RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Cdc45Q9Z1X9 566 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Slit3Q9WVB4 1523 aa13.11□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 EmbP21995 330 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Irx1P81068 480 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Evi5P97366 809 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Atg9aQ68FE2 551 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Tmco3Q8BH01 678 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Srek1Q8BZX4 494 aaKnown RBP13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Gm28047Q3US59 414 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Hspa4Q61316 841 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Acap3Q6NXL5 833 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Ncaph2Q8BSP2 607 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Fsd2Q8BZ52 692 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Rmi1Q9D4G9 616 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 TefQ9JLC6 301 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Specc1lQ2KN98 1118 aaKnown RBP13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Gnat3Q3V3I2 354 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Fbxw10Q5SUS0 1030 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Ankib1Q6ZPS6 1085 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Haus7Q8BKT8 364 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 GzmnQ920S1 248 aa13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Yeats4Q9CR11 227 aaKnown RBP13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Telo2Q9DC40 840 aaKnown RBP13.1□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Fbxl16A2RT62 479 aa13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Gm5624F6ZZG8 207 aa13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 MafgO54790 162 aa13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Iqsec3Q3TES0 1195 aa13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Abcf1Q6P542 837 aaKnown RBP13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Ccdc57Q6PHN1 1016 aa13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Clic6Q8BHB9 596 aa13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Tgs1Q923W1 853 aa13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Sept12Q9D451 317 aa13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 PdclQ9DBX2 301 aa13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Dapk3O54784 448 aa13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Slc4a1P04919 929 aa13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Anxa1P10107 346 aaKnown RBP13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Krt25Q8VCW2 446 aa13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Ncoa5Q91W39 579 aaKnown RBP13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Filip1Q9CS72 1211 aa13.09□□□□□ -0.31
Prpf40b-208ENSMUST00000136980 Calcoco2A2A6M5 331 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Atp8b5A3FIN4 1183 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Pde11aP0C1Q2 933 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Adam1aQ60813 791 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 ZyxQ62523 564 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Zranb3Q6NZP1 1069 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Cd209bQ8CJ91 325 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ccng2O08918 344 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Kif3cO35066 796 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Pla2g4bP0C871 782 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 ItpripQ3TNL8 555 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 NfkbibQ60778 359 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Adcy2Q80TL1 1090 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Tpcn2Q8BWC0 731 aa13.08□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Prl3d3A0A0M6L0J6 224 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Rnaseh1O70338 285 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Traf1P39428 409 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ccdc40Q8BI79 1192 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Dact1Q8R4A3 778 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ankrd1Q9CR42 319 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Cbx8Q9QXV1 362 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Scn7aB1AYL1 1681 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Rimbp3Q3V0F0 1606 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Exoc3l2D3YUP5 789 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Cyp26a1O55127 497 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Pald1P70261 859 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Map9Q3TRR0 646 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Usp49Q6P9L4 685 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ttc19Q8CC21 365 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ankrd49Q8VE42 238 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Kcnh3Q9WVJ0 1095 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 TnksQ6PFX9 1320 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Kdm6aO70546 1401 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Gm20425E9Q035 978 aaKnown RBP13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 1700122O11RikJ3QPW6 241 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 SrprbP47758 269 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Klra5Q60652 266 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 FntaQ61239 377 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Gpt2Q8BGT5 522 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Cnot6lQ8VEG6 555 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Vps16Q920Q4 839 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Cep89Q9CZX2 791 aa13.07□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 A0A1L1SQF0 893 aa13.06□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Lipo1J3QME6 396 aa13.06□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Me1P06801 572 aa13.06□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 HalP35492 657 aa13.06□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 ThemisQ8BGW0 636 aa13.06□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Kcnj14Q8JZN3 434 aa13.06□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Brd3Q8K2F0 726 aaKnown RBP13.06□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Tab2Q99K90 693 aa13.06□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Wdr64Q9D565 1086 aa13.06□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 MicalclQ9D5U9 680 aa13.06□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 C5P06684 1680 aa13.06□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Wnk3Q80XP9 1757 aa13.06□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Q32P12 615 aa13.06□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ankrd35E9Q9D8 996 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Gtf2f1Q3THK3 508 aaKnown RBP13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ric8aQ3TIR3 530 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Ctnna3Q65CL1 895 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Apbb1ipQ8R5A3 670 aa13.05□□□□□ -0.32
Prpf40b-208ENSMUST00000136980 Synpo2Q91YE8 1087 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 61.3 ms