RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 KLF5Q13887 457 aaPredicted RBP4.87□□□□□ -1.63
VPS4B-205ENST00000591383 GAMTQ14353 236 aa4.87□□□□□ -1.63
VPS4B-205ENST00000591383 CLINT1Q14677 625 aa4.87□□□□□ -1.63
VPS4B-205ENST00000591383 C9orf66Q5T8R8 295 aa4.87□□□□□ -1.63
VPS4B-205ENST00000591383 ZNF600Q6ZNG1 722 aa4.87□□□□□ -1.63
VPS4B-205ENST00000591383 OR10P1Q8NGE3 313 aa4.87□□□□□ -1.63
VPS4B-205ENST00000591383 OR2T35Q8NGX2 323 aa4.87□□□□□ -1.63
VPS4B-205ENST00000591383 THAP6Q8TBB0 222 aa4.87□□□□□ -1.63
VPS4B-205ENST00000591383 ATP6V0BQ99437 205 aa4.87□□□□□ -1.63
VPS4B-205ENST00000591383 TXN2Q99757 166 aa4.87□□□□□ -1.63
VPS4B-205ENST00000591383 PBDC1Q9BVG4 233 aa4.87□□□□□ -1.63
VPS4B-205ENST00000591383 TMEM147Q9BVK8 224 aa4.87□□□□□ -1.63
VPS4B-205ENST00000591383 DAZ1Q9NQZ3 744 aaKnown RBP4.87□□□□□ -1.63
VPS4B-205ENST00000591383 UFC1Q9Y3C8 167 aa4.87□□□□□ -1.63
VPS4B-205ENST00000591383 PUS1Q9Y606 427 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS4B-205ENST00000591383 IGHV3OR16-13A0A075B7E8 117 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 TRAV30A0A087WSZ9 112 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 TRAV14DV4A0A0A6YYC5 116 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 IGHV3-74A0A0B4J1X5 117 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 IGHV3-66A0A0C4DH42 116 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 TMEM213A2RRL7 107 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 C2orf70A6NJV1 201 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 A8MWP6 167 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 PRSS46E5RG02 174 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 SMLR1H3BR10 107 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 IGKV1-17P01599 117 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 IL4P05112 153 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 FABP1P07148 127 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 CTSGP08311 255 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 FGF7P21781 194 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 FCGR2BP31994 310 aaPredicted RBP4.86□□□□□ -1.63
VPS4B-205ENST00000591383 NUP62P37198 522 aaPredicted RBP4.86□□□□□ -1.63
VPS4B-205ENST00000591383 P2RY1P47900 373 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 SULT1A1P50225 295 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 ARL16Q0P5N6 197 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 IL15RAQ13261 267 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 BTNL8Q6UX41 500 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 TOMM20LQ6UXN7 152 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 TMEM252Q8N6L7 170 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 OR5C1Q8NGR4 320 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 PPP1R14BQ96C90 147 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 NARS2Q96I59 477 aaKnown RBP4.86□□□□□ -1.63
VPS4B-205ENST00000591383 GINS3Q9BRX5 216 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 SMIM3Q9BZL3 60 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 SLC25A31Q9H0C2 315 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 C11orf1Q9H5F2 150 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 UQCC1Q9NVA1 299 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 DOK5Q9P104 306 aa4.86□□□□□ -1.63
VPS4B-205ENST00000591383 LSM4Q9Y4Z0 139 aaKnown RBP4.86□□□□□ -1.63
VPS4B-205ENST00000591383 IGKV1D-37A0A075B6S9 117 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 LGALS9O00182 355 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 JTBO76095 146 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 TOMM40O96008 361 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 PRB2P02812 416 aaPredicted RBP4.85□□□□□ -1.63
VPS4B-205ENST00000591383 CSN3P07498 182 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 LINC00869P0C866 280 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 RD3LP0DJH9 198 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 FOLR2P14207 255 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 RPL12P30050 165 aaKnown RBP4.85□□□□□ -1.63
VPS4B-205ENST00000591383 BMI1P35226 326 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 ZNF90Q03938 601 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 FGL1Q08830 312 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 ZNF546Q86UE3 836 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 GPHB5Q86YW7 130 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 THAP8Q8NA92 274 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 OR51G1Q8NGK1 321 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 Q8WTZ3 238 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 ASB13Q8WXK3 278 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 METTL26Q96S19 204 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 TRGV9Q99603 122 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 HRH4Q9H3N8 390 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 HSPB11Q9Y547 144 aa4.85□□□□□ -1.63
VPS4B-205ENST00000591383 IGKV1OR2-108A0A075B7D4 117 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 IGHV7-4-1A0A0J9YVY3 117 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 PMS2P5A8MQ11 134 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 ARPC5O15511 151 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 COX7A2P2O60397 106 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 PSG1P11464 419 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 HOXA5P20719 270 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 GATA2P23769 480 aaPredicted RBP4.84□□□□□ -1.63
VPS4B-205ENST00000591383 S100A11P31949 105 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 AP2S1P53680 142 aaPredicted RBP4.84□□□□□ -1.63
VPS4B-205ENST00000591383 YPEL3P61236 119 aaPredicted RBP4.84□□□□□ -1.63
VPS4B-205ENST00000591383 USF2Q15853 346 aaPredicted RBP4.84□□□□□ -1.63
VPS4B-205ENST00000591383 GUCA2BQ16661 112 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 Q5BKY6 102 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 LCN12Q6JVE5 192 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 CYP2G1PQ6ZSU1 146 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 TMEM144Q7Z5S9 345 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 AKAP14Q86UN6 197 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 INO80EQ8NBZ0 244 aaPredicted RBP4.84□□□□□ -1.63
VPS4B-205ENST00000591383 WFDC9Q8NEX5 89 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 BPIFCQ8NFQ6 507 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 OR1B1Q8NGR6 318 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 ZNF503Q96F45 646 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 ZNF414Q96IQ9 312 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 MGST2Q99735 147 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 ATP5SQ99766 215 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 GGACTQ9BVM4 153 aa4.84□□□□□ -1.63
VPS4B-205ENST00000591383 KRTAP3-1Q9BYR8 98 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms