RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 FAM223AQ8IWN6 122 aa15.46■□□□□ 0.07
TRIM47-204ENST00000587339 CHRDL1Q9BU40 450 aa15.46■□□□□ 0.07
TRIM47-204ENST00000587339 HECTD1Q9ULT8 2610 aa15.45■□□□□ 0.06
TRIM47-204ENST00000587339 TRBV7-1A0A0A6YYK4 115 aa15.45■□□□□ 0.06
TRIM47-204ENST00000587339 HOXA3O43365 443 aaPredicted RBP15.45■□□□□ 0.06
TRIM47-204ENST00000587339 TRGV3P03979 118 aa15.45■□□□□ 0.06
TRIM47-204ENST00000587339 ADMP35318 185 aa15.45■□□□□ 0.06
TRIM47-204ENST00000587339 ATP5G2Q06055 141 aa15.45■□□□□ 0.06
TRIM47-204ENST00000587339 PNRC1Q12796 327 aaPredicted RBP15.45■□□□□ 0.06
TRIM47-204ENST00000587339 CBLN2Q8IUK8 224 aa15.45■□□□□ 0.06
TRIM47-204ENST00000587339 FASNP49327 2511 aaKnown RBP15.45■□□□□ 0.06
TRIM47-204ENST00000587339 A0A1W2PRE2 83 aa15.45■□□□□ 0.06
TRIM47-204ENST00000587339 NDUFB4O95168 129 aa15.45■□□□□ 0.06
TRIM47-204ENST00000587339 IL17RELQ6ZVW7 336 aa15.45■□□□□ 0.06
TRIM47-204ENST00000587339 FXYD5Q96DB9 178 aa15.45■□□□□ 0.06
TRIM47-204ENST00000587339 CCDC140Q96MF4 163 aa15.45■□□□□ 0.06
TRIM47-204ENST00000587339 FLNAP21333 2647 aaKnown RBP15.45■□□□□ 0.06
TRIM47-204ENST00000587339 SCO2A0A1W2PP80 73 aa15.44■□□□□ 0.06
TRIM47-204ENST00000587339 H3BUA1 57 aa15.44■□□□□ 0.06
TRIM47-204ENST00000587339 USF2Q15853 346 aaPredicted RBP15.44■□□□□ 0.06
TRIM47-204ENST00000587339 TMEM241Q24JQ0 296 aa15.44■□□□□ 0.06
TRIM47-204ENST00000587339 CLEC19AQ6UXS0 136 aa15.44■□□□□ 0.06
TRIM47-204ENST00000587339 S100A7AQ86SG5 101 aa15.44■□□□□ 0.06
TRIM47-204ENST00000587339 SDF2L1Q9HCN8 221 aa15.44■□□□□ 0.06
TRIM47-204ENST00000587339 NAT8Q9UHE5 227 aa15.44■□□□□ 0.06
TRIM47-204ENST00000587339 BRI3O95415 125 aa15.43■□□□□ 0.06
TRIM47-204ENST00000587339 TPPP2P59282 170 aa15.43■□□□□ 0.06
TRIM47-204ENST00000587339 SHANK2-AS3Q9BTD1 123 aa15.43■□□□□ 0.06
TRIM47-204ENST00000587339 MXRA5Q9NR99 2828 aa15.43■□□□□ 0.06
TRIM47-204ENST00000587339 GGTLC3B5MD39 225 aa15.43■□□□□ 0.06
TRIM47-204ENST00000587339 GP9P14770 177 aa15.43■□□□□ 0.06
TRIM47-204ENST00000587339 SUMO1P63165 101 aaKnown RBP15.43■□□□□ 0.06
TRIM47-204ENST00000587339 ZNF580Q9UK33 172 aa15.43■□□□□ 0.06
TRIM47-204ENST00000587339 H3BRN7 92 aa15.42■□□□□ 0.06
TRIM47-204ENST00000587339 SNRPCP09234 159 aaKnown RBP15.42■□□□□ 0.06
TRIM47-204ENST00000587339 ZNF600Q6ZNG1 722 aa15.42■□□□□ 0.06
TRIM47-204ENST00000587339 DERL1Q9BUN8 251 aa15.42■□□□□ 0.06
TRIM47-204ENST00000587339 CD5LO43866 347 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 SRP14P37108 136 aaKnown RBP15.41■□□□□ 0.06
TRIM47-204ENST00000587339 KRTAP1-1Q07627 177 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 ATP6V0BQ99437 205 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 GNB4Q9HAV0 340 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 SMCO4Q9NRQ5 59 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 IGHV3-35A0A0C4DH35 117 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 B4DEV8 164 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 TGOLN2O43493 480 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 NBEAP1P0C6P0 100 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 PF4V1P10720 104 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 TMEM95Q3KNT9 176 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 SIGLECL1Q8N7X8 197 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 BLNKQ8WV28 456 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 C11orf52Q96A22 123 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 TMEM14CQ9P0S9 112 aa15.41■□□□□ 0.06
TRIM47-204ENST00000587339 IGLV1-40P01703 118 aa15.4■□□□□ 0.06
TRIM47-204ENST00000587339 CFHR3Q02985 330 aa15.4■□□□□ 0.06
TRIM47-204ENST00000587339 ZNF343Q6P1L6 599 aa15.4■□□□□ 0.06
TRIM47-204ENST00000587339 USMG5Q96IX5 58 aa15.4■□□□□ 0.06
TRIM47-204ENST00000587339 PRSS22Q9GZN4 317 aa15.4■□□□□ 0.06
TRIM47-204ENST00000587339 NPFFR1Q9GZQ6 430 aa15.4■□□□□ 0.06
TRIM47-204ENST00000587339 ADIRFQ15847 76 aa15.39■□□□□ 0.05
TRIM47-204ENST00000587339 BPIFA4PQ86YQ2 179 aa15.39■□□□□ 0.05
TRIM47-204ENST00000587339 KLK15Q9H2R5 256 aa15.39■□□□□ 0.05
TRIM47-204ENST00000587339 TLN2Q9Y4G6 2542 aa15.39■□□□□ 0.05
TRIM47-204ENST00000587339 ZNF98A6NK75 572 aa15.39■□□□□ 0.05
TRIM47-204ENST00000587339 BMPR1BO00238 502 aa15.39■□□□□ 0.05
TRIM47-204ENST00000587339 CRYBB3P26998 211 aa15.39■□□□□ 0.05
TRIM47-204ENST00000587339 RANP62826 216 aaKnown RBP15.39■□□□□ 0.05
TRIM47-204ENST00000587339 YAE1D1Q9NRH1 226 aa15.39■□□□□ 0.05
TRIM47-204ENST00000587339 A0A087WWC5 75 aa15.38■□□□□ 0.05
TRIM47-204ENST00000587339 TSPAN4O14817 238 aa15.38■□□□□ 0.05
TRIM47-204ENST00000587339 RPL23P62829 140 aaKnown RBP15.38■□□□□ 0.05
TRIM47-204ENST00000587339 TOMM20LQ6UXN7 152 aa15.38■□□□□ 0.05
TRIM47-204ENST00000587339 ELOVL1Q9BW60 279 aa15.38■□□□□ 0.05
TRIM47-204ENST00000587339 RABAC1Q9UI14 185 aa15.38■□□□□ 0.05
TRIM47-204ENST00000587339 HIST1H1EP10412 219 aaKnown RBP15.37■□□□□ 0.05
TRIM47-204ENST00000587339 RELQ04864 619 aaPredicted RBP15.37■□□□□ 0.05
TRIM47-204ENST00000587339 ZNF329Q86UD4 541 aa15.37■□□□□ 0.05
TRIM47-204ENST00000587339 DUX5Q96PT3 197 aa15.37■□□□□ 0.05
TRIM47-204ENST00000587339 A0A0G2JLM5 398 aa15.37■□□□□ 0.05
TRIM47-204ENST00000587339 RAB9AP51151 201 aa15.37■□□□□ 0.05
TRIM47-204ENST00000587339 OR4F17Q8NGA8 305 aa15.37■□□□□ 0.05
TRIM47-204ENST00000587339 ZNF414Q96IQ9 312 aa15.37■□□□□ 0.05
TRIM47-204ENST00000587339 RNF24Q9Y225 148 aa15.37■□□□□ 0.05
TRIM47-204ENST00000587339 PRELID1Q9Y255 219 aa15.37■□□□□ 0.05
TRIM47-204ENST00000587339 IGHV3OR16-8A0A075B7F1 116 aa15.36■□□□□ 0.05
TRIM47-204ENST00000587339 PPP5D1E7EU14 171 aa15.36■□□□□ 0.05
TRIM47-204ENST00000587339 S100A7P31151 101 aa15.36■□□□□ 0.05
TRIM47-204ENST00000587339 RPL35P42766 123 aaKnown RBP15.36■□□□□ 0.05
TRIM47-204ENST00000587339 ZFAND3Q9H8U3 227 aa15.36■□□□□ 0.05
TRIM47-204ENST00000587339 TRBV20OR9-2A0A075B6H5 130 aa15.35■□□□□ 0.05
TRIM47-204ENST00000587339 H3BTX0 84 aa15.35■□□□□ 0.05
TRIM47-204ENST00000587339 IGHG4P01861 327 aa15.35■□□□□ 0.05
TRIM47-204ENST00000587339 MYCNOSP40205 109 aa15.35■□□□□ 0.05
TRIM47-204ENST00000587339 LCNL1Q6ZST4 164 aa15.35■□□□□ 0.05
TRIM47-204ENST00000587339 TUBA4BQ9H853 241 aa15.35■□□□□ 0.05
TRIM47-204ENST00000587339 ZNF702PQ9H963 129 aa15.35■□□□□ 0.05
TRIM47-204ENST00000587339 ZNF586Q9NXT0 402 aa15.35■□□□□ 0.05
TRIM47-204ENST00000587339 HELTA6NFD8 242 aa15.35■□□□□ 0.05
TRIM47-204ENST00000587339 HNF1AP20823 631 aa15.35■□□□□ 0.05
TRIM47-204ENST00000587339 ARL3P36405 182 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms