aa14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 MCAMP43121 646 aa14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 GYG1P46976 350 aa14.15□□□□□ -0.14
TM9SF4-201ENST00000217315 C6orf229H3BNL8 230 aa14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 UBE3CQ15386 1083 aa14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 RILPL1Q5EBL4 403 aa14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 APOA5Q6Q788 366 aa14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 C11orf57Q6ZUT1 292 aaPredicted RBP14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 UBA7P41226 1012 aa14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 RPGRQ92834 1020 aaKnown RBP14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 TFCP2L1Q9NZI6 479 aa14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 ZNF609O15014 1411 aa14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 BTBD18B2RXH4 712 aa14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 DEXIO95424 95 aa14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 GNG11P61952 73 aa14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 ZHX3Q9H4I2 956 aa14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 ZNF287Q9HBT7 754 aa14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 ZNHIT6Q9NWK9 470 aaKnown RBP14.14□□□□□ -0.15
TM9SF4-201ENST00000217315 BAG3O95817 575 aa14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 EIF5P55010 431 aaKnown RBP14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 TSGA10IPQ3SY00 556 aa14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 TEX35Q5T0J7 233 aa14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 TPTE2Q6XPS3 522 aa14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 CLIC6Q96NY7 704 aa14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 TNS3Q68CZ2 1445 aa14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 MED23Q9ULK4 1368 aa14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 ZNF174Q15697 407 aa14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 XPO4Q9C0E2 1151 aaKnown RBP14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 PIH1D3Q9NQM4 214 aaKnown RBP14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 RTEL1Q9NZ71 1219 aa14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 SEC63Q9UGP8 760 aaKnown RBP14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 FANCCQ00597 558 aa14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 ZMYM6O95789 1325 aa14.13□□□□□ -0.15
TM9SF4-201ENST00000217315 IL6STP40189 918 aaPredicted RBP14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 PNOCQ13519 176 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 SPTY2D1Q68D10 685 aaPredicted RBP14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 TDRD7Q8NHU6 1098 aaKnown RBP14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 ISCA1Q9BUE6 129 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 LOC102724428A0A0B4J2F2 783 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 N4BP3O15049 544 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 PRKAB2O43741 272 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 KRT2P35908 639 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 SIK1P57059 783 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 SYT10Q6XYQ8 523 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 ZSCAN29Q8IWY8 852 aaPredicted RBP14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 LINC00301Q8NCQ3 95 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 CAGE1Q8TC20 777 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 RTL9Q8NET4 1388 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 A0A0G2JLW4 131 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 VWA3AA6NCI4 1184 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 GNPATO15228 680 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 CUTAO60888 179 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 MCM7P33993 719 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 RBM5P52756 815 aaKnown RBP eCLIP14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 KCNQ4P56696 695 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 NLRP12P59046 1061 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 USPL1Q5W0Q7 1092 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 CCDC70Q6NSX1 233 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 AK7Q96M32 723 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 NUP88Q99567 741 aaPredicted RBP14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 ZSWIM4Q9H7M6 989 aa14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 AATFQ9NY61 560 aaKnown RBP eCLIP14.12□□□□□ -0.15
TM9SF4-201ENST00000217315 VPS54Q9P1Q0 977 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms