RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Fdx1P46656 188 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Rpusd2Q149F1 553 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Ehmt1Q5DW34 1296 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Agtpbp1Q641K1 1218 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Myl6bQ8CI43 207 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Ltbp2O08999 1813 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Dcdc2bF7BCK0 340 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Tbc1d2bQ3U0J8 965 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Lamc2Q61092 1191 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Mrps27Q8BK72 415 aaKnown RBP10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Atf7Q8R0S1 413 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 MlphQ91V27 590 aa10.55□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Pappa2E9PZ87 1789 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Usp42B2RQC2 1324 aaKnown RBP10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Prss40A6H6T1 365 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Mum1l1Q4VA55 681 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Hand2Q61039 217 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Spty2d1Q68FG3 682 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Stac3Q8BZ71 360 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 ImmtQ8CAQ8 757 aaKnown RBP10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Glis2Q8VDL9 521 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Xrcc4Q924T3 326 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Tnip1Q9WUU8 647 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 NpcdF8VQB8 469 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 UncxO08934 530 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Pde4aO89084 844 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Cap1P40124 474 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 HelbQ6NVF4 1074 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Acap3Q6NXL5 833 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Olfr118Q7TRJ6 321 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Sgsm2Q80U12 1005 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Shisa4Q8CA71 197 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Ndfip2Q91ZP6 311 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Ccdc39Q9D5Y1 937 aa10.54□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Ces1aE9PYP1 563 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Ercc3P49135 783 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Tigd5Q499M4 642 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Ctr9Q62018 1173 aaKnown RBP10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 LdhdQ7TNG8 484 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Kbtbd13Q8C828 458 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Zbed3Q9D0L1 228 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Trpm7Q923J1 1863 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 DnttP09838 530 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Gxylt1Q3UHH8 404 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 DaglaQ6WQJ1 1044 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 EngaseQ8BX80 734 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Cnot6lQ8VEG6 555 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Eaf2Q91ZD6 262 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Ppil2Q9D787 521 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Tgm5Q9D7I9 724 aa10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Rai14Q9EP71 979 aaKnown RBP10.53□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Myh14Q6URW6 2000 aa10.52□□□□□ -0.72
Ccdc28a-201ENSMUST00000052648 Kcnb2A6H8H5 907 aa10.52□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Wnt10bP48614 389 aa10.52□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Lins1Q3U1D0 764 aa10.52□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Spata5Q3UMC0 893 aaKnown RBP10.52□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 1700123L14RikQ3V2K7 440 aa10.52□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 GnptabQ69ZN6 1235 aa10.52□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 1700010I14RikQ7TPG0 532 aa10.52□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Ttc12Q8BW49 704 aa10.52□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Ascc2Q91WR3 749 aa10.52□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Tmem79Q9D709 391 aa10.52□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Dpp7Q9ET22 506 aa10.52□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 RabggtaQ9JHK4 567 aa10.52□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Igf2rQ07113 2483 aaKnown RBP10.52□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Lbhd1A0A087WPA0 259 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Irgm2A0A140LIF8 407 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Myo1bP46735 1107 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Cacnb3P54285 484 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Prpf38aQ4FK66 312 aaKnown RBP10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Zcwpw1Q6IR42 630 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Pramel6Q810Y9 485 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Trappc12Q8K2L8 797 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 LlphQ9D945 130 aaKnown RBP10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Sept14Q9DA97 430 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Fbxl16A2RT62 479 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Casp12O08736 419 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Znf326O88291 580 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 CnpP16330 420 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Cnot7Q60809 285 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Ppm1gQ61074 542 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Ttll4Q80UG8 1193 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Trmt2aQ8BNV1 574 aaKnown RBP10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Ccdc158Q8CDI6 1109 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Yipf1Q91VU1 306 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Krt84Q99M73 603 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Borcs6Q9D6W8 360 aa10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Psma5Q9Z2U1 241 aaKnown RBP10.51□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Cd3dP04235 173 aa10.5□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Pde11aP0C1Q2 933 aa10.5□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Q3TYL0 343 aa10.5□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Ncbp1Q3UYV9 790 aaKnown RBP10.5□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 ErmnQ5EBJ4 281 aa10.5□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Rasgrp4Q8BTM9 673 aa10.5□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 AnlnQ8K298 1121 aaKnown RBP10.5□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Cdca7lQ922M5 438 aa10.5□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 HibadhQ99L13 335 aaKnown RBP10.5□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Zbtb43Q9DAI4 467 aa10.5□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 UtrnE9Q6R7 3430 aa10.5□□□□□ -0.73
Ccdc28a-201ENSMUST00000052648 Plekhg2Q6KAU7 1340 aa10.5□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms