RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 CHAF1AQ13111 956 aaPredicted RBP21.88■■□□□ 1.09
CTSA-201ENST00000191018 CNNM2Q9H8M5 875 aa21.88■■□□□ 1.09
CTSA-201ENST00000191018 SH2B2O14492 632 aaPredicted RBP21.87■■□□□ 1.09
CTSA-201ENST00000191018 TMC4Q7Z404 712 aa21.87■■□□□ 1.09
CTSA-201ENST00000191018 TMEM87BQ96K49 555 aa21.87■■□□□ 1.09
CTSA-201ENST00000191018 NCOA5Q9HCD5 579 aaKnown RBP21.87■■□□□ 1.09
CTSA-201ENST00000191018 ANGEL1Q9UNK9 670 aaKnown RBP21.87■■□□□ 1.09
CTSA-201ENST00000191018 NSFL1CQ9UNZ2 370 aaKnown RBP21.87■■□□□ 1.09
CTSA-201ENST00000191018 HPS5Q9UPZ3 1129 aa21.87■■□□□ 1.09
CTSA-201ENST00000191018 BAZ2AQ9UIF9 1905 aaKnown RBP21.87■■□□□ 1.09
CTSA-201ENST00000191018 KLF18A0A0U1RQI7 1052 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 PTPDC1A2A3K4 754 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 DYNLL1P63167 89 aaKnown RBP21.86■■□□□ 1.09
CTSA-201ENST00000191018 POTEAQ6S8J7 498 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 ZNF804AQ7Z570 1209 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 SDR42E1Q8WUS8 393 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 ANAPC4Q9UJX5 808 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 CNPY2Q9Y2B0 182 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 DUOX1Q9NRD9 1551 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 MBD3O95983 291 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 SPTY2D1Q68D10 685 aaPredicted RBP21.86■■□□□ 1.09
CTSA-201ENST00000191018 USP48Q86UV5 1035 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 WDR66Q8TBY9 1149 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 DDX11Q96FC9 970 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 GDPD2Q9HCC8 539 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 INCENPQ9NQS7 918 aa21.86■■□□□ 1.09
CTSA-201ENST00000191018 COL11A2P13942 1736 aaPredicted RBP21.85■■□□□ 1.09
CTSA-201ENST00000191018 UFL1O94874 794 aa21.85■■□□□ 1.09
CTSA-201ENST00000191018 GIMAP6Q6P9H5 292 aa21.85■■□□□ 1.09
CTSA-201ENST00000191018 MFSD6Q6ZSS7 791 aa21.85■■□□□ 1.09
CTSA-201ENST00000191018 IGDCC4Q8TDY8 1250 aa21.85■■□□□ 1.09
CTSA-201ENST00000191018 KRT23Q9C075 422 aa21.85■■□□□ 1.09
CTSA-201ENST00000191018 GGA1Q9UJY5 639 aa21.85■■□□□ 1.09
CTSA-201ENST00000191018 PPARAQ07869 468 aa21.84■■□□□ 1.09
CTSA-201ENST00000191018 FAM184AQ8NB25 1140 aa21.84■■□□□ 1.09
CTSA-201ENST00000191018 GPR101Q96P66 508 aaPredicted RBP21.84■■□□□ 1.09
CTSA-201ENST00000191018 ZSWIM5Q9P217 1185 aa21.84■■□□□ 1.09
CTSA-201ENST00000191018 ISY1Q9ULR0 285 aaKnown RBP21.84■■□□□ 1.09
CTSA-201ENST00000191018 NAP1L2Q9ULW6 460 aaPredicted RBP21.84■■□□□ 1.09
CTSA-201ENST00000191018 GOLGA8BA8MQT2 603 aa21.83■■□□□ 1.09
CTSA-201ENST00000191018 SRGNP10124 158 aa21.83■■□□□ 1.09
CTSA-201ENST00000191018 DNM1Q05193 864 aaKnown RBP21.83■■□□□ 1.09
CTSA-201ENST00000191018 LAMB1P07942 1786 aa21.83■■□□□ 1.09
CTSA-201ENST00000191018 QSER1Q2KHR3 1735 aa21.83■■□□□ 1.09
CTSA-201ENST00000191018 IL1R1P14778 569 aa21.83■■□□□ 1.08
CTSA-201ENST00000191018 LIFRP42702 1097 aa21.83■■□□□ 1.08
CTSA-201ENST00000191018 CAVIN1Q6NZI2 390 aaKnown RBP21.83■■□□□ 1.08
CTSA-201ENST00000191018 SGMS1Q86VZ5 419 aa21.83■■□□□ 1.08
CTSA-201ENST00000191018 SP8Q8IXZ3 490 aa21.83■■□□□ 1.08
CTSA-201ENST00000191018 TBC1D16Q8TBP0 767 aa21.83■■□□□ 1.08
CTSA-201ENST00000191018 MTA3Q9BTC8 594 aa21.83■■□□□ 1.08
CTSA-201ENST00000191018 RNF41Q9H4P4 317 aaPredicted RBP21.83■■□□□ 1.08
CTSA-201ENST00000191018 CD209Q9NNX6 404 aa21.83■■□□□ 1.08
CTSA-201ENST00000191018 KIF3AQ9Y496 699 aa21.83■■□□□ 1.08
CTSA-201ENST00000191018 MYH15Q9Y2K3 1946 aa21.82■■□□□ 1.08
CTSA-201ENST00000191018 GOLGA6L3A6NEY3 463 aa21.82■■□□□ 1.08
CTSA-201ENST00000191018 DHX16O60231 1041 aaKnown RBP21.82■■□□□ 1.08
CTSA-201ENST00000191018 KDM4AO75164 1064 aa21.82■■□□□ 1.08
CTSA-201ENST00000191018 MMP10P09238 476 aa21.82■■□□□ 1.08
CTSA-201ENST00000191018 NCLP19338 710 aaKnown RBP21.82■■□□□ 1.08
CTSA-201ENST00000191018 LY9Q9HBG7 655 aa21.82■■□□□ 1.08
CTSA-201ENST00000191018 POLLQ9UGP5 575 aa21.82■■□□□ 1.08
CTSA-201ENST00000191018 JAG2Q9Y219 1238 aa21.82■■□□□ 1.08
CTSA-201ENST00000191018 PPEF1O14829 653 aaPredicted RBP21.81■■□□□ 1.08
CTSA-201ENST00000191018 GADD45BO75293 160 aaPredicted RBP21.81■■□□□ 1.08
CTSA-201ENST00000191018 FDPSP14324 419 aaKnown RBP21.81■■□□□ 1.08
CTSA-201ENST00000191018 L1TD1Q5T7N2 865 aaKnown RBP21.81■■□□□ 1.08
CTSA-201ENST00000191018 FERMT3Q86UX7 667 aa21.81■■□□□ 1.08
CTSA-201ENST00000191018 NPR1P16066 1061 aa21.81■■□□□ 1.08
CTSA-201ENST00000191018 APOA5Q6Q788 366 aa21.81■■□□□ 1.08
CTSA-201ENST00000191018 AATFQ9NY61 560 aaKnown RBP eCLIP21.81■■□□□ 1.08
CTSA-201ENST00000191018 ATP6V0A2Q9Y487 856 aa21.81■■□□□ 1.08
CTSA-201ENST00000191018 PARP3Q9Y6F1 533 aa21.81■■□□□ 1.08
CTSA-201ENST00000191018 LDHBP07195 334 aaKnown RBP21.8■■□□□ 1.08
CTSA-201ENST00000191018 RESTQ13127 1097 aa21.8■■□□□ 1.08
CTSA-201ENST00000191018 DZIP1Q86YF9 867 aaKnown RBP21.8■■□□□ 1.08
CTSA-201ENST00000191018 SENP2Q9HC62 589 aa21.8■■□□□ 1.08
CTSA-201ENST00000191018 PDE6BP35913 854 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 ZNF445P59923 1031 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 CSPP1Q1MSJ5 1256 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 CRNKL1Q9BZJ0 848 aaKnown RBP21.79■■□□□ 1.08
CTSA-201ENST00000191018 TMEM63CQ9P1W3 806 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 MYH2Q9UKX2 1941 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 MINDY4BA8MYZ0 360 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 H3BQV1 296 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 FIBPO43427 364 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 FGRP09769 529 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 ZSCAN23Q3MJ62 389 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 TMEM67Q5HYA8 995 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 IFFO2Q5TF58 517 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 GAS2L3Q86XJ1 694 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 CAMKK2Q96RR4 588 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 ZSCAN16Q9H4T2 348 aaPredicted RBP21.79■■□□□ 1.08
CTSA-201ENST00000191018 ATP8A2Q9NTI2 1148 aa21.79■■□□□ 1.08
CTSA-201ENST00000191018 KRT85P78386 507 aa21.78■■□□□ 1.08
CTSA-201ENST00000191018 CTR9Q6PD62 1173 aa21.78■■□□□ 1.08
CTSA-201ENST00000191018 DCP1AQ9NPI6 582 aaPredicted RBP21.78■■□□□ 1.08
CTSA-201ENST00000191018 RBM27Q9P2N5 1060 aaKnown RBP21.78■■□□□ 1.08
CTSA-201ENST00000191018 NID2Q14112 1375 aa21.78■■□□□ 1.08
CTSA-201ENST00000191018 IFIT3O14879 490 aaKnown RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms