RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Spata2Q8K004 515 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Ifi35Q9D8C4 286 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 AnkarA2RT91 1465 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 PrimpolQ6P1E7 537 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Nuf2Q99P69 463 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Iws1Q8C1D8 766 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 P3h4Q8K2B0 443 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Cwc25Q9DBF7 416 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Sos2Q02384 1333 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Spg7Q3ULF4 781 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 IqceQ6PCQ0 778 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Cdan1Q8CC12 1239 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 CactinQ9CS00 772 aaKnown RBP11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Klhl40Q9D783 621 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Rad23aP54726 363 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 HdxQ14B70 692 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Ppp2r2cQ8BG02 447 aa11.97□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Zfp202Q8C879 641 aa11.96□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Fhod3Q76LL6 1578 aa11.96□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Card6E9PWH2 1175 aa11.96□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Zmynd15Q8C0R7 736 aa11.96□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Acsbg1Q99PU5 721 aa11.96□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Creld2Q9CYA0 350 aa11.96□□□□□ -0.49
Nipbl-201ENSMUST00000052965 S100a5P63084 93 aa11.96□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Ak2Q9WTP6 239 aa11.96□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Caprin2Q05A80 1031 aaKnown RBP11.96□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Rnf40Q3U319 1001 aa11.96□□□□□ -0.49
Nipbl-201ENSMUST00000052965 RilpQ5ND29 369 aa11.96□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Ccdc82Q6PG04 518 aa11.96□□□□□ -0.49
Nipbl-201ENSMUST00000052965 Gm5934D3Z4U6 212 aa11.96□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ncf2O70145 525 aa11.96□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ppp1r21Q3TDD9 780 aa11.96□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Cacna2d4Q5RJF7 1116 aa11.96□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Soga3Q6NZL0 945 aa11.96□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Zranb1Q7M760 708 aa11.96□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ccdc28aQ8CEI3 192 aa11.96□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Prc1Q99K43 603 aaKnown RBP11.96□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Astn2Q80Z10 1352 aa11.96□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Speer4dL7N216 212 aa11.96□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Jmjd4Q8BFT6 427 aa11.96□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Klhdc4Q921I2 584 aa11.96□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Trpc3Q9QZC1 836 aa11.96□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Kdm1aQ6ZQ88 853 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ccdc40Q8BI79 1192 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Morc4Q8BMD7 928 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Myom2Q14BI5 1463 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ppp4r3aQ6P2K6 820 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Apbb1ipQ8R5A3 670 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 FanccP50652 591 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Chpf2Q3UU43 768 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Dzip1lQ499E4 774 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Cct6bQ61390 531 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ddx42Q810A7 929 aaKnown RBP11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Bicdl1A0JNT9 577 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Samd15F6XZJ7 620 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Cog7Q3UM29 770 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Eif3cQ8R1B4 911 aaKnown RBP11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Daam1Q8BPM0 1077 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Vps52Q8C754 723 aaKnown RBP11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ctnna1P26231 906 aaKnown RBP11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Dnajc8Q6NZB0 253 aaKnown RBP11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Adcy2Q80TL1 1090 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Rbm42Q91V81 474 aaKnown RBP11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Stat2Q9WVL2 923 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Klhl34A2AI76 644 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Leo1Q5XJE5 667 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Calml3Q9D6P8 149 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 ErmapQ9JLN5 566 aa11.95□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Edc4Q3UJB9 1406 aaKnown RBP11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Lrrc7Q80TE7 1490 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Bfsp1A2AMT1 669 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ophn1Q99J31 802 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 HnrnpcQ9Z204 313 aaKnown RBP11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Cetn3O35648 167 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ythdc2B2RR83 1445 aaKnown RBP11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Parp2O88554 559 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Stk38lQ7TSE6 464 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Rps6kb1Q8BSK8 525 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Erbb3Q61526 1339 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Spata31d1bE9QA57 1361 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Gli2Q0VGT2 1544 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Abcc2Q8VI47 1543 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Panx2Q6IMP4 677 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Retreg2Q6NS82 541 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 RpainQ9CWY9 219 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Kcnh3Q9WVJ0 1095 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Atp8b2P98199 1209 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 TchpQ3TVW5 497 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Rbbp8nlA2ABX0 614 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ift122Q6NWV3 1182 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Pex19Q8VCI5 299 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Krt25Q8VCW2 446 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Sh2b1Q91ZM2 756 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ccdc124Q9D8X2 217 aaKnown RBP11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 1700109H08RikQ9D9C0 210 aa11.94□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Cdc42bpaQ3UU96 1719 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Atp2b1G5E829 1220 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Frmpd2A0A140LI67 1392 aa11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ltv1Q6NSQ7 470 aaKnown RBP11.93□□□□□ -0.5
Nipbl-201ENSMUST00000052965 Ncaph2Q8BSP2 607 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms