RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Vps37dQ810I0 261 aa21.25■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Otud6bQ8K2H2 294 aa21.25■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Dnaaf4Q8R368 420 aa21.25■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Prpf4bQ61136 1007 aaKnown RBP21.24■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Gnl3lQ6PGG6 577 aaKnown RBP21.24■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Slitrk3Q810B9 980 aa21.24■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Mroh6V9GX81 722 aa21.24■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Mast3Q3U214 1321 aa21.24■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Arhgef16Q3U5C8 713 aa21.24■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Efcc1Q9JJF6 558 aa21.24■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Casp12O08736 419 aa21.23■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Zbtb7aO88939 569 aaKnown RBP21.23■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Il17raQ60943 864 aa21.23■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Cep120Q7TSG1 988 aa21.23■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 HdgfP51859 237 aaKnown RBP21.23■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Slc38a10Q5I012 1090 aa21.23■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Znf653Q6YND2 615 aa21.23■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Ctdspl2Q8BG15 465 aa21.23■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Popdc2Q9ES82 367 aa21.23■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Med23Q80YQ2 1367 aa21.23■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Rbm43Q99J64 343 aa21.22■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 CenpqQ9CPQ5 267 aa21.22■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Tulp1Q9Z273 543 aa21.22■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Ltbp4Q8K4G1 1666 aa21.22■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Setdb1O88974 1307 aa21.22■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Cep63Q3UPP8 700 aa21.22■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Cdc37Q61081 379 aa21.22■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Pold4Q9CWP8 107 aa21.22■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 FAM186AQ9D9R9 1790 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 DccP70211 1447 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Lama4P97927 1816 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Ugt1a6bK9J7B2 531 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Dapk3O54784 448 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Ccdc174Q3U155 467 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Washc4Q3UMB9 1173 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 ErmnQ5EBJ4 281 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Ugt1a6Q64435 531 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Ugt1a7cQ6ZQM8 531 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Ube3cQ80U95 1083 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Usp49Q6P9L4 685 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Sox30Q8CGW4 782 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Mtmr6Q8VE11 617 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Tomm22Q9CPQ3 142 aa21.21■□□□□ 0.99
Ccdc3-201ENSMUST00000027988 Ms4a1P19437 291 aa21.2■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Lrp5Q91VN0 1614 aa21.2■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 NapbP28663 298 aa21.2■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 CtcfQ61164 736 aaKnown RBP21.2■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Dnajc14Q921R4 703 aa21.2■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Riok1Q922Q2 567 aa21.2■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Diaph1O08808 1255 aa21.19■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Arl8aQ8VEH3 186 aa21.19■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Kcnh3Q9WVJ0 1095 aa21.19■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Lrp6O88572 1613 aa21.19■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Kcnd1Q03719 651 aa21.19■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Otop3Q80UF9 577 aa21.19■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Susd4Q8BH32 490 aa21.19■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Brwd3A2AHJ4 1799 aa21.19■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Tnnt2P50752 301 aa21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Taf3Q5HZG4 932 aa21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Dpf2Q61103 391 aaKnown RBP21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 ZgpatQ8VDM1 511 aa21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Tubgcp2Q921G8 905 aa21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 4930548H24RikQ9D496 437 aa21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Wdr64Q9D565 1086 aa21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Dctn1O08788 1281 aa21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Hap1O35668 628 aa21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Znf326O88291 580 aa21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Plbd2Q3TCN2 594 aa21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Agtpbp1Q641K1 1218 aa21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Ufl1Q8CCJ3 793 aaKnown RBP21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Ddx41Q91VN6 622 aaKnown RBP21.18■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Trim34bJ3QNR8 485 aa21.17■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Creld2Q9CYA0 350 aa21.17■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Abcb6Q9DC29 842 aa21.17■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Prr5lA2AVJ5 370 aa21.17■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Krt39Q6IFX4 482 aa21.17■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Gm4340L7N2C4 268 aa21.16■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Siah1aP61092 282 aa21.16■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Cdkl5Q3UTQ8 938 aa21.16■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Tcp11l1Q8BTG3 509 aa21.16■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Krt84Q99M73 603 aa21.16■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Cnpy3Q9DAU1 276 aa21.16■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 MetP16056 1379 aa21.16■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Frmd7A2AD83 703 aa21.16■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Dctpp1Q9QY93 170 aa21.16■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 4931408C20RikE9PWP9 1381 aa21.16■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Wnt7aP24383 349 aa21.15■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Foxp1P58462 705 aa21.15■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Clic6Q8BHB9 596 aa21.15■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Ankrd1Q9CR42 319 aa21.15■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Vps33aQ9D2N9 598 aa21.15■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Slc4a4O88343 1079 aa21.15■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Cyp7b1Q60991 507 aa21.15■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Hps6Q8BLY7 805 aa21.15■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Tfcp2Q9ERA0 502 aa21.15■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Sycp2lA0A0M3U1B0 842 aa21.14■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Ces1hD3Z298 562 aa21.14■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Tnni2P13412 182 aa21.14■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Myo1bP46735 1107 aa21.14■□□□□ 0.98
Ccdc3-201ENSMUST00000027988 Hic2Q9JLZ6 619 aaKnown RBP21.14■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms