RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 V9GY05 133 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 HELZP42694 1942 aaKnown RBP2.1□□□□□ -2.07
CNOT1-223ENST00000628857 RAI1Q7Z5J4 1906 aaPredicted RBP2.1□□□□□ -2.07
CNOT1-223ENST00000628857 ADGRB3O60242 1522 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 HMGXB3Q12766 1538 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 CFAP74Q9C0B2 1584 aa2.1□□□□□ -2.07
CNOT1-223ENST00000628857 MYO5AQ9Y4I1 1855 aaKnown RBP2.09□□□□□ -2.07
CNOT1-223ENST00000628857 RGS12O14924 1447 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 MROH2AA6NES4 1674 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 CFTRP13569 1480 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 SHANK3Q9BYB0 1731 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 NWD2Q9ULI1 1742 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 MARF1Q9Y4F3 1742 aaKnown RBP2.09□□□□□ -2.07
CNOT1-223ENST00000628857 IGLV8-61A0A075B6I0 122 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 TRBV20-1A0A075B6N2 111 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 A0A087WWC5 75 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 LOC389332A0A1B0GUA5 103 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 C7orf77A4D0Y5 90 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 HMSDA8MTL9 139 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 PITX3O75364 302 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 CST7O76096 145 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 TRACP01848 142 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 GYPAP02724 150 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 TRGC1P0CF51 173 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 IGLC2P0DOY2 106 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 IGLC3P0DOY3 106 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 SLC25A6P12236 298 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 TPT1P13693 172 aaKnown RBP2.09□□□□□ -2.07
CNOT1-223ENST00000628857 NFYAP23511 347 aaPredicted RBP2.09□□□□□ -2.07
CNOT1-223ENST00000628857 RPL22P35268 128 aaKnown RBP2.09□□□□□ -2.07
CNOT1-223ENST00000628857 ASIPP42127 132 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 CXCL5P42830 114 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 INSL3P51460 131 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 POLR2JP52435 117 aaKnown RBP2.09□□□□□ -2.07
CNOT1-223ENST00000628857 CRISP3P54108 245 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 MP68P56378 58 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 TAS2R45P59539 299 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 PRR4Q16378 134 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 UBE2SQ16763 222 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 SP6Q3SY56 376 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 MRPL2Q5T653 305 aaKnown RBP2.09□□□□□ -2.07
CNOT1-223ENST00000628857 C1orf140Q5VVS0 124 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 TMEM236Q5W0B7 351 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 Q6ZS92 163 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 WDR86Q86TI4 376 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 KRTAP11-1Q8IUC1 163 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 TMEM75Q8N9X5 138 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 C11orf72Q8NBR9 251 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 OR11H7Q8NGC8 314 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 OR9G1Q8NH87 305 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 VSTM2AQ8TAG5 236 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 MRPL30Q8TCC3 161 aaKnown RBP2.09□□□□□ -2.07
CNOT1-223ENST00000628857 NEURL3Q96EH8 262 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 S100A16Q96FQ6 103 aaKnown RBP2.09□□□□□ -2.07
CNOT1-223ENST00000628857 ZC2HC1AQ96GY0 325 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 VSIG2Q96IQ7 327 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 IMMP2LQ96T52 175 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 TM2D3Q9BRN9 247 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 ST20Q9HBF5 79 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 C21orf62Q9NYP8 219 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 CACFD1Q9UGQ2 172 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 COQ4Q9Y3A0 265 aa2.09□□□□□ -2.07
CNOT1-223ENST00000628857 PLXNA4Q9HCM2 1894 aa2.09□□□□□ -2.08
CNOT1-223ENST00000628857 PTPN23Q9H3S7 1636 aa2.09□□□□□ -2.08
CNOT1-223ENST00000628857 THSD7AQ9UPZ6 1657 aa2.09□□□□□ -2.08
CNOT1-223ENST00000628857 ATRNO75882 1429 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 PEAK1Q9H792 1746 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 ATP7BP35670 1465 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 LRRC9Q6ZRR7 1453 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 PATJQ8NI35 1801 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 RALGAPA2Q2PPJ7 1873 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 TANC1Q9C0D5 1861 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 TRAV12-2A0A075B6T6 113 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 SMIM26A0A096LP01 95 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 IGHV1-58A0A0C4DH39 117 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 C7orf66A4D0T2 115 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 FAM24AA6NFZ4 105 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 ZNF727A8MUV8 499 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 C4orf51C9J302 202 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 C12orf77C9JDV5 145 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 NDUFC2-KCTD14E9PQ53 114 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 H3BRM9 83 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 M0R2P5 195 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 M0R381 172 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 FFAR1O14842 300 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 PSPHP1O15172 72 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 RTL8CO15255 209 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 NDUFB3O43676 98 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 HYPMO75409 117 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 NDUFB6O95139 128 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 HLA-DQB1P01920 261 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 CD3DP04234 171 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 TCRAP04437 139 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 SFTA3P0C7M3 94 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 CRYGAP11844 174 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 SLC25A4P12235 298 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 LGALS3P17931 250 aaKnown RBP2.08□□□□□ -2.08
CNOT1-223ENST00000628857 ELK1P19419 428 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 KRTAP5-9P26371 169 aa2.08□□□□□ -2.08
CNOT1-223ENST00000628857 PSMB3P49720 205 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms