RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Slc13a4Q8BZ82 625 aa10.8□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Rbm43Q99J64 343 aa10.8□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Abcb6Q9DC29 842 aa10.8□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Tmem2Q5FWI3 1383 aa10.8□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Cyp4f39Q8BGU0 532 aa10.8□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Rreb1Q3UH06 1700 aaKnown RBP10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Ubn2Q80WC1 1314 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Cyp2j7A0A140T8U1 504 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Cyb5rlB1AS42 316 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Ccdc121E9Q6D3 323 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 XpcP51612 930 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Ap5z1Q3U829 807 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Scaf1Q5U4C3 1256 aaKnown RBP10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Trak2Q6P9N8 913 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 AmfrQ9R049 643 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Ccne2Q9Z238 404 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Odf2A3KGV1 830 aaKnown RBP10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 IntuQ059U7 942 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Tshz2Q68FE9 1030 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Mei1Q9D4I2 1268 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Magi2Q9WVQ1 1275 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Col15a1O35206 1367 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Pcdhb9E9Q5G2 828 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Api5O35841 504 aaKnown RBP10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Pafah1b1P63005 410 aaKnown RBP10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Zrsr2Q62377 462 aaKnown RBP10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Sp8Q8BMJ8 486 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 CerkQ8K4Q7 531 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Ubac1Q8VDI7 409 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Klc3Q91W40 508 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Brms1Q99N20 246 aa10.79□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Cyp3a57D3YYZ0 503 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 LtkP08923 888 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Atp8a2P98200 1148 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Ranbp6Q8BIV3 1105 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Arl8aQ8VEH3 186 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Suclg2Q9Z2I8 433 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Sos2Q02384 1333 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Kcnb2A6H8H5 907 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Hmx1O70218 332 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 SsbP32067 415 aaKnown RBP10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 MpndQ3TV65 487 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Krt39Q6IFX4 482 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Smarcc2Q6PDG5 1213 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Ube2oQ6ZPJ3 1288 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Rufy1Q8BIJ7 712 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Etf1Q8BWY3 437 aaKnown RBP10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Smc1bQ920F6 1248 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 UvssaQ9D479 717 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 AdgbG3UZ78 1657 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Izumo3A6PWV3 263 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Adck5Q80V03 582 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Nod2Q8K3Z0 1020 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Galntl5Q9D4M9 431 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Hip1rQ9JKY5 1068 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Spef2Q8C9J3 1734 aa10.78□□□□□ -0.68
Col6a1-201ENSMUST00000001147 CebpaP53566 359 aa10.77□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Traf3ip1Q149C2 625 aa10.77□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Zc3h12cQ5DTV4 884 aa10.77□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Ovgp1Q62010 721 aa10.77□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Pold4Q9CWP8 107 aa10.77□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Efcc1Q9JJF6 558 aa10.77□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Ltb4r2Q9JJL9 360 aa10.77□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Homer1Q9Z2Y3 366 aa10.77□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Chd4Q6PDQ2 1915 aaKnown RBP10.77□□□□□ -0.68
Col6a1-201ENSMUST00000001147 Akr1c19G3X9Y6 323 aa10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Specc1lQ2KN98 1118 aaKnown RBP10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Zbtb38Q3LR78 1197 aa10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Atg9aQ68FE2 551 aa10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Dhx40Q6PE54 779 aaKnown RBP10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Kif20bQ80WE4 1774 aaKnown RBP10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Prl3d1P18121 224 aa10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Klf15Q9EPW2 415 aa10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Prr16A3KMN5 304 aa10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Snrpa1P57784 255 aaKnown RBP10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 C87499Q3UX49 493 aa10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Znf532Q6NXK2 1036 aa10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Exoc8Q6PGF7 716 aa10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Ccdc73Q8CDM4 1066 aa10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Trim52Q8CDV4 233 aa10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 RarsQ9D0I9 660 aaKnown RBP10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Atp1a4Q9WV27 1032 aa10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Letm1Q9Z2I0 738 aa10.77□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Abcc10Q8R4P9 1501 aa10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 MarcksP26645 309 aaKnown RBP10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Pde1cQ64338 706 aa10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Rnf187Q8BFX1 236 aa10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Olfm5Q8BU90 496 aa10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Ppfibp1Q8C8U0 969 aaKnown RBP10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Tcof1O08784 1320 aaKnown RBP10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 CoblQ5NBX1 1337 aaKnown RBP10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Tns3Q5SSZ5 1440 aa10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Rgs9O54828 675 aa10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Zbtb7aO88939 569 aaKnown RBP10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Cyp24a1Q64441 514 aa10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Tsen34Q8BMZ5 316 aa10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Eaf2Q91ZD6 262 aa10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 IcoslgQ9JHJ8 322 aa10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Uchl5Q9WUP7 329 aa10.76□□□□□ -0.69
Col6a1-201ENSMUST00000001147 Large1Q9Z1M7 756 aa10.76□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms