RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 CnpP16330 420 aa22.46■■□□□ 1.19
Scn1b-203ENSMUST00000211945 Tigd5Q499M4 642 aa22.46■■□□□ 1.19
Scn1b-203ENSMUST00000211945 Ppip5k2Q6ZQB6 1129 aa22.46■■□□□ 1.19
Scn1b-203ENSMUST00000211945 Shtn1Q8K2Q9 631 aa22.46■■□□□ 1.19
Scn1b-203ENSMUST00000211945 Lman1lQ8VCD3 505 aa22.45■■□□□ 1.18
Scn1b-203ENSMUST00000211945 MlphQ91V27 590 aa22.45■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Tbc1d7Q9D0K0 293 aa22.45■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Borcs6Q9D6W8 360 aa22.45■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Upf1Q9EPU0 1124 aaKnown RBP22.45■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Cacna1fQ9JIS7 1985 aa22.45■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Pcdh15Q99PJ1 1943 aa22.44■■□□□ 1.18
Scn1b-203ENSMUST00000211945 RubcnlQ3TD16 648 aa22.44■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Mum1l1Q4VA55 681 aa22.44■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Ifit2Q64112 472 aa22.44■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Xrcc4Q924T3 326 aa22.44■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Fzd9Q9R216 592 aa22.44■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Ubxn2aQ99KJ0 258 aa22.43■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Rad50P70388 1312 aa22.43■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Myo1bP46735 1107 aa22.42■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Klhdc9Q3USL1 350 aa22.42■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Kcnq3Q8K3F6 873 aa22.42■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Lrrfip2Q91WK0 415 aa22.42■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Prss40A6H6T1 365 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 GnptabQ69ZN6 1235 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 DaglaQ6WQJ1 1044 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Trmt2aQ8BNV1 574 aaKnown RBP22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Usp44Q8C2S0 711 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Gbp7Q91Z40 638 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Ak7Q9D2H2 614 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 SisF8VQM5 1818 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Scn10aQ6QIY3 1958 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Flvcr1B2RXV4 560 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Slc4a9E9PUP3 929 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Cacnb3P54285 484 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Scaf8Q6DID3 1268 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Kank4Q6P9J5 1016 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Myl6bQ8CI43 207 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Mlh1Q9JK91 760 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Ak2Q9WTP6 239 aa22.41■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Lamb1P02469 1786 aa22.4■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Lbhd1A0A087WPA0 259 aa22.4■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Prss51A0A286YDY8 319 aa22.4■■□□□ 1.18
Scn1b-203ENSMUST00000211945 DnttP09838 530 aa22.4■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Ms4a2P20490 235 aa22.4■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Gja3Q64448 417 aa22.4■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Zcchc17Q9ESX4 241 aaKnown RBP22.4■■□□□ 1.18
Scn1b-203ENSMUST00000211945 Rbm8a2A0A0N4SUH6 174 aa22.39■■□□□ 1.17
Scn1b-203ENSMUST00000211945 MccE9PWI3 1003 aa22.39■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Tbc1d32Q3URV1 1296 aa22.39■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Ctr9Q62018 1173 aaKnown RBP22.39■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Yipf1Q91VU1 306 aa22.39■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Rbm8aQ9CWZ3 174 aa22.39■■□□□ 1.17
Scn1b-203ENSMUST00000211945 RabggtaQ9JHK4 567 aa22.39■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Plxnb2B2RXS4 1842 aa22.39■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Myh2G3UW82 1942 aa22.39■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Dennd3A2RT67 1274 aa22.38■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Ugt1a5B2RT14 529 aa22.38■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Ces1aE9PYP1 563 aa22.38■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Nolc1E9Q5C9 702 aaKnown RBP22.38■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Prpf38aQ4FK66 312 aaKnown RBP22.38■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Tmprss11eQ5S248 423 aa22.38■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Sept14Q9DA97 430 aa22.38■■□□□ 1.17
Scn1b-203ENSMUST00000211945 NapbP28663 298 aa22.37■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Eef2P58252 858 aaKnown RBP22.37■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Fxr1Q61584 677 aaKnown RBP22.37■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Shisa4Q8CA71 197 aa22.37■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Znf638Q61464 1960 aaKnown RBP22.37■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Dock5B2RY04 1868 aa22.37■■□□□ 1.17
Scn1b-203ENSMUST00000211945 SobpQ0P5V2 864 aa22.36■■□□□ 1.17
Scn1b-203ENSMUST00000211945 HelbQ6NVF4 1074 aa22.36■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Ltbp2O08999 1813 aa22.36■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Nova2D3YVV7 556 aaKnown RBP22.36■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Slc27a3O88561 667 aa22.36■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Vcam1P29533 739 aa22.36■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Olfr118Q7TRJ6 321 aa22.36■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Liat1Q810M6 228 aa22.36■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Pramel6Q810Y9 485 aa22.36■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Igf2bp3Q9CPN8 579 aaKnown RBP22.36■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Rbm46P86049 533 aa22.35■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Fam178bQ24JP3 464 aa22.35■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Klrg2Q3UM83 387 aa22.35■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Ncbp1Q3UYV9 790 aaKnown RBP22.35■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Ehmt1Q5DW34 1296 aa22.35■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Ipo8Q7TMY7 1010 aa22.35■■□□□ 1.17
Scn1b-203ENSMUST00000211945 HibadhQ99L13 335 aaKnown RBP22.35■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Fam186bD3Z420 943 aa22.34■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Prl7a2O54831 253 aa22.34■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Spata5Q3UMC0 893 aaKnown RBP22.34■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Stxbp5lQ5DQR4 1185 aa22.34■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Tmc4Q7TQ65 694 aa22.34■■□□□ 1.17
Scn1b-203ENSMUST00000211945 PaoxQ8C0L6 504 aa22.34■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Eaf2Q91ZD6 262 aa22.34■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Cry2Q9R194 592 aa22.34■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Usp42B2RQC2 1324 aaKnown RBP22.33■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Lgr6Q3UVD5 967 aa22.33■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Ttll4Q80UG8 1193 aa22.33■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Jakmip1Q8BVL9 626 aa22.33■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Angel2Q8K1C0 544 aa22.33■■□□□ 1.17
Scn1b-203ENSMUST00000211945 PdgfdQ925I7 370 aa22.33■■□□□ 1.17
Scn1b-203ENSMUST00000211945 Ccdc39Q9D5Y1 937 aa22.33■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms