RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 HHIPL2Q6UWX4 724 aa12.2□□□□□ -0.46
CD9-201ENST00000009180 USP50Q70EL3 339 aaPredicted RBP12.2□□□□□ -0.46
CD9-201ENST00000009180 RILPL2Q969X0 211 aa12.2□□□□□ -0.46
CD9-201ENST00000009180 TDRD3Q9H7E2 651 aaKnown RBP12.2□□□□□ -0.46
CD9-201ENST00000009180 GGA3Q9NZ52 723 aa12.2□□□□□ -0.46
CD9-201ENST00000009180 TCRBV5S4A2TA0A5A2 114 aa12.19□□□□□ -0.46
CD9-201ENST00000009180 CACNB3P54284 484 aa12.19□□□□□ -0.46
CD9-201ENST00000009180 DYNLL1P63167 89 aaKnown RBP12.19□□□□□ -0.46
CD9-201ENST00000009180 GSTO1P78417 241 aa12.19□□□□□ -0.46
CD9-201ENST00000009180 HDLBPQ00341 1268 aaKnown RBP12.19□□□□□ -0.46
CD9-201ENST00000009180 ANGEL2Q5VTE6 544 aaKnown RBP12.19□□□□□ -0.46
CD9-201ENST00000009180 APOBEC3HQ6NTF7 200 aaKnown RBP12.19□□□□□ -0.46
CD9-201ENST00000009180 DLK2Q6UY11 383 aa12.19□□□□□ -0.46
CD9-201ENST00000009180 MTMR14Q8NCE2 650 aa12.19□□□□□ -0.46
CD9-201ENST00000009180 EVI5LQ96CN4 794 aa12.19□□□□□ -0.46
CD9-201ENST00000009180 ZDHHC15Q96MV8 337 aa12.19□□□□□ -0.46
CD9-201ENST00000009180 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.19□□□□□ -0.46
CD9-201ENST00000009180 AATFQ9NY61 560 aaKnown RBP eCLIP12.19□□□□□ -0.46
CD9-201ENST00000009180 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
CD9-201ENST00000009180 SDSP20132 328 aa12.18□□□□□ -0.46
CD9-201ENST00000009180 ADD2P35612 726 aa12.18□□□□□ -0.46
CD9-201ENST00000009180 MAP1SQ66K74 1059 aaPredicted RBP12.18□□□□□ -0.46
CD9-201ENST00000009180 CDC42EP5Q6NZY7 148 aa12.18□□□□□ -0.46
CD9-201ENST00000009180 PNMA8AQ86V59 439 aaPredicted RBP12.18□□□□□ -0.46
CD9-201ENST00000009180 CNTROBQ8N137 903 aa12.18□□□□□ -0.46
CD9-201ENST00000009180 VEZTQ9HBM0 779 aa12.18□□□□□ -0.46
CD9-201ENST00000009180 ZNF70Q9UC06 446 aaPredicted RBP12.18□□□□□ -0.46
CD9-201ENST00000009180 MYH2Q9UKX2 1941 aa12.17□□□□□ -0.46
CD9-201ENST00000009180 GPR75-ASB3A0A0A6YYF3 556 aa12.17□□□□□ -0.46
CD9-201ENST00000009180 ADM5C9JUS6 153 aa12.17□□□□□ -0.46
CD9-201ENST00000009180 RNF113AO15541 343 aaKnown RBP12.17□□□□□ -0.46
CD9-201ENST00000009180 LDHCP07864 332 aa12.17□□□□□ -0.46
CD9-201ENST00000009180 MMP14P50281 582 aa12.17□□□□□ -0.46
CD9-201ENST00000009180 RHBDL3P58872 404 aa12.17□□□□□ -0.46
CD9-201ENST00000009180 SPDYE2Q495Y8 402 aa12.17□□□□□ -0.46
CD9-201ENST00000009180 LDHDQ86WU2 507 aa12.17□□□□□ -0.46
CD9-201ENST00000009180 SLF2Q8IX21 1173 aa12.17□□□□□ -0.46
CD9-201ENST00000009180 SH3RF3Q8TEJ3 882 aaPredicted RBP12.17□□□□□ -0.46
CD9-201ENST00000009180 FAM163AQ96GL9 167 aaPredicted RBP12.17□□□□□ -0.46
CD9-201ENST00000009180 SEC62Q99442 399 aaKnown RBP12.17□□□□□ -0.46
CD9-201ENST00000009180 MRIQ9BWK5 157 aa12.17□□□□□ -0.46
CD9-201ENST00000009180 GLIS2Q9BZE0 524 aaPredicted RBP12.17□□□□□ -0.46
CD9-201ENST00000009180 USP40Q9NVE5 1235 aa12.17□□□□□ -0.46
CD9-201ENST00000009180 MYH7P12883 1935 aa12.16□□□□□ -0.46
CD9-201ENST00000009180 TCP10L2B9ZVM9 353 aa12.16□□□□□ -0.46
CD9-201ENST00000009180 M0R2C6 588 aa12.16□□□□□ -0.46
CD9-201ENST00000009180 MBD4O95243 580 aa12.16□□□□□ -0.46
CD9-201ENST00000009180 FMR1Q06787 632 aaKnown RBP eCLIP12.16□□□□□ -0.46
CD9-201ENST00000009180 NFIAQ12857 509 aa12.16□□□□□ -0.46
CD9-201ENST00000009180 ZSCAN25Q6NSZ9 544 aa12.16□□□□□ -0.46
CD9-201ENST00000009180 LCORLQ8N3X6 602 aa12.16□□□□□ -0.46
CD9-201ENST00000009180 FAM227BQ96M60 508 aa12.16□□□□□ -0.46
CD9-201ENST00000009180 PUS7LQ9H0K6 701 aaKnown RBP12.16□□□□□ -0.46
CD9-201ENST00000009180 ARMT1Q9H993 441 aa12.16□□□□□ -0.46
CD9-201ENST00000009180 RFX7Q2KHR2 1363 aa12.16□□□□□ -0.46
CD9-201ENST00000009180 A0A0D9SFI3 127 aa12.15□□□□□ -0.46
CD9-201ENST00000009180 MAGEB6P1A0A0J9YX57 407 aa12.15□□□□□ -0.46
CD9-201ENST00000009180 MYO1BO43795 1136 aa12.15□□□□□ -0.46
CD9-201ENST00000009180 NMIQ13287 307 aaPredicted RBP12.15□□□□□ -0.46
CD9-201ENST00000009180 UBE3CQ15386 1083 aa12.15□□□□□ -0.46
CD9-201ENST00000009180 ZMYM1Q5SVZ6 1142 aa12.15□□□□□ -0.46
CD9-201ENST00000009180 CDAN1Q8IWY9 1227 aa12.15□□□□□ -0.46
CD9-201ENST00000009180 HOMEZQ8IX15 550 aa12.15□□□□□ -0.46
CD9-201ENST00000009180 TEX11Q8IYF3 940 aa12.15□□□□□ -0.46
CD9-201ENST00000009180 OSBP2Q969R2 916 aa12.15□□□□□ -0.46
CD9-201ENST00000009180 RIOK1Q9BRS2 568 aaKnown RBP12.15□□□□□ -0.46
CD9-201ENST00000009180 NOL10Q9BSC4 688 aaKnown RBP12.15□□□□□ -0.46
CD9-201ENST00000009180 DDX4Q9NQI0 724 aaKnown RBP12.15□□□□□ -0.46
CD9-201ENST00000009180 PGAP2Q9UHJ9 254 aa12.15□□□□□ -0.46
CD9-201ENST00000009180 ECM29Q5VYK3 1845 aa12.15□□□□□ -0.46
CD9-201ENST00000009180 CNTNAP1P78357 1384 aa12.15□□□□□ -0.46
CD9-201ENST00000009180 TRAF5O00463 557 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 DSG3P32926 999 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 PPP4CP60510 307 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 TCP10Q12799 353 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 PICALMQ13492 652 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 BMP2KLQ5H9B9 411 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 PRAMEF18Q5VWM3 479 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 CHADLQ6NUI6 762 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 CCDC129Q6ZRS4 1044 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 KRT26Q7Z3Y9 468 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 USP48Q86UV5 1035 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 ZFPM1Q8IX07 1006 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 ZC3H15Q8WU90 426 aaKnown RBP12.14□□□□□ -0.47
CD9-201ENST00000009180 APPBP2Q92624 585 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 DCPSQ96C86 337 aaKnown RBP12.14□□□□□ -0.47
CD9-201ENST00000009180 TMOD2Q9NZR1 351 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 FAM198AQ9UFP1 575 aa12.14□□□□□ -0.47
CD9-201ENST00000009180 PRKAB2O43741 272 aa12.13□□□□□ -0.47
CD9-201ENST00000009180 IGSF3O75054 1194 aa12.13□□□□□ -0.47
CD9-201ENST00000009180 WDHD1O75717 1129 aaPredicted RBP12.13□□□□□ -0.47
CD9-201ENST00000009180 TOMM70O94826 608 aa12.13□□□□□ -0.47
CD9-201ENST00000009180 BAG3O95817 575 aa12.13□□□□□ -0.47
CD9-201ENST00000009180 ZFYP08048 801 aaPredicted RBP12.13□□□□□ -0.47
CD9-201ENST00000009180 SLC4A8Q2Y0W8 1093 aa12.13□□□□□ -0.47
CD9-201ENST00000009180 POTEHQ6S545 545 aa12.13□□□□□ -0.47
CD9-201ENST00000009180 APOBEC3FQ8IUX4 373 aaKnown RBP12.13□□□□□ -0.47
CD9-201ENST00000009180 MAPKAPK5Q8IW41 473 aa12.13□□□□□ -0.47
CD9-201ENST00000009180 IL25Q9H293 177 aa12.13□□□□□ -0.47
CD9-201ENST00000009180 DIAPH3Q9NSV4 1193 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms