RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 LYZP61626 148 aa7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 SPATA45Q537H7 98 aa7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 ASPHD1Q5U4P2 390 aa7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 RBPMS2Q6ZRY4 209 aaKnown RBP7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 TCF24Q7RTU0 167 aa7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 FAM19A2Q8N3H0 131 aa7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 GATD1Q8NB37 220 aa7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 LINC01560Q8TB33 94 aa7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 GTSF1Q8WW33 167 aa7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 CFHR4Q92496 578 aa7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 DAZAP1Q96EP5 407 aaKnown RBP7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 ZNF48Q96MX3 618 aaPredicted RBP7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 RASL11BQ9BPW5 248 aa7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 UQCR10Q9UDW1 63 aa7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 RPH3ALQ9UNE2 315 aa7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 NAV3Q8IVL0 2385 aa7.62□□□□□ -1.19
IGHV3-54-201ENST00000622166 MALRD1Q5VYJ5 2156 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 TRAV30A0A087WSZ9 112 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 WI2-2373I1.2A0A1W2PRP0 233 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 M0R1W7 72 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 OVOL3O00110 214 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 HAX1O00165 279 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 TIMM23O14925 209 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 MRPS12O15235 138 aaKnown RBP7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 NBR2O15453 112 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 IGLC2P0DOY2 106 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 IGLC3P0DOY3 106 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 NTF3P20783 257 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 GPR6P46095 362 aaPredicted RBP7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 CAMPP49913 170 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 FOXA3P55318 350 aaPredicted RBP7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 DLX1P56177 255 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 LDLRAD2Q5SZI1 272 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 LEMD1Q68G75 181 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 LHFPL4Q7Z7J7 247 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 KLHDC1Q8N7A1 406 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 TMEM75Q8N9X5 138 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 CHCHD1Q96BP2 118 aaKnown RBP7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 URB1-AS1Q96HZ7 61 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 DPM3Q9P2X0 92 aa7.61□□□□□ -1.19
IGHV3-54-201ENST00000622166 TRBV19A0A075B6N1 114 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 FAM181BA6NEQ2 426 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 C2orf70A6NJV1 201 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 A6NNC1 897 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 ZNF785A8K8V0 405 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 ODF3BA8MYP8 253 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 H3BTX0 84 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 M0R2Z0 102 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 APOHP02749 345 aaPredicted RBP7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 APELAP0DMC3 54 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 BTF3P20290 206 aaKnown RBP7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 HTR1DP28221 377 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 CEACAM3P40198 252 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 GAGE1Q13065 139 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 PLGLAQ15195 96 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 EBLN2Q6P2I7 272 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 S100A7AQ86SG5 101 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 BPIFA4PQ86YQ2 179 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 PGLYRP4Q96LB8 373 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 SGK494Q96LW2 274 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 NDFIP1Q9BT67 221 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 SSBP4Q9BWG4 385 aaPredicted RBP7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 RAB1BQ9H0U4 201 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 ONECUT1Q9UBC0 465 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 ZFP30Q9Y2G7 519 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 EP300Q09472 2414 aaPredicted RBP7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 PLXNB1O43157 2135 aa7.6□□□□□ -1.19
IGHV3-54-201ENST00000622166 TRAV9-2A0A087WT02 112 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 LOC102724200A0A096LPH7 203 aaPredicted RBP7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 A0A1B0GW15 77 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 NPIPB5A8MRT5 1133 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 CNIH1O95406 144 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 HLA-DRB1P01911 266 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 PRTN3P24158 256 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 PRB3Q04118 309 aaPredicted RBP7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 FOXC1Q12948 553 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 FAM120AOSQ5T036 256 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 RNASEKQ6P5S7 137 aaKnown RBP7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 SIGLEC15Q6ZMC9 328 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 GOLT1AQ6ZVE7 132 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 PRNTQ86SH4 94 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 ARL6IP6Q8N6S5 226 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 ZNF491Q8N8L2 437 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 OR4F17Q8NGA8 305 aa7.59□□□□□ -1.19
IGHV3-54-201ENST00000622166 CNOT1A5YKK6 2376 aaKnown RBP7.59□□□□□ -1.2
IGHV3-54-201ENST00000622166 COL6A3P12111 3177 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 IGLV11-55A0A075B6I3 123 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 FAM90A27PA6NNH2 459 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 OOSP1A8MZH6 123 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 OR5AL1P0C617 328 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 ZNF25P17030 456 aaPredicted RBP7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 COL8A1P27658 744 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 ZNF124Q15973 351 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 C5orf64Q2M2E5 130 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 COL5A1-AS1Q5SY13 56 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 C11orf71Q6IPW1 123 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 C1orf122Q6ZSJ8 110 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 EXOC3-AS1Q8N2X6 119 aa7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 CIARTQ8N365 385 aaPredicted RBP7.58□□□□□ -1.2
IGHV3-54-201ENST00000622166 OR2D3Q8NGH3 330 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms