RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 C19orf44Q9H6X5 657 aa17.03■□□□□ 0.32
TMEM38A-201ENST00000187762 HNRNPH1P31943 449 aaKnown RBP17.02■□□□□ 0.32
TMEM38A-201ENST00000187762 ENGASEQ8NFI3 743 aa17.02■□□□□ 0.32
TMEM38A-201ENST00000187762 FAM107BQ9H098 131 aa17.02■□□□□ 0.32
TMEM38A-201ENST00000187762 COL18A1P39060 1754 aa17.02■□□□□ 0.32
TMEM38A-201ENST00000187762 JCADQ9P266 1359 aa17.02■□□□□ 0.32
TMEM38A-201ENST00000187762 A0A087WZG4 1122 aa17.02■□□□□ 0.32
TMEM38A-201ENST00000187762 USP5P45974 858 aa17.02■□□□□ 0.32
TMEM38A-201ENST00000187762 DHX58Q96C10 678 aa17.02■□□□□ 0.32
TMEM38A-201ENST00000187762 L1RE1Q9UN81 338 aa17.02■□□□□ 0.32
TMEM38A-201ENST00000187762 PPP2R2CQ9Y2T4 447 aa17.02■□□□□ 0.32
TMEM38A-201ENST00000187762 ATP5JP18859 108 aa17.01■□□□□ 0.31
TMEM38A-201ENST00000187762 FAM160A1Q05DH4 1040 aa17.01■□□□□ 0.31
TMEM38A-201ENST00000187762 KCNV1Q6PIU1 500 aa17.01■□□□□ 0.31
TMEM38A-201ENST00000187762 KIFC2Q96AC6 838 aa17.01■□□□□ 0.31
TMEM38A-201ENST00000187762 ANKZF1Q9H8Y5 726 aa17.01■□□□□ 0.31
TMEM38A-201ENST00000187762 ZNF609O15014 1411 aa17.01■□□□□ 0.31
TMEM38A-201ENST00000187762 HSP90B2PQ58FF3 399 aa17.01■□□□□ 0.31
TMEM38A-201ENST00000187762 SAMD1Q6SPF0 538 aaPredicted RBP17.01■□□□□ 0.31
TMEM38A-201ENST00000187762 DDX46Q7L014 1031 aaKnown RBP17.01■□□□□ 0.31
TMEM38A-201ENST00000187762 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
TMEM38A-201ENST00000187762 FMNL2Q96PY5 1086 aa17.01■□□□□ 0.31
TMEM38A-201ENST00000187762 BPIFA3Q9BQP9 254 aa17.01■□□□□ 0.31
TMEM38A-201ENST00000187762 PHACTR2O75167 634 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 USP8P40818 1118 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 LIG3P49916 1009 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 DPCR1Q3MIW9 517 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 BRF1Q92994 677 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 CCDC102AQ96A19 550 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 SUGCTQ9HAC7 445 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 RAB21Q9UL25 225 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 ERLIN1O75477 346 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 DCAF5Q96JK2 942 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 ZSWIM4Q9H7M6 989 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 FAM204AQ9H8W3 233 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 ABCB6Q9NP58 842 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 RCOR1Q9UKL0 485 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 JAK2O60674 1132 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 CHMP4BP1P59074 171 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 TRDNQ13061 729 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 WWC2Q6AWC2 1192 aa17■□□□□ 0.31
TMEM38A-201ENST00000187762 ADD1P35611 737 aaKnown RBP16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 CABP4P57796 275 aa16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 FANCCQ00597 558 aa16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 ANKRD1Q15327 319 aa16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 RABL6Q3YEC7 729 aaPredicted RBP16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 ISM2Q6H9L7 571 aa16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 PNKPQ96T60 521 aa16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 LRRC2Q9BYS8 371 aa16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 FTOQ9C0B1 505 aaKnown RBP eCLIP16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 GOLGA6L9A6NEM1 432 aa16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 POTEB2H3BUK9 544 aa16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 EXOC5O00471 708 aa16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 HSP90AB3PQ58FF7 597 aa16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 LMBR1LQ6UX01 489 aa16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 FSIP1Q8NA03 581 aa16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 HMG20BQ9P0W2 317 aa16.99■□□□□ 0.31
TMEM38A-201ENST00000187762 MST1RQ04912 1400 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 H3BQV1 296 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 GOLGA8FQ08AF8 430 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 GOLGA8DPQ0D2H9 430 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 IFFO2Q5TF58 517 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 FBXW10Q5XX13 1052 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 MSANTD4Q8NCY6 345 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 GLI3P10071 1580 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 ARHGAP6O43182 974 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 ATF3P18847 181 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 CASP7P55210 303 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 CASP8Q14790 479 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 NCAPHQ15003 741 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 USPL1Q5W0Q7 1092 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 SRGAP1Q7Z6B7 1085 aa16.98■□□□□ 0.31
TMEM38A-201ENST00000187762 CYP21A2P08686 494 aa16.97■□□□□ 0.31
TMEM38A-201ENST00000187762 NEK1Q96PY6 1258 aa16.97■□□□□ 0.31
TMEM38A-201ENST00000187762 SKIDA1Q1XH10 827 aa16.97■□□□□ 0.31
TMEM38A-201ENST00000187762 LRCH2Q5VUJ6 765 aa16.97■□□□□ 0.31
TMEM38A-201ENST00000187762 Q6ZUG5 572 aa16.97■□□□□ 0.31
TMEM38A-201ENST00000187762 TMEM139Q8IV31 216 aa16.97■□□□□ 0.31
TMEM38A-201ENST00000187762 CLIC6Q96NY7 704 aa16.97■□□□□ 0.31
TMEM38A-201ENST00000187762 ALDH8A1Q9H2A2 487 aaPredicted RBP16.97■□□□□ 0.31
TMEM38A-201ENST00000187762 LAMA4Q16363 1823 aa16.96■□□□□ 0.31
TMEM38A-201ENST00000187762 PKD1L3Q7Z443 1732 aa16.96■□□□□ 0.31
TMEM38A-201ENST00000187762 NBPF26B4DH59 902 aa16.96■□□□□ 0.31
TMEM38A-201ENST00000187762 CUTAO60888 179 aa16.96■□□□□ 0.31
TMEM38A-201ENST00000187762 LMOD1P29536 600 aaPredicted RBP16.96■□□□□ 0.31
TMEM38A-201ENST00000187762 NBPF14Q5TI25 921 aa16.96■□□□□ 0.31
TMEM38A-201ENST00000187762 NBPF10Q6P3W6 841 aaKnown RBP16.96■□□□□ 0.31
TMEM38A-201ENST00000187762 NBPF15Q8N660 670 aa16.96■□□□□ 0.31
TMEM38A-201ENST00000187762 SDF4Q9BRK5 362 aa16.96■□□□□ 0.31
TMEM38A-201ENST00000187762 PPP1R12AO14974 1030 aaPredicted RBP16.96■□□□□ 0.3
TMEM38A-201ENST00000187762 HSP90B1P14625 803 aaKnown RBP16.96■□□□□ 0.3
TMEM38A-201ENST00000187762 SCP2P22307 547 aa16.96■□□□□ 0.3
TMEM38A-201ENST00000187762 TTLL7Q6ZT98 887 aa16.96■□□□□ 0.3
TMEM38A-201ENST00000187762 PLBD2Q8NHP8 589 aa16.96■□□□□ 0.3
TMEM38A-201ENST00000187762 AFAP1L1Q8TED9 768 aa16.96■□□□□ 0.3
TMEM38A-201ENST00000187762 NEUROD6Q96NK8 337 aa16.96■□□□□ 0.3
TMEM38A-201ENST00000187762 HAUS7Q99871 368 aa16.96■□□□□ 0.3
TMEM38A-201ENST00000187762 KIAA1468Q9P260 1216 aa16.96■□□□□ 0.3
TMEM38A-201ENST00000187762 LAMB4A4D0S4 1761 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms