RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 TUBE1Q9UJT0 475 aa23.4■■□□□ 1.34
RCN1-201ENST00000054950 HPSEQ9Y251 543 aa23.4■■□□□ 1.34
RCN1-201ENST00000054950 CPDO75976 1380 aa23.39■■□□□ 1.34
RCN1-201ENST00000054950 ERICH4A6NGS2 130 aa23.39■■□□□ 1.34
RCN1-201ENST00000054950 B4E1Z4 1266 aa23.39■■□□□ 1.34
RCN1-201ENST00000054950 IKBKBO14920 756 aa23.39■■□□□ 1.34
RCN1-201ENST00000054950 APPP05067 770 aa23.39■■□□□ 1.34
RCN1-201ENST00000054950 ETF1P62495 437 aaKnown RBP23.39■■□□□ 1.34
RCN1-201ENST00000054950 PDE4BQ07343 736 aa23.39■■□□□ 1.34
RCN1-201ENST00000054950 LONRF3Q496Y0 759 aa23.39■■□□□ 1.34
RCN1-201ENST00000054950 TRIM65Q6PJ69 517 aa23.39■■□□□ 1.34
RCN1-201ENST00000054950 ZFYP08048 801 aaPredicted RBP23.39■■□□□ 1.33
RCN1-201ENST00000054950 MYL5Q02045 173 aa23.39■■□□□ 1.33
RCN1-201ENST00000054950 ANGEL1Q9UNK9 670 aaKnown RBP23.38■■□□□ 1.33
RCN1-201ENST00000054950 MYO5AQ9Y4I1 1855 aaKnown RBP23.38■■□□□ 1.33
RCN1-201ENST00000054950 ZMYM6O95789 1325 aa23.38■■□□□ 1.33
RCN1-201ENST00000054950 PKD1L3Q7Z443 1732 aa23.38■■□□□ 1.33
RCN1-201ENST00000054950 MAP3K14Q99558 947 aa23.38■■□□□ 1.33
RCN1-201ENST00000054950 INTS13Q9NVM9 706 aa23.38■■□□□ 1.33
RCN1-201ENST00000054950 FHOD1Q9Y613 1164 aa23.38■■□□□ 1.33
RCN1-201ENST00000054950 TMEM94Q12767 1356 aa23.37■■□□□ 1.33
RCN1-201ENST00000054950 NRDCO43847 1150 aa23.37■■□□□ 1.33
RCN1-201ENST00000054950 URI1O94763 535 aaPredicted RBP23.37■■□□□ 1.33
RCN1-201ENST00000054950 BMP6P22004 513 aa23.37■■□□□ 1.33
RCN1-201ENST00000054950 RANBP6O60518 1105 aaKnown RBP23.37■■□□□ 1.33
RCN1-201ENST00000054950 APOA5Q6Q788 366 aa23.37■■□□□ 1.33
RCN1-201ENST00000054950 ATG3Q9NT62 314 aa23.37■■□□□ 1.33
RCN1-201ENST00000054950 SH2B2O14492 632 aaPredicted RBP23.36■■□□□ 1.33
RCN1-201ENST00000054950 TRDNQ13061 729 aa23.36■■□□□ 1.33
RCN1-201ENST00000054950 LRRFIP1Q32MZ4 808 aaKnown RBP23.36■■□□□ 1.33
RCN1-201ENST00000054950 SLC9C2Q5TAH2 1124 aa23.36■■□□□ 1.33
RCN1-201ENST00000054950 REXO1L1PQ8IX06 675 aa23.36■■□□□ 1.33
RCN1-201ENST00000054950 AKAP2Q9Y2D5 859 aa23.36■■□□□ 1.33
RCN1-201ENST00000054950 PCDHA5Q9Y5H7 936 aa23.36■■□□□ 1.33
RCN1-201ENST00000054950 KCNJ6P48051 423 aa23.36■■□□□ 1.33
RCN1-201ENST00000054950 GRIN1Q05586 938 aa23.36■■□□□ 1.33
RCN1-201ENST00000054950 CARD6Q9BX69 1037 aa23.36■■□□□ 1.33
RCN1-201ENST00000054950 MYH7P12883 1935 aa23.35■■□□□ 1.33
RCN1-201ENST00000054950 ECM29Q5VYK3 1845 aa23.35■■□□□ 1.33
RCN1-201ENST00000054950 IDH1O75874 414 aaKnown RBP23.35■■□□□ 1.33
RCN1-201ENST00000054950 VSTM4Q8IW00 320 aa23.35■■□□□ 1.33
RCN1-201ENST00000054950 SEC31AO94979 1220 aaKnown RBP23.35■■□□□ 1.33
RCN1-201ENST00000054950 TOP1P11387 765 aaKnown RBP23.35■■□□□ 1.33
RCN1-201ENST00000054950 RESP18Q5W5W9 173 aa23.35■■□□□ 1.33
RCN1-201ENST00000054950 TICAM2Q86XR7 235 aa23.35■■□□□ 1.33
RCN1-201ENST00000054950 CNNM3Q8NE01 707 aa23.35■■□□□ 1.33
RCN1-201ENST00000054950 TIGD1Q96MW7 591 aa23.35■■□□□ 1.33
RCN1-201ENST00000054950 C19orf44Q9H6X5 657 aa23.35■■□□□ 1.33
RCN1-201ENST00000054950 PIH1D3Q9NQM4 214 aaKnown RBP23.35■■□□□ 1.33
RCN1-201ENST00000054950 ADAMTSL3P82987 1691 aa23.35■■□□□ 1.33
RCN1-201ENST00000054950 ZNF827Q17R98 1081 aa23.34■■□□□ 1.33
RCN1-201ENST00000054950 METTL24Q5JXM2 366 aa23.34■■□□□ 1.33
RCN1-201ENST00000054950 ISCA1Q9BUE6 129 aa23.34■■□□□ 1.33
RCN1-201ENST00000054950 ADD2P35612 726 aa23.34■■□□□ 1.33
RCN1-201ENST00000054950 NFXL1Q6ZNB6 911 aa23.34■■□□□ 1.33
RCN1-201ENST00000054950 RIC1Q4ADV7 1423 aa23.33■■□□□ 1.33
RCN1-201ENST00000054950 KCPQ6ZWJ8 1503 aa23.33■■□□□ 1.33
RCN1-201ENST00000054950 PPP6R2O75170 966 aa23.33■■□□□ 1.33
RCN1-201ENST00000054950 PNMA6AP0CW24 399 aaPredicted RBP23.33■■□□□ 1.33
RCN1-201ENST00000054950 IFIT5Q13325 482 aaKnown RBP23.33■■□□□ 1.33
RCN1-201ENST00000054950 TMEM139Q8IV31 216 aa23.33■■□□□ 1.33
RCN1-201ENST00000054950 TRMT44Q8IYL2 757 aaKnown RBP23.33■■□□□ 1.33
RCN1-201ENST00000054950 UBN2Q6ZU65 1347 aa23.33■■□□□ 1.32
RCN1-201ENST00000054950 PHLPP2Q6ZVD8 1323 aa23.33■■□□□ 1.32
RCN1-201ENST00000054950 VWA3AA6NCI4 1184 aa23.33■■□□□ 1.32
RCN1-201ENST00000054950 KRBA2Q6ZNG9 492 aa23.33■■□□□ 1.32
RCN1-201ENST00000054950 GRAMD1CQ8IYS0 662 aa23.33■■□□□ 1.32
RCN1-201ENST00000054950 PDILTQ8N807 584 aa23.33■■□□□ 1.32
RCN1-201ENST00000054950 UBXN4Q92575 508 aa23.33■■□□□ 1.32
RCN1-201ENST00000054950 FAM217BQ9NTX9 383 aaPredicted RBP23.33■■□□□ 1.32
RCN1-201ENST00000054950 KCNH3Q9ULD8 1083 aa23.33■■□□□ 1.32
RCN1-201ENST00000054950 PRR29P0C7W0 189 aa23.32■■□□□ 1.32
RCN1-201ENST00000054950 GPTP24298 496 aa23.32■■□□□ 1.32
RCN1-201ENST00000054950 GUCY1A2P33402 732 aa23.32■■□□□ 1.32
RCN1-201ENST00000054950 PLA2G4AP47712 749 aa23.32■■□□□ 1.32
RCN1-201ENST00000054950 TCIRG1Q13488 830 aa23.32■■□□□ 1.32
RCN1-201ENST00000054950 BMS1Q14692 1282 aaKnown RBP23.32■■□□□ 1.32
RCN1-201ENST00000054950 NTRK3Q16288 839 aa23.32■■□□□ 1.32
RCN1-201ENST00000054950 OLFM4Q6UX06 510 aa23.32■■□□□ 1.32
RCN1-201ENST00000054950 MNS1Q8NEH6 495 aa23.32■■□□□ 1.32
RCN1-201ENST00000054950 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.32■■□□□ 1.32
RCN1-201ENST00000054950 SLC26A6Q9BXS9 759 aa23.32■■□□□ 1.32
RCN1-201ENST00000054950 PARP3Q9Y6F1 533 aa23.32■■□□□ 1.32
RCN1-201ENST00000054950 ZNF142P52746 1687 aaPredicted RBP23.32■■□□□ 1.32
RCN1-201ENST00000054950 AKAP11Q9UKA4 1901 aa23.32■■□□□ 1.32
RCN1-201ENST00000054950 WWC3Q9ULE0 1092 aa23.32■■□□□ 1.32
RCN1-201ENST00000054950 GOLGA8AA7E2F4 631 aa23.31■■□□□ 1.32
RCN1-201ENST00000054950 ZBTB43O43298 467 aa23.31■■□□□ 1.32
RCN1-201ENST00000054950 CBFA2T2O43439 604 aa23.31■■□□□ 1.32
RCN1-201ENST00000054950 IARSP41252 1262 aaKnown RBP23.31■■□□□ 1.32
RCN1-201ENST00000054950 ADKP55263 362 aaKnown RBP23.31■■□□□ 1.32
RCN1-201ENST00000054950 FMR1Q06787 632 aaKnown RBP eCLIP23.31■■□□□ 1.32
RCN1-201ENST00000054950 CCDC82Q8N4S0 544 aa23.31■■□□□ 1.32
RCN1-201ENST00000054950 ZCRB1Q8TBF4 217 aaKnown RBP23.31■■□□□ 1.32
RCN1-201ENST00000054950 WDR24Q96S15 920 aa23.31■■□□□ 1.32
RCN1-201ENST00000054950 ZNF532Q9HCE3 1301 aa23.31■■□□□ 1.32
RCN1-201ENST00000054950 CMTR1Q8N1G2 835 aaKnown RBP23.31■■□□□ 1.32
RCN1-201ENST00000054950 JMYQ8N9B5 988 aa23.31■■□□□ 1.32
RCN1-201ENST00000054950 GREM2Q9H772 168 aa23.31■■□□□ 1.32
RCN1-201ENST00000054950 KCNJ14Q9UNX9 436 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms