RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 ACANP16112 2415 aa17.34■□□□□ 0.37
PPFIA3-211ENST00000602848 TMEM89A2RUT3 159 aa17.33■□□□□ 0.37
PPFIA3-211ENST00000602848 OR2T8A6NH00 312 aa17.33■□□□□ 0.37
PPFIA3-211ENST00000602848 TRGV3P03979 118 aa17.33■□□□□ 0.37
PPFIA3-211ENST00000602848 IL4P05112 153 aa17.33■□□□□ 0.37
PPFIA3-211ENST00000602848 AWAT1Q58HT5 328 aa17.33■□□□□ 0.37
PPFIA3-211ENST00000602848 FXYD5Q96DB9 178 aa17.33■□□□□ 0.37
PPFIA3-211ENST00000602848 MS4A10Q96PG2 267 aa17.33■□□□□ 0.37
PPFIA3-211ENST00000602848 SMIM7Q9BQ49 75 aa17.33■□□□□ 0.37
PPFIA3-211ENST00000602848 PRSS22Q9GZN4 317 aa17.33■□□□□ 0.37
PPFIA3-211ENST00000602848 HIVEP1P15822 2718 aa17.33■□□□□ 0.37
PPFIA3-211ENST00000602848 C7orf77A4D0Y5 90 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 IGLV1-40P01703 118 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 CLEC3BP05452 202 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 OR10J4P0C629 311 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 TMEM241Q24JQ0 296 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 C11orf52Q96A22 123 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 TCEAL7Q9BRU2 100 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 PARLQ9H300 379 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 SDF2L1Q9HCN8 221 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 H3BRN7 92 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 DNASE2O00115 360 aaPredicted RBP17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 IGHV3-23P01764 117 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 ADMP35318 185 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 CFHR3Q02985 330 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 NPFFR1Q9GZQ6 430 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 LINC00527Q9UJ94 153 aa17.32■□□□□ 0.36
PPFIA3-211ENST00000602848 A0A0G2JLM5 398 aa17.31■□□□□ 0.36
PPFIA3-211ENST00000602848 HOXA3O43365 443 aaPredicted RBP17.31■□□□□ 0.36
PPFIA3-211ENST00000602848 KRTAP1-1Q07627 177 aa17.31■□□□□ 0.36
PPFIA3-211ENST00000602848 RPUSD4Q96CM3 377 aaKnown RBP17.31■□□□□ 0.36
PPFIA3-211ENST00000602848 CCDC140Q96MF4 163 aa17.31■□□□□ 0.36
PPFIA3-211ENST00000602848 CHRDL1Q9BU40 450 aa17.31■□□□□ 0.36
PPFIA3-211ENST00000602848 TGOLN2O43493 480 aa17.3■□□□□ 0.36
PPFIA3-211ENST00000602848 GP9P14770 177 aa17.3■□□□□ 0.36
PPFIA3-211ENST00000602848 NPPCP23582 126 aa17.3■□□□□ 0.36
PPFIA3-211ENST00000602848 GPR183P32249 361 aa17.3■□□□□ 0.36
PPFIA3-211ENST00000602848 SRP14P37108 136 aaKnown RBP17.3■□□□□ 0.36
PPFIA3-211ENST00000602848 RELQ04864 619 aaPredicted RBP17.3■□□□□ 0.36
PPFIA3-211ENST00000602848 FAM209BQ5JX69 171 aa17.3■□□□□ 0.36
PPFIA3-211ENST00000602848 ZNF343Q6P1L6 599 aa17.3■□□□□ 0.36
PPFIA3-211ENST00000602848 Q6ZS46 218 aa17.3■□□□□ 0.36
PPFIA3-211ENST00000602848 NOL4LQ96MY1 436 aaPredicted RBP17.3■□□□□ 0.36
PPFIA3-211ENST00000602848 RPS10P5Q9NQ39 176 aa17.3■□□□□ 0.36
PPFIA3-211ENST00000602848 A0A087WWC5 75 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 PYYP10082 97 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 HNF1AP20823 631 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 TPPP2P59282 170 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 SMCO4Q9NRQ5 59 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 CSPG4Q6UVK1 2322 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 ZANQ9Y493 2812 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 BMPR1BO00238 502 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 NDUFB4O95168 129 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 NBEAP1P0C6P0 100 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 HIST1H1EP10412 219 aaKnown RBP17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 SCGB2A2Q13296 93 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 KIAA0141Q14154 515 aaPredicted RBP17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 ZNF674Q2M3X9 581 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 CLEC19AQ6UXS0 136 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 BPIFA4PQ86YQ2 179 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 TUBA4BQ9H853 241 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 TMEM160Q9NX00 188 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 PRELID1Q9Y255 219 aa17.29■□□□□ 0.36
PPFIA3-211ENST00000602848 F8P00451 2351 aa17.28■□□□□ 0.36
PPFIA3-211ENST00000602848 IGHG4P01861 327 aa17.28■□□□□ 0.36
PPFIA3-211ENST00000602848 USF2Q15853 346 aaPredicted RBP17.28■□□□□ 0.36
PPFIA3-211ENST00000602848 SIGLECL1Q8N7X8 197 aa17.28■□□□□ 0.36
PPFIA3-211ENST00000602848 C20orf24Q9BUV8 137 aa17.28■□□□□ 0.36
PPFIA3-211ENST00000602848 YAE1D1Q9NRH1 226 aa17.28■□□□□ 0.36
PPFIA3-211ENST00000602848 RAB9AP51151 201 aa17.27■□□□□ 0.36
PPFIA3-211ENST00000602848 SUMO1P63165 101 aaKnown RBP17.27■□□□□ 0.36
PPFIA3-211ENST00000602848 RABAC1Q9UI14 185 aa17.27■□□□□ 0.36
PPFIA3-211ENST00000602848 ZNF98A6NK75 572 aa17.26■□□□□ 0.35
PPFIA3-211ENST00000602848 PF4V1P10720 104 aa17.26■□□□□ 0.35
PPFIA3-211ENST00000602848 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.25■□□□□ 0.35
PPFIA3-211ENST00000602848 SCO2A0A1W2PP80 73 aa17.25■□□□□ 0.35
PPFIA3-211ENST00000602848 GGTLC3B5MD39 225 aa17.25■□□□□ 0.35
PPFIA3-211ENST00000602848 MYCNOSP40205 109 aa17.25■□□□□ 0.35
PPFIA3-211ENST00000602848 TOMM20LQ6UXN7 152 aa17.25■□□□□ 0.35
PPFIA3-211ENST00000602848 Q8N2B8 174 aa17.25■□□□□ 0.35
PPFIA3-211ENST00000602848 OR4F17Q8NGA8 305 aa17.25■□□□□ 0.35
PPFIA3-211ENST00000602848 SLC35B1P78383 322 aa17.25■□□□□ 0.35
PPFIA3-211ENST00000602848 ZNF702PQ9H963 129 aa17.25■□□□□ 0.35
PPFIA3-211ENST00000602848 TMEM242Q9NWH2 141 aa17.25■□□□□ 0.35
PPFIA3-211ENST00000602848 LY96Q9Y6Y9 160 aa17.25■□□□□ 0.35
PPFIA3-211ENST00000602848 LEMD1Q68G75 181 aa17.24■□□□□ 0.35
PPFIA3-211ENST00000602848 ZFAND3Q9H8U3 227 aa17.24■□□□□ 0.35
PPFIA3-211ENST00000602848 C9JCJ5 164 aa17.23■□□□□ 0.35
PPFIA3-211ENST00000602848 PSMB8P28062 276 aa17.23■□□□□ 0.35
PPFIA3-211ENST00000602848 RPL23P62829 140 aaKnown RBP17.23■□□□□ 0.35
PPFIA3-211ENST00000602848 TMEM88Q6PEY1 159 aa17.23■□□□□ 0.35
PPFIA3-211ENST00000602848 ZNF329Q86UD4 541 aa17.23■□□□□ 0.35
PPFIA3-211ENST00000602848 LYPD1Q8N2G4 141 aa17.23■□□□□ 0.35
PPFIA3-211ENST00000602848 HIST1H2BAQ96A08 127 aa17.23■□□□□ 0.35
PPFIA3-211ENST00000602848 ZNF414Q96IQ9 312 aa17.23■□□□□ 0.35
PPFIA3-211ENST00000602848 CTDSP1Q9GZU7 261 aa17.23■□□□□ 0.35
PPFIA3-211ENST00000602848 GNB4Q9HAV0 340 aa17.23■□□□□ 0.35
PPFIA3-211ENST00000602848 CXorf65A6NEN9 183 aa17.22■□□□□ 0.35
PPFIA3-211ENST00000602848 RPL7P18124 248 aaKnown RBP17.22■□□□□ 0.35
PPFIA3-211ENST00000602848 CRYBB3P26998 211 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms