RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Sh2b1Q91ZM2 756 aa25.85■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 FerP70451 823 aa25.85■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Olfm5Q8BU90 496 aa25.85■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Efcc1Q9JJF6 558 aa25.85■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Gsta4P24472 222 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Zc3h12cQ5DTV4 884 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Tsr2Q8C8T8 191 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Fam228aQ8CDW1 299 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Fsip1Q9D3V5 435 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 3425401B19RikD3Z1D3 1412 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Speer4f2E9Q366 295 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Rapgef1Q3UHC1 1224 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Gm6583E9Q8Z1 469 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Eif4a2P10630 407 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Atp6v1aP50516 617 aaKnown RBP25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Zscan22Q8BGS5 496 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Bicdl2Q8CHW5 507 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 PparaP23204 468 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 SyncQ9EPM5 470 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Tex14Q7M6U3 1450 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Zscan25B2RX31 543 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Akr1c19G3X9Y6 323 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Tpcn2Q8BWC0 731 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Ifih1Q8R5F7 1025 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Tab2Q99K90 693 aa25.84■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Palm3A2TJV2 734 aa25.83■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Tm6sf1P58749 370 aa25.83■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 GlmnQ8BZM1 596 aa25.83■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Nup58Q8R332 587 aa25.83■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Ccdc7Q9D541 371 aa25.83■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Mapkbp1Q6NS57 1503 aa25.83■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Sem1P60897 70 aa25.83■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Psmd1Q3TXS7 953 aa25.83■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Rps6ka5Q8C050 863 aa25.83■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Ccdc113Q8C5T8 377 aa25.83■■□□□ 1.73
Sh3rf1-201ENSMUST00000034060 Naip7Q9JIB3 1402 aa25.83■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Krt13P08730 437 aa25.83■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Tshz1Q5DTH5 1084 aa25.83■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Retreg2Q6NS82 541 aa25.83■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Tekt3Q6X6Z7 490 aa25.83■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Sar1bQ9CQC9 198 aa25.83■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Tex13c2A0A0G2JGA3 530 aa25.82■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Sparcl1P70663 650 aa25.82■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Tmtc2Q56A06 836 aa25.82■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Slc51bQ80WK2 128 aa25.82■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 IqceQ6PCQ0 778 aa25.82■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Sclt1G5E861 688 aa25.82■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Plcb3P51432 1234 aaKnown RBP25.82■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Spata2Q8K004 515 aa25.82■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Dph6Q9CQ28 267 aa25.82■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Gpatch8A2A6A1 1505 aa25.82■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Lrrc74aA0A1Y7VMD6 494 aa25.82■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Kank4Q6P9J5 1016 aa25.82■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 SpopQ6ZWS8 374 aa25.82■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Wdr7Q920I9 1489 aa25.81■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Clasp2Q8BRT1 1286 aaKnown RBP25.81■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 SdsQ8VBT2 327 aa25.81■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Lrrc43Q3V0L5 667 aa25.81■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Lonp1Q8CGK3 949 aaKnown RBP25.81■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Nip7Q9CXK8 180 aaKnown RBP25.81■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 CalcaP70160 136 aa25.81■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Ppp2r5eQ61151 467 aa25.81■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Gm29094F6Q785 221 aa25.81■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 ChkbO55229 394 aa25.81■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Fchsd1Q6PFY1 688 aa25.81■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Trim68Q8K243 485 aa25.81■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Klhl40Q9D783 621 aa25.81■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 PrphP15331 475 aa25.8■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 PpardP35396 440 aa25.8■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Sec63Q8VHE0 760 aaKnown RBP25.8■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Ythdc2B2RR83 1445 aaKnown RBP25.8■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Polr2dQ9D7M8 142 aaKnown RBP25.8■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Tbc1d2B1AVH7 922 aa25.8■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Slc8a1P70414 970 aa25.8■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 MycbpapQ5SUV2 932 aa25.8■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Ppp1r12cQ3UMT1 782 aa25.8■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Tmem143Q8VD26 458 aa25.8■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 MycbpQ9EQS3 103 aa25.8■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Gm10110D3Z5M2 615 aa25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Rnf40Q3U319 1001 aa25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Luc7l3Q5SUF2 432 aaKnown RBP25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Ccdc13D3YV10 709 aa25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Dcaf17Q3TUL7 519 aa25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Psma7Q9Z2U0 248 aa25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Kdm5bQ80Y84 1544 aa25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Ercc5P35689 1170 aa25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Ccdc189Q6NZQ0 333 aa25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Vps52Q8C754 723 aaKnown RBP25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Efcab8Q8C9R9 203 aa25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Ssx2ipQ8VC66 615 aa25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 9230110C19RikQ8CC70 267 aa25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Mrps25Q9D125 171 aaKnown RBP25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Mrpl12Q9DB15 201 aaKnown RBP25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Cd274Q9EP73 290 aa25.79■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Cdca7Q9D0M2 382 aa25.78■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Rps6ka1P18653 724 aa25.78■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Cracr2aQ3UP38 310 aa25.78■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Lrrc8aQ80WG5 810 aa25.78■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Etf1Q8BWY3 437 aaKnown RBP25.78■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Rsph3bQ9DA80 389 aa25.78■■□□□ 1.72
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms