RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Glis3Q6XP49 780 aa26.92■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Ttc12Q8BW49 704 aa26.92■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Tnni2P13412 182 aa26.91■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Prdm1Q60636 856 aa26.91■■□□□ 1.9
Upf3a-201ENSMUST00000043767 B4galnt4Q766D5 1034 aa26.91■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Olfr118Q7TRJ6 321 aa26.91■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Ankrd13aQ80UP5 588 aa26.91■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Gpr150Q8BL07 427 aa26.91■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Hps4Q99KG7 671 aa26.91■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Ccdc39Q9D5Y1 937 aa26.91■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Ddx19aQ61655 478 aaKnown RBP26.91■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Ctr9Q62018 1173 aaKnown RBP26.91■■□□□ 1.9
Upf3a-201ENSMUST00000043767 SlkO54988 1233 aa26.9■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Abl1P00520 1123 aa26.9■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Gas1Q01721 343 aa26.9■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Ddrgk1Q80WW9 315 aa26.9■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Camkk2Q8C078 588 aa26.9■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Pcdhb22Q91XZ8 794 aa26.9■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Vsig10D3YX43 558 aa26.89■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Magea6O89010 325 aa26.89■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Pde11aP0C1Q2 933 aa26.89■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Magea3Q6T340 320 aa26.89■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Otop3Q80UF9 577 aa26.89■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Ncaph2Q8BSP2 607 aa26.89■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Myl6bQ8CI43 207 aa26.89■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Pms1Q8K119 917 aa26.89■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Pcdhb5Q91XZ5 792 aa26.89■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Cd3dP04235 173 aa26.89■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Ppp4cP97470 307 aa26.89■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Q3TYL0 343 aa26.89■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Rpusd2Q149F1 553 aa26.88■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Spire2Q8K1S6 718 aa26.88■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Bap1Q99PU7 728 aa26.88■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Pes1Q9EQ61 584 aaKnown RBP26.88■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Ifi207E9Q3L4 978 aa26.88■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Ctdnep1Q3TP92 244 aa26.88■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Ccdc174Q3U155 467 aa26.88■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Ehmt1Q5DW34 1296 aa26.88■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Tsr2Q8C8T8 191 aa26.88■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Rbm6S4R1W5 1118 aaKnown RBP26.88■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Nedd4P46935 887 aaKnown RBP26.87■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Large2Q5XPT3 690 aa26.87■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Tm4sf1Q64302 202 aa26.87■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Cep55Q8BT07 462 aa26.87■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Krt84Q99M73 603 aa26.87■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Txnrd3Q99MD6 652 aa26.87■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Flt1P35969 1333 aa26.87■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Grem2O88273 168 aa26.86■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Znf326O88291 580 aa26.86■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Ddx31Q6NZQ2 687 aaKnown RBP26.86■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Fsd2Q8BZ52 692 aa26.86■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Tbc1d23Q8K0F1 684 aa26.86■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Med23Q80YQ2 1367 aa26.86■■□□□ 1.89
Upf3a-201ENSMUST00000043767 ErmnQ5EBJ4 281 aa26.86■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Odf2lQ9D478 642 aa26.86■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Ppp1r10Q80W00 888 aaKnown RBP26.85■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Znf428Q8C1M2 176 aa26.85■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Rasa1E9PYG6 1038 aa26.85■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Ythdc1E9Q5K9 736 aaKnown RBP26.85■■□□□ 1.89
Upf3a-201ENSMUST00000043767 TrhQ62361 256 aa26.85■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Hirip3Q8BLH7 601 aa26.85■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Zfp646Q6NV66 1788 aa26.84■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Myl10Q62082 202 aa26.84■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Pramel6Q810Y9 485 aa26.84■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Mboat7Q8CHK3 473 aa26.84■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Nfe2l3Q9WTM4 660 aa26.84■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Adam7O35227 789 aa26.83■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Kcnq2Q9Z351 759 aa26.83■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Eddm13E9Q7F5 164 aa26.83■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Stat1P42225 749 aa26.83■■□□□ 1.89
Upf3a-201ENSMUST00000043767 CbarpQ66L44 698 aa26.83■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Pknox2Q8BG99 474 aa26.83■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Ripk4Q9ERK0 786 aa26.83■■□□□ 1.89
Upf3a-201ENSMUST00000043767 Vmn2r23E9PXI5 849 aa26.82■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Pde6aP27664 859 aa26.82■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Zdhhc9P59268 364 aa26.82■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Cct2P80314 535 aaKnown RBP26.82■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Map3k12Q60700 888 aa26.82■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Tmem59lQ7TNI2 337 aa26.82■■□□□ 1.88
Upf3a-201ENSMUST00000043767 St18Q80TY4 1045 aa26.82■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Ttll4Q80UG8 1193 aa26.82■■□□□ 1.88
Upf3a-201ENSMUST00000043767 BrapQ99MP8 591 aa26.82■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Klf15Q9EPW2 415 aa26.82■■□□□ 1.88
Upf3a-201ENSMUST00000043767 GabreA2AMW3 916 aa26.81■■□□□ 1.88
Upf3a-201ENSMUST00000043767 FanccP50652 591 aa26.81■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Rai14Q9EP71 979 aaKnown RBP26.81■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Zfp804bA0A0G2JGH6 1343 aa26.81■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Ildr2B5TVM2 661 aa26.81■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Cyp2c69E9PXC3 491 aa26.81■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Eef2kO08796 724 aa26.81■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Cyp2c40P56657 491 aa26.81■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Tsc2Q61037 1814 aa26.8■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Cnnm2Q3TWN3 875 aa26.8■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Slc44a1Q6X893 653 aa26.8■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Tex2Q6ZPJ0 1128 aaKnown RBP26.8■■□□□ 1.88
Upf3a-201ENSMUST00000043767 SpidrQ8BGX7 933 aa26.8■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Smc3Q9CW03 1217 aaKnown RBP26.8■■□□□ 1.88
Upf3a-201ENSMUST00000043767 RabggtaQ9JHK4 567 aa26.8■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Ppfia3P60469 1194 aa26.8■■□□□ 1.88
Upf3a-201ENSMUST00000043767 Ubxn2bQ0KL01 331 aa26.8■■□□□ 1.88
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms