RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Myh7Q91Z83 1935 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Kdm3aQ6PCM1 1323 aa13.09□□□□□ -0.31
Vps54-201ENSMUST00000006221 Myh2G3UW82 1942 aa13.08□□□□□ -0.31
Vps54-201ENSMUST00000006221 Arhgef16Q3U5C8 713 aa13.08□□□□□ -0.32
Vps54-201ENSMUST00000006221 Vps37dQ810I0 261 aa13.08□□□□□ -0.32
Vps54-201ENSMUST00000006221 Mtmr6Q8VE11 617 aa13.08□□□□□ -0.32
Vps54-201ENSMUST00000006221 Cdhr2E9Q7P9 1308 aa13.08□□□□□ -0.32
Vps54-201ENSMUST00000006221 Dapk3O54784 448 aa13.08□□□□□ -0.32
Vps54-201ENSMUST00000006221 Dcaf5Q80T85 946 aa13.08□□□□□ -0.32
Vps54-201ENSMUST00000006221 Slitrk3Q810B9 980 aa13.08□□□□□ -0.32
Vps54-201ENSMUST00000006221 Creld2Q9CYA0 350 aa13.08□□□□□ -0.32
Vps54-201ENSMUST00000006221 Abcb6Q9DC29 842 aa13.08□□□□□ -0.32
Vps54-201ENSMUST00000006221 Mast3Q3U214 1321 aa13.08□□□□□ -0.32
Vps54-201ENSMUST00000006221 Tpm1P58771 284 aa13.08□□□□□ -0.32
Vps54-201ENSMUST00000006221 Rbm33Q9CXK9 1231 aaKnown RBP13.08□□□□□ -0.32
Vps54-201ENSMUST00000006221 Tulp1Q9Z273 543 aa13.08□□□□□ -0.32
Vps54-201ENSMUST00000006221 Usp49Q6P9L4 685 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Efcc1Q9JJF6 558 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Kcnh3Q9WVJ0 1095 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Ssc5dQ8BV57 1371 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Washc4Q3UMB9 1173 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Gnl3lQ6PGG6 577 aaKnown RBP13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Sox30Q8CGW4 782 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Vps33aQ9D2N9 598 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Mroh6V9GX81 722 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Kcnd1Q03719 651 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Dpf2Q61103 391 aaKnown RBP13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Tubgcp2Q921G8 905 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Rbm43Q99J64 343 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Hdac6Q9Z2V5 1149 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Cep63Q3UPP8 700 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Znf532Q6NXK2 1036 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Slx1bQ8BX32 270 aa13.07□□□□□ -0.32
Vps54-201ENSMUST00000006221 Med23Q80YQ2 1367 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Casp12O08736 419 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Zhx1P70121 873 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Plekhf1Q3TB82 279 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Krt39Q6IFX4 482 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Zkscan5Q9Z1D8 819 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Sipa1l3G3X9J0 1776 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Znf326O88291 580 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Zbtb7aO88939 569 aaKnown RBP13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 NapbP28663 298 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Irx2P81066 474 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Ccdc174Q3U155 467 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Agtpbp1Q641K1 1218 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Ankrd1Q9CR42 319 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Cadps2Q8BYR5 1297 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Wdr64Q9D565 1086 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 Foxo4Q9WVH3 505 aa13.06□□□□□ -0.32
Vps54-201ENSMUST00000006221 HdgfP51859 237 aaKnown RBP13.05□□□□□ -0.32
Vps54-201ENSMUST00000006221 Clic6Q8BHB9 596 aa13.05□□□□□ -0.32
Vps54-201ENSMUST00000006221 Gnl2Q99LH1 728 aaKnown RBP13.05□□□□□ -0.32
Vps54-201ENSMUST00000006221 Cdkl5Q3UTQ8 938 aa13.05□□□□□ -0.32
Vps54-201ENSMUST00000006221 ErmnQ5EBJ4 281 aa13.05□□□□□ -0.32
Vps54-201ENSMUST00000006221 Ube3cQ80U95 1083 aa13.05□□□□□ -0.32
Vps54-201ENSMUST00000006221 Krt84Q99M73 603 aa13.05□□□□□ -0.32
Vps54-201ENSMUST00000006221 Pold4Q9CWP8 107 aa13.05□□□□□ -0.32
Vps54-201ENSMUST00000006221 Il17raQ60943 864 aa13.05□□□□□ -0.32
Vps54-201ENSMUST00000006221 Riok1Q922Q2 567 aa13.05□□□□□ -0.32
Vps54-201ENSMUST00000006221 Popdc2Q9ES82 367 aa13.05□□□□□ -0.32
Vps54-201ENSMUST00000006221 Dctpp1Q9QY93 170 aa13.05□□□□□ -0.32
Vps54-201ENSMUST00000006221 Nav1Q8CH77 1875 aa13.05□□□□□ -0.32
Vps54-201ENSMUST00000006221 Gm5624F6ZZG8 207 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Hap1O35668 628 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Polr2dQ9D7M8 142 aaKnown RBP13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Setdb1O88974 1307 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Ces1hD3Z298 562 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 GmnnO88513 206 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Cplx2P84086 134 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 IqcgQ80W32 419 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Vps18Q8R307 973 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Mical1Q8VDP3 1048 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Sycp2lA0A0M3U1B0 842 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Slc38a10Q5I012 1090 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Otop3Q80UF9 577 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Tcp11l1Q8BTG3 509 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Vps16Q920Q4 839 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Pik3ap1Q9EQ32 811 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Tfcp2Q9ERA0 502 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Jakmip2D3YXK0 820 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Tnni2P13412 182 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Ift122Q6NWV3 1182 aa13.04□□□□□ -0.32
Vps54-201ENSMUST00000006221 Pla2g4bP0C871 782 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Foxp1P58462 705 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Pex1Q5BL07 1284 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Cyp7b1Q60991 507 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Etf1Q8BWY3 437 aaKnown RBP13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Klhl30Q8C3F7 581 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Nek3Q9R0A5 511 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 CrcpO35427 148 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Paxbp1P58501 919 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Cnpy3Q9DAU1 276 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Lama4P97927 1816 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Trim34bJ3QNR8 485 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Dctn1O08788 1281 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Myo1bP46735 1107 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 BccipQ9CWI3 316 aa13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Hic2Q9JLZ6 619 aaKnown RBP13.03□□□□□ -0.32
Vps54-201ENSMUST00000006221 Plbd2Q3TCN2 594 aa13.02□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 64.6 ms