RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 AK9Q5TCS8 1911 aa24.35■■□□□ 1.49
RHBDD3-201ENST00000216085 SDSP20132 328 aa24.34■■□□□ 1.49
RHBDD3-201ENST00000216085 APOBEC3HQ6NTF7 200 aaKnown RBP24.34■■□□□ 1.49
RHBDD3-201ENST00000216085 PRMT6Q96LA8 375 aaPredicted RBP24.34■■□□□ 1.49
RHBDD3-201ENST00000216085 APPBP2Q92624 585 aa24.34■■□□□ 1.49
RHBDD3-201ENST00000216085 DCPSQ96C86 337 aaKnown RBP24.34■■□□□ 1.49
RHBDD3-201ENST00000216085 AATFQ9NY61 560 aaKnown RBP eCLIP24.34■■□□□ 1.49
RHBDD3-201ENST00000216085 ADAMTSL1Q8N6G6 1762 aa24.33■■□□□ 1.49
RHBDD3-201ENST00000216085 HIRAP54198 1017 aaPredicted RBP24.33■■□□□ 1.49
RHBDD3-201ENST00000216085 TNFAIP1Q13829 316 aa24.33■■□□□ 1.49
RHBDD3-201ENST00000216085 APOBEC3FQ8IUX4 373 aaKnown RBP24.33■■□□□ 1.49
RHBDD3-201ENST00000216085 DIAPH3Q9NSV4 1193 aa24.33■■□□□ 1.49
RHBDD3-201ENST00000216085 GGA3Q9NZ52 723 aa24.33■■□□□ 1.49
RHBDD3-201ENST00000216085 PITPNM2Q9BZ72 1349 aa24.32■■□□□ 1.48
RHBDD3-201ENST00000216085 MAGEB6P1A0A0J9YX57 407 aa24.32■■□□□ 1.48
RHBDD3-201ENST00000216085 TCRBV5S4A2TA0A5A2 114 aa24.32■■□□□ 1.48
RHBDD3-201ENST00000216085 TDRD3Q9H7E2 651 aaKnown RBP24.32■■□□□ 1.48
RHBDD3-201ENST00000216085 VEZTQ9HBM0 779 aa24.32■■□□□ 1.48
RHBDD3-201ENST00000216085 USP40Q9NVE5 1235 aa24.32■■□□□ 1.48
RHBDD3-201ENST00000216085 PCDHAC2Q9Y5I4 1007 aa24.32■■□□□ 1.48
RHBDD3-201ENST00000216085 SPDYE2Q495Y8 402 aa24.31■■□□□ 1.48
RHBDD3-201ENST00000216085 ANGEL2Q5VTE6 544 aaKnown RBP24.31■■□□□ 1.48
RHBDD3-201ENST00000216085 ADGRA1Q86SQ6 560 aa24.31■■□□□ 1.48
RHBDD3-201ENST00000216085 MIGA1Q8NAN2 632 aa24.31■■□□□ 1.48
RHBDD3-201ENST00000216085 AIDAQ96BJ3 306 aa24.31■■□□□ 1.48
RHBDD3-201ENST00000216085 ECM29Q5VYK3 1845 aa24.31■■□□□ 1.48
RHBDD3-201ENST00000216085 PPP4CP60510 307 aa24.31■■□□□ 1.48
RHBDD3-201ENST00000216085 ZNF70Q9UC06 446 aaPredicted RBP24.31■■□□□ 1.48
RHBDD3-201ENST00000216085 CLRN2A0PK11 232 aa24.3■■□□□ 1.48
RHBDD3-201ENST00000216085 TNNI2P48788 182 aa24.3■■□□□ 1.48
RHBDD3-201ENST00000216085 CDC42EP5Q6NZY7 148 aa24.3■■□□□ 1.48
RHBDD3-201ENST00000216085 KIF3CO14782 793 aa24.29■■□□□ 1.48
RHBDD3-201ENST00000216085 SULF1Q8IWU6 871 aa24.29■■□□□ 1.48
RHBDD3-201ENST00000216085 PGAP2Q9UHJ9 254 aa24.29■■□□□ 1.48
RHBDD3-201ENST00000216085 ZMYM1Q5SVZ6 1142 aa24.28■■□□□ 1.48
RHBDD3-201ENST00000216085 FKBP1CQ5VVH2 108 aa24.28■■□□□ 1.48
RHBDD3-201ENST00000216085 CASC1Q6TDU7 716 aa24.28■■□□□ 1.48
RHBDD3-201ENST00000216085 TEX11Q8IYF3 940 aa24.28■■□□□ 1.48
RHBDD3-201ENST00000216085 CRNKL1Q9BZJ0 848 aaKnown RBP24.28■■□□□ 1.48
RHBDD3-201ENST00000216085 HELLSQ9NRZ9 838 aa24.28■■□□□ 1.48
RHBDD3-201ENST00000216085 MBD4O95243 580 aa24.27■■□□□ 1.48
RHBDD3-201ENST00000216085 CHADLQ6NUI6 762 aa24.27■■□□□ 1.48
RHBDD3-201ENST00000216085 RUFY2Q8WXA3 655 aa24.27■■□□□ 1.48
RHBDD3-201ENST00000216085 TOMM70O94826 608 aa24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 MFAP1P55081 439 aaKnown RBP24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 RIOK1Q9BRS2 568 aaKnown RBP24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 PUS7LQ9H0K6 701 aaKnown RBP24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 ASTN2O75129 1339 aaPredicted RBP24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 POTEIP0CG38 1075 aa24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 POTEJP0CG39 1038 aa24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 RHBDL3P58872 404 aa24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 DYNLL1P63167 89 aaKnown RBP24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 CDC37L1Q7L3B6 337 aa24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 KRT26Q7Z3Y9 468 aa24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 SMC1BQ8NDV3 1235 aa24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 SH3RF3Q8TEJ3 882 aaPredicted RBP24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 DDRGK1Q96HY6 314 aa24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 PPP2R3BQ9Y5P8 575 aa24.26■■□□□ 1.47
RHBDD3-201ENST00000216085 USP5P45974 858 aa24.25■■□□□ 1.47
RHBDD3-201ENST00000216085 SLFNL1Q499Z3 407 aa24.25■■□□□ 1.47
RHBDD3-201ENST00000216085 OSBP2Q969R2 916 aa24.25■■□□□ 1.47
RHBDD3-201ENST00000216085 IDI2Q9BXS1 227 aa24.25■■□□□ 1.47
RHBDD3-201ENST00000216085 TCP10L2B9ZVM9 353 aa24.24■■□□□ 1.47
RHBDD3-201ENST00000216085 CHGBP05060 677 aa24.24■■□□□ 1.47
RHBDD3-201ENST00000216085 GNAT2P19087 354 aa24.24■■□□□ 1.47
RHBDD3-201ENST00000216085 NMIQ13287 307 aaPredicted RBP24.24■■□□□ 1.47
RHBDD3-201ENST00000216085 MCMDC2Q4G0Z9 681 aa24.24■■□□□ 1.47
RHBDD3-201ENST00000216085 FAM83AQ86UY5 434 aa24.24■■□□□ 1.47
RHBDD3-201ENST00000216085 RBM46Q8TBY0 533 aaKnown RBP24.24■■□□□ 1.47
RHBDD3-201ENST00000216085 ARMT1Q9H993 441 aa24.24■■□□□ 1.47
RHBDD3-201ENST00000216085 GPAA1O43292 621 aa24.24■■□□□ 1.47
RHBDD3-201ENST00000216085 CACNB3P54284 484 aa24.24■■□□□ 1.47
RHBDD3-201ENST00000216085 MAP1SQ66K74 1059 aaPredicted RBP24.24■■□□□ 1.47
RHBDD3-201ENST00000216085 CWC27Q6UX04 472 aaKnown RBP24.24■■□□□ 1.47
RHBDD3-201ENST00000216085 LCORLQ8N3X6 602 aa24.24■■□□□ 1.47
RHBDD3-201ENST00000216085 ENTPD3O75355 529 aa24.23■■□□□ 1.47
RHBDD3-201ENST00000216085 CDC45O75419 566 aa24.23■■□□□ 1.47
RHBDD3-201ENST00000216085 NPM3O75607 178 aaKnown RBP24.23■■□□□ 1.47
RHBDD3-201ENST00000216085 PICALMQ13492 652 aa24.23■■□□□ 1.47
RHBDD3-201ENST00000216085 FAM227BQ96M60 508 aa24.23■■□□□ 1.47
RHBDD3-201ENST00000216085 RAD50Q92878 1312 aa24.23■■□□□ 1.47
RHBDD3-201ENST00000216085 A0A0D9SFI3 127 aa24.22■■□□□ 1.47
RHBDD3-201ENST00000216085 M0R2C6 588 aa24.22■■□□□ 1.47
RHBDD3-201ENST00000216085 WDHD1O75717 1129 aaPredicted RBP24.22■■□□□ 1.47
RHBDD3-201ENST00000216085 DEFB129Q9H1M3 183 aa24.22■■□□□ 1.47
RHBDD3-201ENST00000216085 CHMLP26374 656 aa24.21■■□□□ 1.47
RHBDD3-201ENST00000216085 TGFBRAP1Q8WUH2 860 aa24.21■■□□□ 1.47
RHBDD3-201ENST00000216085 SLC4A4Q9Y6R1 1079 aa24.21■■□□□ 1.47
RHBDD3-201ENST00000216085 NFIAQ12857 509 aa24.21■■□□□ 1.47
RHBDD3-201ENST00000216085 RASA3Q14644 834 aa24.21■■□□□ 1.47
RHBDD3-201ENST00000216085 FAM151AQ8WW52 585 aa24.21■■□□□ 1.47
RHBDD3-201ENST00000216085 STRBPQ96SI9 672 aaKnown RBP24.21■■□□□ 1.47
RHBDD3-201ENST00000216085 SEC62Q99442 399 aaKnown RBP24.21■■□□□ 1.47
RHBDD3-201ENST00000216085 TCP10Q12799 353 aa24.2■■□□□ 1.46
RHBDD3-201ENST00000216085 GLIS2Q9BZE0 524 aaPredicted RBP24.2■■□□□ 1.46
RHBDD3-201ENST00000216085 ATP8A2Q9NTI2 1148 aa24.2■■□□□ 1.46
RHBDD3-201ENST00000216085 CCDC171Q6TFL3 1326 aa24.2■■□□□ 1.46
RHBDD3-201ENST00000216085 FSTL1Q12841 308 aa24.19■■□□□ 1.46
RHBDD3-201ENST00000216085 USP48Q86UV5 1035 aa24.19■■□□□ 1.46
RHBDD3-201ENST00000216085 AMOTL1Q8IY63 956 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms