RNA–Protein interactions for RNA: ENSMUST00000112577.7

Pkp4-203, Transcript of Plakophilin-4, mousemouse

TSL 5 BASIC

Gene Pkp4, Length 4,222 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-203ENSMUST00000112577 Gm45140A0A0N4SUM8 220 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Spag5Q7TME2 1165 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Nap1l5Q9JJF0 156 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Clip2Q9Z0H8 1047 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Atp12aQ9Z1W8 1035 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Kcnh4A2A5F7 1018 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Sept1P42209 366 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Sun3Q5SS91 320 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Ift88Q61371 824 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Atg9aQ68FE2 551 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Fchsd1Q6PFY1 688 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Ints5Q8CHT3 1018 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Brd3Q8K2F0 726 aaKnown RBP9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 IncenpQ9WU62 880 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Homer1Q9Z2Y3 366 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Lmtk3Q5XJV6 1424 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Med23Q80YQ2 1367 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Terf1P70371 421 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Tmtc2Q56A06 836 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Glg1Q61543 1175 aaKnown RBP9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Vps37dQ810I0 261 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Ift74Q8BKE9 600 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Cnpy2Q9QXT0 182 aa9.93□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Lipo1J3QME6 396 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Paxbp1P58501 919 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Cdcp1Q5U462 833 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Pknox2Q8BG99 474 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Zfp317Q8C0Q5 607 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Map7d2A2AG50 781 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Bach1P97302 739 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Pex1Q5BL07 1284 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Slc44a1Q6X893 653 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Emilin1Q99K41 1017 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Zfp804bA0A0G2JGH6 1343 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Atp1b3P97370 278 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Bsdc1Q80Y55 427 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Luc7lQ9CYI4 371 aaKnown RBP9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 MicalclQ9D5U9 680 aa9.92□□□□□ -0.82
Pkp4-203ENSMUST00000112577 InhbeO08717 350 aa9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Mknk2Q8CDB0 459 aa9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Tubb4aQ9D6F9 444 aa9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Uri1Q3TLD5 531 aa9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 RragbQ6NTA4 374 aa9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Kcnj14Q8JZN3 434 aa9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Gpr108Q91WD0 569 aa9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Pold4Q9CWP8 107 aa9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Mroh6V9GX81 722 aa9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Pde11aP0C1Q2 933 aa9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 GabrdP22933 449 aa9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Pafah1b1P63005 410 aaKnown RBP9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Xrcc4Q924T3 326 aa9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Pkd2l2Q9JLG4 621 aa9.91□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Kifc2O08672 792 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Pald1P70261 859 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Pfkfb1P70266 471 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Usp28Q5I043 1051 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Ttc5Q99LG4 440 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Grpel1Q99LP6 217 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Polr2dQ9D7M8 142 aaKnown RBP9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Gm43638A0A0J9YU36 694 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Slc38a10Q5I012 1090 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Mdc1Q5PSV9 1707 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Hexim1Q8R409 356 aaKnown RBP9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Ubac1Q8VDI7 409 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Kcnq5Q9JK45 933 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Ptpn23Q6PB44 1692 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Col20a1Q923P0 1320 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 PparaP23204 468 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Stat5bP42232 786 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Il15P48346 162 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 ItpripQ3TNL8 555 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Sptlc3Q8BG54 563 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Susd4Q8BH32 490 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Maats1Q8BRC6 783 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 SltmQ8CH25 1031 aaKnown RBP9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Calml3Q9D6P8 149 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Ccne2Q9Z238 404 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Cyp2ab1S4R196 498 aa9.9□□□□□ -0.82
Pkp4-203ENSMUST00000112577 Ccdc121E9Q6D3 323 aa9.9□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Cd3dP04235 173 aa9.9□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Cyp19a1P28649 503 aa9.9□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Nap1l1P28656 391 aaKnown RBP9.9□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Nme8Q715T0 586 aa9.9□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Ano2Q8CFW1 1002 aa9.9□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Clic4Q9QYB1 253 aa9.9□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Kif3cO35066 796 aa9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Smtnl1Q99LM3 459 aa9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Cxcl11Q9JHH5 100 aa9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Knop1Q9Z2Q2 478 aaKnown RBP9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Slit2Q9R1B9 1521 aa9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Gna11P21278 359 aa9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Gng11P61953 73 aa9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 TrhQ62361 256 aa9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Slc13a4Q8BZ82 625 aa9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Irx4Q9QY61 515 aa9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Ubn2Q80WC1 1314 aa9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Nup153E9Q3G8 1462 aaKnown RBP9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Carmil3Q3UFQ8 1375 aa9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 Pde5aQ8CG03 865 aa9.89□□□□□ -0.83
Pkp4-203ENSMUST00000112577 ParnQ8VDG3 624 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms