RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Mkrn3Q60764 544 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Edrf1Q6GQV7 1239 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Kcnj14Q8JZN3 434 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Tubgcp2Q921G8 905 aa13.3□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Shank2Q80Z38 1476 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Bicdl1A0JNT9 577 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Gm10134F6ZQC6 126 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Cops6O88545 324 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Anp32eP97822 260 aaKnown RBP13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Rtel1Q0VGM9 1203 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Prl2c1Q5SVL9 228 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Abcf1Q6P542 837 aaKnown RBP13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Clca2Q8BG22 942 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Tns2Q8CGB6 1400 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ltbp4Q8K4G1 1666 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Gm5624F6ZZG8 207 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Cyp2d9P11714 504 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Grin1P35438 938 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Washc4Q3UMB9 1173 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Necab1Q8BG18 352 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Haus7Q8BKT8 364 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Spata32Q8C5V0 334 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Kcnh3Q9WVJ0 1095 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Sik3Q6P4S6 1311 aa13.29□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ccdc121E9Q6D3 323 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 H2afxP27661 143 aaKnown RBP13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Cplx2P84086 134 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Lamb3Q61087 1168 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Dcaf5Q80T85 946 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Zmynd15Q8C0R7 736 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Vps16Q920Q4 839 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Bin2D3Z6Q9 489 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Kif2aP28740 705 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ovgp1Q62010 721 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Sptlc3Q8BG54 563 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 9230110C19RikQ8CC70 267 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Nek9Q8K1R7 984 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Gtpbp4Q99ME9 634 aaKnown RBP13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Psmb7P70195 277 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ift122Q6NWV3 1182 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Ppp2r2cQ8BG02 447 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Bola3Q8CEI1 110 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Q8CEZ4 452 aa13.28□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Phlpp1Q8CHE4 1687 aa13.27□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Cdhr2E9Q7P9 1308 aa13.27□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Pard3Q99NH2 1333 aa13.27□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Sall1Q9ER74 1322 aa13.27□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Zfp597E9Q6S0 419 aa13.27□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Clic6Q8BHB9 596 aa13.27□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Fam53cQ8BXQ8 393 aa13.27□□□□□ -0.28
Col9a1-202ENSMUST00000088349 CpvlQ9D3S9 478 aa13.27□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Efcc1Q9JJF6 558 aa13.27□□□□□ -0.28
Col9a1-202ENSMUST00000088349 Tnni2P13412 182 aa13.27□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Polr2dQ9D7M8 142 aaKnown RBP13.27□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Sycp2lA0A0M3U1B0 842 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 A0A0U1RNP2 1173 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Pex1Q5BL07 1284 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Agtpbp1Q641K1 1218 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Nlrp9aQ66X03 949 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Tpm4Q6IRU2 248 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ranbp6Q8BIV3 1105 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Filip1Q9CS72 1211 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Baiap2l1Q9DBJ3 514 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Carmil3Q3UFQ8 1375 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Pcdhb9E9Q5G2 828 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Pde6aP27664 859 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Luc7l2Q7TNC4 392 aaKnown RBP13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Eno4Q8C042 619 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 IcoslgQ9JHJ8 322 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Hdac6Q9Z2V5 1149 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Zbtb7aO88939 569 aaKnown RBP13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Cdkl5Q3UTQ8 938 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Igsf3Q6ZQA6 1194 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Bsdc1Q80Y55 427 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 BaatQ91X34 420 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ppp4r3bQ922R5 820 aa13.26□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Btn2a2A4QPC6 514 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ces1hD3Z298 562 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Specc1lQ2KN98 1118 aaKnown RBP13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ric1Q69ZJ7 1422 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ncoa7Q6DFV7 943 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Eaf2Q91ZD6 262 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Tmem132aQ922P8 1018 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ccdc47Q9D024 483 aaKnown RBP13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 AatfQ9JKX4 526 aaKnown RBP13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Suclg2Q9Z2I8 433 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 AtrnQ9WU60 1428 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Casp1P29452 402 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Sdc2P43407 202 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Kcnd1Q03719 651 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ttll12Q3UDE2 639 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Phf20l1Q8CCJ9 1013 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Brd3Q8K2F0 726 aaKnown RBP13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Pcdhb22Q91XZ8 794 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ciao1Q99KN2 339 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Dctpp1Q9QY93 170 aa13.25□□□□□ -0.29
Col9a1-202ENSMUST00000088349 EmbP21995 330 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Myo1bP46735 1107 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Usp49Q6P9L4 685 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Fez2Q6TYB5 348 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms