RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Pcdhb14Q6PB90 796 aa13.01□□□□□ -0.33
Lig1-211ENSMUST00000177588 Miga2Q8BK03 593 aa13.01□□□□□ -0.33
Lig1-211ENSMUST00000177588 Ttc19Q8CC21 365 aa13.01□□□□□ -0.33
Lig1-211ENSMUST00000177588 Dnajc25A2ALW5 357 aa13.01□□□□□ -0.33
Lig1-211ENSMUST00000177588 AK157302I3ITR1 129 aa13.01□□□□□ -0.33
Lig1-211ENSMUST00000177588 Mcm6P97311 821 aa13.01□□□□□ -0.33
Lig1-211ENSMUST00000177588 Isca1Q9D924 129 aa13.01□□□□□ -0.33
Lig1-211ENSMUST00000177588 Myo3bQ1EG27 1305 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Lcmt1A0A0U1RNF2 332 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Ric8aQ3TIR3 530 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Acnat2Q8BGG9 420 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 ImmtQ8CAQ8 757 aaKnown RBP13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Ppp4r3bQ922R5 820 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Arap2Q8BZ05 1703 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Cyp3a57D3YYZ0 503 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Anp32eP97822 260 aaKnown RBP13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Epha2Q03145 977 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Mctp2Q5RJH2 878 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Tpm4Q6IRU2 248 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Q8BT18 775 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Q8CEZ4 452 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Ciao1Q99KN2 339 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Atp12aQ9Z1W8 1035 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Sycp2lA0A0M3U1B0 842 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Bicdl1A0JNT9 577 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Diaph1O08808 1255 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 EmbP21995 330 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Fsd2Q8BZ52 692 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Zmynd15Q8C0R7 736 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Kcnq3Q8K3F6 873 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Tmem132aQ922P8 1018 aa13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Gnl2Q99LH1 728 aaKnown RBP13□□□□□ -0.33
Lig1-211ENSMUST00000177588 Mrc1Q61830 1456 aa12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 CpdO89001 1377 aa12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 BcanQ61361 883 aa12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 IqcgQ80W32 419 aa12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 Wdr3Q8BHB4 942 aaKnown RBP12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 Smc4Q8CG47 1286 aa12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 Brd3Q8K2F0 726 aaKnown RBP12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 IncenpQ9WU62 880 aa12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 Myh7Q91Z83 1935 aa12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 Rtel1Q0VGM9 1203 aa12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 Ppp2r2cQ8BG02 447 aa12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 Maats1Q8BRC6 783 aa12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 Fam213aQ9CYH2 218 aa12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 Col3a1P08121 1464 aa12.99□□□□□ -0.33
Lig1-211ENSMUST00000177588 Fer1l6E0CZ42 1862 aa12.98□□□□□ -0.33
Lig1-211ENSMUST00000177588 Map7d2A2AG50 781 aa12.98□□□□□ -0.33
Lig1-211ENSMUST00000177588 Atp8b5A3FIN4 1183 aa12.98□□□□□ -0.33
Lig1-211ENSMUST00000177588 Myo1aO88329 1043 aa12.98□□□□□ -0.33
Lig1-211ENSMUST00000177588 Specc1lQ2KN98 1118 aaKnown RBP12.98□□□□□ -0.33
Lig1-211ENSMUST00000177588 Map10Q8BJS7 891 aa12.98□□□□□ -0.33
Lig1-211ENSMUST00000177588 Appbp2Q9DAX9 585 aa12.98□□□□□ -0.33
Lig1-211ENSMUST00000177588 Rapgef4Q9EQZ6 1011 aa12.98□□□□□ -0.33
Lig1-211ENSMUST00000177588 Gm11983V9GXS8 105 aa12.98□□□□□ -0.33
Lig1-211ENSMUST00000177588 Cdc27A2A6Q5 825 aa12.98□□□□□ -0.33
Lig1-211ENSMUST00000177588 Cplx1P63040 134 aa12.98□□□□□ -0.33
Lig1-211ENSMUST00000177588 Mast2Q60592 1734 aa12.98□□□□□ -0.33
Lig1-211ENSMUST00000177588 Pde4bB1AWC9 736 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Ubap1lG3UW59 384 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Llgl2Q3TJ91 1027 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Bag1Q60739 355 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Dpf2Q61103 391 aaKnown RBP12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Cep120Q7TSG1 988 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Ncoa5Q91W39 579 aaKnown RBP12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Ehd4Q9EQP2 541 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Cyp26a1O55127 497 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Arhgef16Q3U5C8 713 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Washc4Q3UMB9 1173 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Tbx2Q60707 711 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Asnsd1Q8BFS9 627 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Slfnl1Q8BHW9 410 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 GptQ8QZR5 496 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Cnot6lQ8VEG6 555 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Dapk3O54784 448 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Dnm1P39053 867 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Myo1bP46735 1107 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Arglu1Q3UL36 271 aaKnown RBP12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 ErmnQ5EBJ4 281 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Prl2c1Q5SVL9 228 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Prpf4bQ61136 1007 aaKnown RBP12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Trim25Q61510 634 aaKnown RBP12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Ncoa7Q6DFV7 943 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Vps37dQ810I0 261 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Klhl30Q8C3F7 581 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Rassf4Q8CB96 322 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Nek9Q8K1R7 984 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Nav1Q8CH77 1875 aa12.97□□□□□ -0.33
Lig1-211ENSMUST00000177588 Metap2O08663 478 aaKnown RBP12.96□□□□□ -0.33
Lig1-211ENSMUST00000177588 Haus7Q8BKT8 364 aa12.96□□□□□ -0.33
Lig1-211ENSMUST00000177588 Pcdhb22Q91XZ8 794 aa12.96□□□□□ -0.33
Lig1-211ENSMUST00000177588 NenfQ9CQ45 171 aa12.96□□□□□ -0.33
Lig1-211ENSMUST00000177588 Gm5624F6ZZG8 207 aa12.96□□□□□ -0.33
Lig1-211ENSMUST00000177588 TsksO54887 585 aa12.96□□□□□ -0.33
Lig1-211ENSMUST00000177588 Nol10Q5RJG1 687 aaKnown RBP12.96□□□□□ -0.33
Lig1-211ENSMUST00000177588 AbraQ8BUZ1 375 aa12.96□□□□□ -0.33
Lig1-211ENSMUST00000177588 Lrrc2Q8VDB8 371 aa12.96□□□□□ -0.33
Lig1-211ENSMUST00000177588 Hap1O35668 628 aa12.95□□□□□ -0.34
Lig1-211ENSMUST00000177588 CebpaP53566 359 aa12.95□□□□□ -0.34
Lig1-211ENSMUST00000177588 Krt39Q6IFX4 482 aa12.95□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms